##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224557_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 998234 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.16333244509804 34.0 33.0 34.0 31.0 34.0 2 33.287615929731906 34.0 33.0 34.0 31.0 34.0 3 33.4035186138721 34.0 34.0 34.0 31.0 34.0 4 36.62222384731436 37.0 37.0 37.0 35.0 37.0 5 36.65360626867047 37.0 37.0 37.0 35.0 37.0 6 36.69801269041127 37.0 37.0 37.0 36.0 37.0 7 36.67924654940625 37.0 37.0 37.0 36.0 37.0 8 36.668009705139276 37.0 37.0 37.0 35.0 37.0 9 38.51318829052106 39.0 39.0 39.0 37.0 39.0 10-11 38.536956264763575 39.0 39.0 39.0 37.5 39.0 12-13 38.514161008340736 39.0 39.0 39.0 37.0 39.0 14-15 40.11140774607958 41.0 40.0 41.0 38.0 41.0 16-17 40.12170493090798 41.0 40.0 41.0 38.0 41.0 18-19 40.108745043747255 41.0 40.0 41.0 38.0 41.0 20-21 40.104602728418385 41.0 40.0 41.0 38.0 41.0 22-23 40.03228201002971 41.0 40.0 41.0 38.0 41.0 24-25 39.990089998938124 41.0 40.0 41.0 38.0 41.0 26-27 39.916685867241554 41.0 40.0 41.0 38.0 41.0 28-29 39.89261485783894 41.0 40.0 41.0 38.0 41.0 30-31 39.83974348699804 41.0 40.0 41.0 38.0 41.0 32-33 39.80320546084385 41.0 40.0 41.0 37.0 41.0 34-35 39.72626859033052 41.0 40.0 41.0 37.0 41.0 36-37 39.60107800375463 41.0 40.0 41.0 37.0 41.0 38-39 39.47746971151053 41.0 39.5 41.0 36.0 41.0 40-41 39.33104612746109 41.0 39.0 41.0 35.5 41.0 42-43 39.21755620425672 41.0 39.0 41.0 35.0 41.0 44-45 38.95011540380312 40.5 38.5 41.0 35.0 41.0 46-47 38.70707118771751 40.0 38.0 41.0 35.0 41.0 48-49 38.57561703969209 40.0 37.5 41.0 35.0 41.0 50-51 38.3757686073606 40.0 37.0 41.0 35.0 41.0 52-53 38.08152296956425 40.0 36.0 41.0 35.0 41.0 54-55 37.84214723201173 39.0 35.5 41.0 34.0 41.0 56-57 37.56939805696861 39.0 35.0 41.0 34.0 41.0 58-59 37.26900005409553 38.5 35.0 41.0 34.0 41.0 60-61 36.98836094542963 37.5 35.0 41.0 33.0 41.0 62-63 36.76629026861437 37.0 35.0 40.5 33.0 41.0 64-65 36.505446618728676 36.5 35.0 40.0 33.0 41.0 66-67 36.23891742817816 36.0 35.0 40.0 33.0 41.0 68-69 35.98547835477453 35.5 35.0 39.0 33.0 41.0 70-71 35.71849736634897 35.0 35.0 39.0 33.0 41.0 72-73 35.448423916636784 35.0 35.0 38.5 33.0 41.0 74-75 35.172327830949456 35.0 35.0 37.0 32.0 40.0 76-77 33.39042949849434 34.5 32.0 35.5 29.0 38.5 78-79 34.70724449377601 35.0 34.5 36.0 32.0 39.0 80-81 34.65726222508951 35.0 35.0 36.0 33.0 38.5 82-83 34.48218153258655 35.0 35.0 36.0 33.0 37.0 84-85 34.3100956288806 35.0 35.0 35.5 32.5 37.0 86-87 34.150700637325514 35.0 35.0 35.0 32.0 36.5 88-89 34.02948907771124 35.0 35.0 35.0 32.0 36.0 90-91 33.8919156229902 35.0 34.5 35.0 32.0 36.0 92-93 33.813626865043666 35.0 34.0 35.0 32.0 36.0 94-95 33.72354628273531 35.0 34.0 35.0 31.5 35.5 96-97 33.69062464311975 35.0 34.0 35.0 31.0 35.0 98-99 33.66892381946518 35.0 34.0 35.0 31.0 35.0 100-101 32.81375459060701 34.5 33.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 0.0 12 0.0 13 2.0 14 13.0 15 34.0 16 88.0 17 194.0 18 372.0 19 538.0 20 793.0 21 1121.0 22 1649.0 23 1869.0 24 1924.0 25 2531.0 26 3382.0 27 4834.0 28 6467.0 29 7515.0 30 7775.0 31 8492.0 32 10184.0 33 13740.0 34 25231.0 35 54065.0 36 159212.0 37 306162.0 38 288874.0 39 91166.