##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224556_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1029075 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33569856424459 34.0 31.0 34.0 31.0 34.0 2 32.49454995991546 34.0 31.0 34.0 31.0 34.0 3 32.63197337414668 34.0 31.0 34.0 31.0 34.0 4 35.903781551393244 37.0 37.0 37.0 35.0 37.0 5 35.9260432913053 37.0 37.0 37.0 35.0 37.0 6 36.02143186842553 37.0 37.0 37.0 35.0 37.0 7 35.98504190656658 37.0 37.0 37.0 35.0 37.0 8 36.0242373004883 37.0 37.0 37.0 35.0 37.0 9 37.77427981439642 39.0 39.0 39.0 35.0 39.0 10-11 37.84710055146612 39.0 39.0 39.0 37.0 39.0 12-13 37.83895440079683 39.0 39.0 39.0 37.0 39.0 14-15 39.342699511697404 41.0 40.0 41.0 37.0 41.0 16-17 39.18854505259578 41.0 40.0 41.0 36.5 41.0 18-19 39.27426620994582 41.0 40.0 41.0 36.5 41.0 20-21 39.33196025556932 41.0 40.0 41.0 37.0 41.0 22-23 39.29292811505478 41.0 40.0 41.0 37.0 41.0 24-25 39.228709763622675 41.0 40.0 41.0 36.0 41.0 26-27 39.06388212715302 41.0 39.5 41.0 35.5 41.0 28-29 39.00337050263586 41.0 39.0 41.0 35.0 41.0 30-31 38.93028933751184 41.0 39.0 41.0 35.0 41.0 32-33 38.750283021159774 41.0 39.0 41.0 35.0 41.0 34-35 38.75356752423293 41.0 39.0 41.0 35.0 41.0 36-37 38.73013337220319 41.0 39.0 41.0 35.0 41.0 38-39 38.60779243495372 41.0 39.0 41.0 35.0 41.0 40-41 38.51638218788718 40.5 39.0 41.0 35.0 41.0 42-43 38.37235672812963 40.0 38.0 41.0 34.5 41.0 44-45 38.184951534144744 40.0 38.0 41.0 34.0 41.0 46-47 38.01843791754732 40.0 38.0 41.0 33.5 41.0 48-49 37.79588951242621 40.0 37.0 41.0 33.0 41.0 50-51 36.481087870174676 38.5 35.5 40.0 31.5 40.5 52-53 36.76195758326652 39.0 35.5 40.0 31.5 40.5 54-55 37.182563467191414 39.0 35.5 41.0 33.0 41.0 56-57 37.01173918324709 39.0 35.0 41.0 32.5 41.0 58-59 36.85551976289386 39.0 35.0 41.0 32.5 41.0 60-61 36.611711974345894 38.5 35.0 41.0 32.0 41.0 62-63 36.35082428394432 38.0 35.0 41.0 31.5 41.0 64-65 36.121356558074 37.0 35.0 41.0 31.0 41.0 66-67 35.919056434176326 37.0 35.0 40.5 31.0 41.0 68-69 35.654794354153 36.0 35.0 40.0 31.0 41.0 70-71 35.40841921142774 36.0 35.0 39.5 30.5 41.0 72-73 35.11762505162403 35.0 35.0 39.0 30.0 41.0 74-75 34.86139348443991 35.0 35.0 39.0 30.0 41.0 76-77 34.5557981682579 35.0 34.5 38.0 29.5 40.0 78-79 34.318198867915356 35.0 34.0 37.0 30.0 39.0 80-81 34.007594198673566 35.0 34.0 37.0 29.0 39.0 82-83 33.72037169302529 35.0 34.0 36.0 29.0 38.5 84-85 33.46699220173457 35.0 34.0 36.0 29.0 37.0 86-87 33.22651944707626 35.0 34.0 36.0 29.0 37.0 88-89 33.06495153414474 35.0 34.0 35.0 28.5 36.5 90-91 32.87316813643321 35.0 34.0 35.0 27.5 36.0 92-93 32.718132303282076 35.0 34.0 35.0 27.0 36.0 94-95 32.581030051259624 35.0 33.0 35.0 27.0 36.0 96-97 32.43504409299614 35.0 33.0 35.0 26.5 35.5 98-99 32.390892792070545 35.0 33.0 35.0 26.0 35.0 100-101 31.177633311469037 34.5 31.0 35.0 22.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 7.0 7 294.0 8 1227.0 9 946.0 10 746.0 11 983.0 12 1525.0 13 1710.0 14 1739.0 15 1683.0 16 1847.0 17 2023.0 18 2359.0 19 2529.0 20 3095.0 21 4189.0 22 5242.0 23 5353.0 24 5254.0 25 5454.0 26 5639.0 27 5659.0 28 6013.0 29 6849.0 30 8506.0 31 10997.0 32 14732.0 33 21252.0 34 36917.0 35 67734.0 36 147960.0 37 247834.0 38 283428.0 39 117326.