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.71738561565249 18.451559008836732 13.004891402806015 23.826163972704766 2 16.57046343843227 19.079193856350315 38.44489368224284 25.905449022974576 3 20.405135469238676 26.050405015256946 27.704926900907 25.839532614597378 4 13.264024266855268 16.009372551926702 37.82109204855775 32.90551113266027 5 13.920383397079242 38.278299476876164 34.12135831879098 13.679958807253609 6 31.199097606372856 35.389497853208766 19.025098323639547 14.386306216778832 7 28.340549410258514 30.222372710206223 21.658548997529635 19.778528882005624 8 27.01851469695482 33.56427450878251 19.616843345347885 19.800367448914784 9 27.306823850920726 15.08443911948501 19.274639012496067 38.33409801709819 10-11 27.52556013920584 24.03053792998435 26.605936083122796 21.837965847687016 12-13 27.529817657984 22.161086478721423 26.886080818725873 23.42301504456871 14-15 24.409657455065645 24.316943722614138 24.16197003908903 27.111428783231183 16-17 24.1259564390714 26.942931216528386 25.419040024683593 23.51207231971662 18-19 24.167129150079038 26.105903024741693 26.278908552503722 23.448059272675543 20-21 25.175962156866284 24.669513717334553 26.02151216257641 24.13301196322276 22-23 25.589071780554047 25.145583702238877 25.16126156179531 24.10408295541177 24-25 25.203510213077145 24.868867896176234 25.3165603117518 24.61106157899482 26-27 24.5326161872781 26.406859837950904 25.557995463907613 23.502528510863378 28-29 24.167750286015398 26.273294476646917 26.2153901330197 23.34356510431798 30-31 24.28772427900882 25.092701906831767 26.140209661835268 24.479364152324145 32-33 24.311496258140007 25.500446538810813 26.418618489561812 23.769438713487375 34-35 25.18032458425165 24.863404127429373 25.446553796834305 24.509717491484672 36-37 23.885387646173125 25.072153649957873 26.263427691574076 24.779031012294922 38-39 24.27436853483251 25.426302850834574 25.390088896992086 24.90923971734082 40-41 24.528016477098554 25.342154244395605 25.997711959320156 24.13211731918568 42-43 24.58656988241234 25.45024513290471 26.031471578808173 23.931713405874774 44-45 24.811275293118147 24.83617142565173 25.79800370085769 24.55454958037243 46-47 24.536448258005912 24.666983145259163 25.835330540501655 24.961238056233267 48-49 23.983398582287812 24.854241716321322 26.3048121270892 24.857547574301663 50-51 24.576301748888536 25.02399237052635 25.939358907831227 24.460346972753882 52-53 24.53989973287813 25.413492935270156 25.233725375876485 24.81288195597523 54-55 24.793886002680736 24.580208648473203 25.625955437302277 24.999949911543787 56-57 25.04070001011865 24.86377393536287 25.387990065691067 24.70753598882741 58-59 25.018276895849002 25.049494184715154 25.758773035277542 24.173455884158304 60-61 24.518242429738628 25.713310843547347 25.312282519544116 24.45616420716991 62-63 24.10757397564098 25.011670610297788 26.06833668258144 24.812418731479795 64-65 24.64296948410894 24.58521749409457 25.526529851718134 25.24528317007836 66-67 24.18651338263373 25.03866828819696 25.230657340863967 25.544160988305347 68-69 24.67682928050938 24.98527399387318 26.092629583845074 24.24526714177237 70-71 25.05294349821785 24.88449601997127 25.786438851010885 24.27612163079999 72-73 24.259943059442975 25.18998551441846 26.041238827769842 24.50883259836872 74-75 24.573396618428145 24.661502212907997 25.997711959320156 24.7673892093437 76-77 24.58183526658659 23.993694846182898 25.792827511868495 25.63164237536202 78-79 24.69570305005753 23.975629194273672 25.670745665906768 25.657922089762025 80-81 23.995736246364014 25.220663777078617 25.606815994886702 25.17678398167067 82-83 23.708394253997973 25.197938940589015 26.207331116397164 24.886335689015848 84-85 24.312884968997114 24.266452016527527 26.391999306761534 25.028663707713832 86-87 23.964270902413663 25.676845308815366 25.751076400924035 24.60780738784694 88-89 24.6040006651747 24.381407565761133 25.063962958584863 25.950628810479305 90-91 24.429141864532763 24.56818741898192 25.21748407687977 25.785186639605545 92-93 24.422003680503447 24.828171378826386 25.90201886733859 24.847806073331576 94-95 24.392176583847075 24.331068667266393 25.80837759483248 25.46837715405406 96-97 24.81847943468165 24.879086466700194 25.759691615392782 24.54274248322538 98-99 22.95503859816436 25.348164859141242 26.311265695217756 25.385530847476645 100-101 23.929149459693953 24.86279950658447 25.53094548420033 25.677105549521244 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 3.5 3 6.0 4 4.5 5 3.0 6 4.5 7 6.0 8 15.0 9 21.5 10 21.0 11 22.5 12 25.5 13 29.0 14 31.5 15 32.5 16 33.5 17 41.0 18 53.5 19 60.0 20 56.0 21 73.0 22 104.5 23 124.5 24 159.0 25 217.5 26 309.5 27 410.5 28 504.5 29 663.5 30 984.5 31 1728.0 32 3219.0 33 5594.0 34 8946.5 35 13767.5 36 20066.0 37 26133.5 38 29387.5 39 30181.5 40 29890.5 41 28695.0 42 27649.5 43 27192.0 44 27289.5 45 28408.5 46 30217.0 47 32173.0 48 34225.0 49 39083.0 50 45581.0 51 46323.5 52 44704.0 53 47263.0 54 52383.5 55 53068.5 56 44597.5 57 37848.5 58 36625.0 59 35689.5 60 29998.0 61 22015.5 62 17890.0 63 12448.0 64 6999.5 65 4442.0 66 3380.5 67 2894.0 68 2112.0 69 1222.5 70 694.0 71 507.5 72 458.5 73 427.0 74 315.5 75 207.0 76 121.0 77 65.0 78 39.0 79 16.5 80 8.0 81 7.0 82 7.5 83 4.5 84 1.5 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4662233504368715 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 8.014152994187736E-4 22-23 0.0011019460367008137 24-25 4.007076497093868E-4 26-27 0.0018031844236922406 28-29 0.003606368847384481 30-31 7.513268432051002E-4 32-33 5.008845621367335E-5 34-35 0.0034060150225297876 36-37 0.0017030075112648938 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008715391381179162 46-47 0.08009144148566368 48-49 6.010614745640802E-4 50-51 0.0 52-53 5.008845621367335E-5 54-55 0.0 56-57 0.007713622256905695 58-59 0.03901890739045154 60-61 0.030002985271990336 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 3.005307372820401E-4 78-79 0.007262826150982635 80-81 0.005259287902435701 82-83 9.516806680597936E-4 84-85 0.0020536267047606073 86-87 0.0 88-89 0.0 90-91 0.0 92-93 1.001769124273467E-4 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06987339641807432 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 998234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.70027704531871 #Duplication Level Percentage of deduplicated Percentage of total 1 68.07897441798025 26.346751709370004 2 16.11222588830431 12.470952113882658 3 6.369391574775168 7.394916556617534 4 3.059721826058395 4.736483294002734 5 1.7901129614697004 3.4638933775646668 6 1.0921700687243503 2.5360370544142277 7 0.678010933901633 1.8367447687223926 8 0.4868832995477207 1.5074014864988547 9 0.35352456100387397 1.2313348607857137 >10 1.6485001736245821 11.413144982293188 >50 0.14682522952070415 4.02128443174189 >100 0.15590268096519805 13.187614507045476 >500 0.02023362581015856 5.274423380190818 >1k 0.007522758314033311 4.579017476869822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3345 0.3350917720694747 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 2513 0.25174458092992225 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2449 0.24533325853457205 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 2395 0.23992370526349535 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 2213 0.22169150720171824 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1834 0.18372445739175383 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1731 0.17340623541173714 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1673 0.16759597449095104 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1655 0.16579279006725878 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1620 0.16228659813230165 