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.66214949769406 20.619116529335 14.274481028376904 23.444252944594044 2 15.51443336436447 21.282045800399192 38.437566200292686 24.76595463494365 3 19.055906680970818 28.434939440583364 28.93811123031236 23.571042648133464 4 12.912469936593544 18.14435293831839 40.11806719626849 28.825109928819572 5 13.601341010130458 39.54055826834779 33.82037266477176 13.037728056749994 6 26.968296771372348 38.662779680781284 20.66273109345772 13.706192454388649 7 25.594441610183903 31.92080266258533 23.98377183392853 18.500983893302237 8 25.48988168986711 34.142506620022836 21.925709982265627 18.441901707844423 9 27.1433083108617 15.801083497315553 21.019847921677233 36.035760270145516 10-11 25.669314675801086 25.57179991740155 28.05198843621699 20.706896970580377 12-13 26.088866214804558 23.40320190462308 28.076767971236304 22.431163909336053 14-15 23.530709780460075 25.068786972542078 25.47249274462086 25.928010502376985 16-17 22.98950054408128 27.932617551216087 26.426499432580115 22.65138247212252 18-19 23.018503155786046 27.34475121850228 27.016075142067475 22.620670483644197 20-21 24.539872827683553 25.574496710842894 26.388790327049243 23.496840134424307 22-23 24.750755779072335 26.403405648919836 25.907591240450056 22.938247331557776 24-25 23.59166821767056 26.56055694241491 26.16605930488136 23.681715535033167 26-27 23.283677088647572 27.438719238150767 26.765930568714623 22.51167310448704 28-29 23.00507737531278 27.18684255277798 27.090688239438332 22.71739183247091 30-31 23.207103466705536 26.475864247017956 26.94332288705877 23.37370939921774 32-33 23.18198382042125 26.482277773728836 27.37380657386488 22.961931831985037 34-35 23.744673614653937 26.166460170541505 26.840755047008237 23.248111167796324 36-37 22.82728339655009 26.315196077240266 27.65278327870207 23.204737247507577 38-39 23.008930827389165 26.626693358729664 26.66114361236905 23.70323220151212 40-41 23.633476527063713 26.259650514005727 27.18154214837242 22.925330810558144 42-43 23.387218246043663 26.63547269555753 27.155275036563026 22.82203402183578 44-45 23.462206042135175 26.133799299107658 26.699071113555835 23.704923545201336 46-47 23.53215266137065 26.04732405315453 26.48810825255691 23.932415032917913 48-49 22.834438694944488 26.311250394772006 26.929524087165657 23.92478682311785 50-51 22.95396351092 26.746787163229115 26.587712265869833 23.71153705998105 52-53 23.34159317833977 26.578043388479944 26.01005757597843 24.070305857201856 54-55 23.256613949420597 25.96482277773729 26.66909603284503 24.109467239997084 56-57 23.19419050807303 26.564306082795753 26.495263462460688 23.746239946670528 58-59 23.72232907613106 26.463301918608096 26.545815381714664 23.268553623546172 60-61 23.357271566277706 26.63364104119164 26.568765805745564 23.440321586785085 62-63 22.804543179156198 26.287695799454703 27.2394889166452 23.6682721047439 64-65 23.98671787540449 25.83019354939065 26.23418907535044 23.948899499854413 66-67 23.216713755745207 26.23124090655952 26.136528198534165 24.415517139161107 68-69 23.077812598693 26.26110827685057 27.447076257804337 23.214002866652088 70-71 23.8314505745451 25.94917765954862 26.78279036999247 23.436581395913805 72-73 23.30019677866045 26.20392099701188 27.137234895415784 23.358647328911886 74-75 23.431819838204213 25.805845055025145 27.02140271603139 23.740932390739257 76-77 23.199280907611204 25.66848869130044 26.26737604159075 24.864854359497606 78-79 23.366515617217207 25.2501548965534 27.00764156330106 24.375687922928336 80-81 23.088063284456283 26.36171741537911 26.529826475280966 24.02039282488364 82-83 22.87725691085524 26.87346326865734 26.676975547438513 23.572304273048907 84-85 23.092512841648105 25.731654389197317 27.328786530473188 23.84704623868139 86-87 23.070292753999425 26.757197312763402 26.62024917075153 23.55226076248564 88-89 23.304085708356155 26.011414884842644 26.34264387318717 24.34185553361403 90-91 23.09996841823968 25.87255545028302 26.558025411170227 24.469450720307073 92-93 23.179209849909384 25.839297601173904 26.97510798847475 24.006384560441962 94-95 