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1615 0.1617857135701649 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1615 0.1617857135701649 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1535 0.15377156057597718 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1522 0.15246926071442166 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1482 0.1484621842173278 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1429 0.14315280785867843 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 1400 0.14024767739828536 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1318 0.13203317057924294 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1316 0.13183281675438827 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1296 0.1298292785058413 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1157 0.11590468767844013 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 1147 0.11490291855416666 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 1093 0.10949336528308994 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 1077 0.10789053468425239 No Hit GGATGGCACTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCT 1060 0.1061875271729875 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 1059 0.10608735026056014 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1035 0.10368310436230384 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 1016 0.10177974302618424 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1012 0.10137903537647484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 1.0017691242734669E-4 0.0 22-23 0.0 0.0 0.0 3.005307372820401E-4 0.0 24-25 0.0 0.0 0.0 7.513268432051002E-4 0.0 26-27 0.0 0.0 0.0 0.0016028305988375472 0.0 28-29 0.0 0.0 0.0 0.003606368847384481 0.0 30-31 0.0 0.0 0.0 0.009416629768170589 0.0 32-33 0.0 0.0 0.0 0.020335913222751377 0.0 34-35 0.0 0.0 0.0 0.03380970794422951 0.0 36-37 0.0 0.0 0.0 0.06075729738718577 0.0 38-39 0.0 0.0 0.0 0.10668841173512422 0.0 40-41 0.0 0.0 0.0 0.16639385154182285 0.0 42-43 0.0 0.0 0.0 0.21888655365375254 0.0 44-45 0.0 0.0 0.0 0.2776403127923913 0.0 46-47 0.0 0.0 0.0 0.34981777819629467 0.0 48-49 0.0 0.0 0.0 0.4295586004884626 0.0 50-51 0.0 0.0 0.0 0.52197180220269 0.0 52-53 0.0 0.0 0.0 0.6099271313139003 0.0 54-55 0.0 0.0 0.0 0.6958288337203501 0.0 56-57 0.0 0.0 0.0 0.7928000849500217 0.0 58-59 0.0 0.0 0.0 0.9071019420296244 0.0 60-61 0.0 0.0 0.0 1.0380331665721665 0.0 62-63 0.0 0.0 0.0 1.1786314631639474 0.0 64-65 0.0 0.0 0.0 1.310263926093481 0.0 66-67 0.0 0.0 0.0 1.4618816830522703 0.0 68-69 0.0 0.0 0.0 1.6354381838326484 0.0 70-71 0.0 0.0 0.0 1.8315845783653932 0.0 72-73 0.0 0.0 0.0 2.043859455798941 0.0 74-75 0.0 0.0 0.0 2.2483205340631556 0.0 76-77 0.0 0.0 0.0 2.4656042571180707 0.0 78-79 0.0 0.0 0.0 2.7145939729562407 0.0 80-81 0.0 0.0 0.0 2.990881897430863 0.0 82-83 0.0 0.0 0.0 3.290511042501057 0.0 84-85 0.0 0.0 0.0 3.591943371994943 0.0 86-87 0.0 0.0 0.0 3.9084022383529313 0.0 88-89 0.0 0.0 0.0 4.264080365926226 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 770 0.0 57.652454 1 GCGTAAT 50 2.7458813E-5 47.733753 1 AAACCGT 190 0.0 47.49226 6 GTATCAA 1605 0.0 46.990234 1 ACCGTGC 280 0.0 37.315346 8 CCGTGCG 230 0.0 37.16786 9 AACCGTG 300 0.0 34.82766 7 ATCAACG 2160 0.0 34.739708 3 GTCGCTA 55 0.0025815256 34.53983 9 TCGCACC 1130 0.0 32.10412 1 TCAACGC 2365 0.0 31.728447 4 ATCACGC 120 1.507633E-7 31.661505 3 GTATCAC 245 0.0 31.173063 1 GTACATG 5305 0.0 31.132664 1 CGCACCA 1165 0.0 30.982075 2 ACATGGG 5435 0.0 29.44782 3 TACATGG 5580 0.0 29.278385 2 CGCAGAG 2770 0.0 27.603804 8 GCTATAG 540 0.0 27.402708 1 CATGGGG 4090 0.0 27.171614 4 >>END_MODULE