23.475111143502662 25.448582464834924 26.935840439229402 24.14046595243301 96-97 23.54162718946627 26.32237689186891 26.724048295799623 23.411947622865195 98-99 22.520377662117568 26.55597103398415 26.943992039398758 23.979659264499528 100-101 23.43042967867064 25.77999110456511 26.376131069129194 24.41344814763505 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 2.0 2 3.5 3 4.0 4 2.5 5 2.0 6 3.0 7 7.0 8 14.5 9 20.5 10 22.5 11 30.5 12 34.0 13 39.0 14 41.0 15 43.0 16 46.0 17 55.5 18 68.5 19 70.0 20 89.5 21 105.0 22 113.5 23 148.0 24 199.5 25 246.5 26 312.0 27 443.5 28 588.0 29 779.0 30 1230.5 31 2415.0 32 4808.0 33 8846.5 34 15185.5 35 24472.0 36 37165.0 37 48518.0 38 53223.5 39 53059.5 40 49183.5 41 42300.5 42 35833.5 43 30560.5 44 26779.0 45 26146.0 46 27670.5 47 27345.0 48 28429.0 49 33467.0 50 38590.5 51 39095.5 52 38005.5 53 39502.5 54 42438.5 55 43416.5 56 36304.0 57 29828.5 58 28493.5 59 27509.5 60 23122.0 61 17328.5 62 13854.5 63 9749.0 64 5917.5 65 3866.0 66 3070.0 67 2705.0 68 2149.0 69 1367.0 70 773.5 71 458.0 72 337.0 73 262.5 74 211.5 75 166.5 76 108.0 77 71.0 78 45.5 79 28.5 80 19.0 81 13.5 82 12.5 83 9.5 84 7.5 85 6.5 86 8.0 87 7.5 88 5.0 89 3.0 90 3.0 91 4.5 92 3.0 93 3.5 94 5.0 95 2.5 96 3.0 97 4.5 98 3.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14712241576172777 2 9.71746471345626E-5 3 2.9152394140368777E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.034545587056337 16-17 0.07152054029103806 18-19 0.02434224910720793 20-21 0.03809246167674854 22-23 0.06471831499161869 24-25 0.016665451983577485 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.020163739280421738 38-39 0.005344605592400942 40-41 0.004810145033160848 42-43 0.0029152394140368777 44-45 0.009814639360590823 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 4.85873235672813E-5 58-59 0.014770546364453513 60-61 0.017199912542817577 62-63 0.027208901197677524 64-65 0.04610937006534995 66-67 0.01690838860141389 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01579088015936642 80-81 0.05597259674950805 82-83 0.04975341933289605 84-85 0.028520758933994122 86-87 0.05670140660301728 88-89 0.03211622087797293 90-91 0.0 92-93 0.0029152394140368777 94-95 0.0 96-97 0.0 98-99 6.802225299419382E-4 100-101 0.04445740106406238 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1029075.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.406433325216184 #Duplication Level Percentage of deduplicated Percentage of total 1 67.97106658030808 24.745841034998158 2 15.092141804258679 10.989021086629029 3 6.245612213282467 6.8214139385407195 4 3.1293184082408754 4.557092879319723 5 1.8231869450424856 3.318786697704691 6 1.1926884842782723 2.605292026837804 7 0.8214705796222571 2.093476971995108 8 0.5885541412786535 1.714172568219293 9 0.43284462827079806 1.4182496189386913 >10 2.309667187657416 15.218496976708037 >50 0.19199327116592618 4.942263202764755 >100 0.17495553626797852 13.273875520127529 >500 0.01973996003887548 4.776441171108621 >1k 0.006760260287286123 3.5255763061078755 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2665 0.2589704346136093 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2174 0.2112576828705391 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 2060 0.20017977309719895 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1895 0.1841459563199961 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1890 0.1836600830843233 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1578 0.15334159317833976 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1560 0.15159244952991766 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1532 0.1488715594101499 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1491 0.14488739887763283 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1475 0.14333260452347982 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1361 0.1322546947501397 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1317 0.12797901027621894 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 1242 0.12069091174112676 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1232 0.11971916526978112 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1214 0.11797002162135899 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 1171 0.11379151179457281 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 1153 0.11204236814615068 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1144 0.11116779632193961 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1133 0.11009887520345941 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1122 0.10902995408497923 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1107 0.1075723343779608 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1090 0.10592036537667322 No Hit ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 1089 0.10582319072953866 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1074 0.10436557102252023 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1043 0.10135315696134879 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.717464713456259E-5 0.0 10-11 0.0 0.0 0.0 9.717464713456259E-5 0.0 12-13 0.0 0.0 0.0 1.9434929426912517E-4 0.0 14-15 0.0 0.0 0.0 1.9434929426912517E-4 0.0 16-17 0.0 0.0 0.0 2.4293661783640646E-4 0.0 18-19 0.0 0.0 0.0 4.3728591210553166E-4 0.0 20-21 0.0 0.0 0.0 6.316352063746568E-4 0.0 22-23 0.0 0.0 0.0 0.0012632704127493138 0.0 24-25 0.0 0.0 0.0 0.00223501688409494 0.0 26-27 0.0 0.0 0.0 0.003546874620411535 0.0 28-29 0.0 0.0 0.0 0.0054417802395355045 0.0 30-31 0.0 0.0 0.0 0.01423608580521342 0.0 32-33 0.0 0.0 0.0 0.03386536452639506 0.0 34-35 0.0 0.0 0.0 0.058401962927872114 0.0 36-37 0.0 0.0 0.0 0.10203337949129072 0.0 38-39 0.0 0.0 0.0 0.1816194154944975 0.0 40-41 0.0 0.0 0.0 0.2784539513640891 0.0 42-43 0.0 0.0 0.0 0.3763574083521609 0.0 44-45 0.0 0.0 0.0 0.4854359497607075 0.0 46-47 0.0 0.0 0.0 0.6095765614751112 0.0 48-49 0.0 0.0 0.0 0.751014260379467 0.0 50-51 0.0 0.0 0.0 0.9020722493501445 0.0 52-53 0.0 0.0 0.0 1.0448703933143844 0.0 54-55 0.0 0.0 0.0 1.1790685810072152 0.0 56-57 0.0 0.0 0.0 1.3360056361295338 0.0 58-59 0.0 0.0 0.0 1.5207346403323374 0.0 60-61 0.0 0.0 0.0 1.7192624444282487 0.0 62-63 0.0 0.0 0.0 1.92172582173311 0.0 64-65 0.0 0.0 0.0 2.11651240191434 0.0 66-67 0.0 0.0 0.0 2.3382649466754124 0.0 68-69 0.0 0.0 0.0 2.5941257925807157 0.0 70-71 0.0 0.0 0.0 2.8753492213881398 0.0 72-73 0.0 0.0 0.0 3.178145421859437 0.0 74-75 0.0 0.0 0.0 3.463887471758618 0.0 76-77 0.0 0.0 0.0 3.7632825595802055 0.0 78-79 0.0 0.0 0.0 4.101887617520589 0.0 80-81 0.0 0.0 0.0 4.497048320093287 0.0 82-83 0.0 0.0 0.0 4.909117411267401 0.0 84-85 0.0 0.0 0.0 5.305395622282147 0.0 86-87 0.0 0.0 0.0 5.729320020406676 0.0 88-89 0.0 0.0 0.0 6.18370867040789 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 930 0.0 57.2734 1 GTATCAA 2075 0.0 48.35955 1 ATCAACG 2725 0.0 35.72148 3 CCGTGCG 190 0.0 35.008205 9 TCAACGC 2835 0.0 34.33546 4 GCGTAAT 60 0.0039274814 31.704918 1 CAGTGCG 90 2.4088564E-5 31.67409 9 AATGCGG 420 0.0 30.52506 7 TATCAAC 3295 0.0 30.118473 2 AACCGTG 240 0.0 29.677145 7 CGCAGAG 3355 0.0 29.298206 8 GCCCATA 1160 0.0 29.108395 1 AAACCGT 245 0.0 29.071487 6 ATGCGGG 430 0.0 28.712307 8 CCCATAA 1195 0.0 28.609264 2 ACGCAGA 3460 0.0 28.407717 7 ACCGTGC 245 0.0 27.134708 8 GTACATG 5810 0.0 26.930079 1 ACATGGG 5760 0.0 26.297249 3 AAATGCG 490 0.0 26.16434 6 >>END_MODULE