##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224555_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 874015 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.078773247598726 34.0 31.0 34.0 30.0 34.0 2 32.243186901826626 34.0 31.0 34.0 30.0 34.0 3 32.37587341178355 34.0 31.0 34.0 31.0 34.0 4 35.68957283341819 37.0 35.0 37.0 35.0 37.0 5 35.69746056989869 37.0 37.0 37.0 35.0 37.0 6 35.795772383769155 37.0 37.0 37.0 35.0 37.0 7 35.753110644554155 37.0 37.0 37.0 35.0 37.0 8 35.788860603078895 37.0 37.0 37.0 35.0 37.0 9 37.507198389043666 39.0 38.0 39.0 35.0 39.0 10-11 37.57137291694079 39.0 38.5 39.0 35.0 39.0 12-13 37.568287729615626 39.0 38.0 39.0 35.0 39.0 14-15 39.031717419037435 41.0 39.0 41.0 36.0 41.0 16-17 38.864509762418265 41.0 39.5 41.0 35.5 41.0 18-19 38.94575264726578 41.0 39.5 41.0 35.5 41.0 20-21 39.01707236145833 41.0 40.0 41.0 36.0 41.0 22-23 38.96379867622409 41.0 39.0 41.0 35.5 41.0 24-25 38.892570493641415 41.0 39.0 41.0 35.0 41.0 26-27 38.711014685102654 41.0 39.0 41.0 35.0 41.0 28-29 38.62186289708987 41.0 39.0 41.0 35.0 41.0 30-31 38.53529172840283 40.5 39.0 41.0 34.5 41.0 32-33 38.329333592672896 40.0 38.0 41.0 34.0 41.0 34-35 38.31343684032883 40.0 38.0 41.0 34.0 41.0 36-37 38.30218245682282 40.0 38.0 41.0 34.0 41.0 38-39 38.18971070290556 40.0 38.0 41.0 34.0 41.0 40-41 38.08777938593731 40.0 38.0 41.0 33.0 41.0 42-43 37.925048769185885 40.0 38.0 41.0 33.0 41.0 44-45 37.73337700153887 40.0 37.5 41.0 33.0 41.0 46-47 37.53339587993341 40.0 37.0 41.0 32.0 41.0 48-49 37.3074277901409 40.0 36.5 41.0 31.5 41.0 50-51 36.016480838429544 38.5 35.0 40.0 29.5 40.5 52-53 36.36242970658398 39.0 35.0 40.0 30.5 40.5 54-55 36.82344524979548 39.0 35.0 41.0 31.0 41.0 56-57 36.66173749878435 39.0 35.0 41.0 31.0 41.0 58-59 36.51393168309468 39.0 35.0 41.0 31.0 41.0 60-61 36.26045891660898 38.5 35.0 41.0 30.0 41.0 62-63 35.97294897684822 38.0 35.0 41.0 30.0 41.0 64-65 35.70784025445788 37.0 35.0 40.0 29.0 41.0 66-67 35.450278313301254 36.5 35.0 40.0 29.0 41.0 68-69 35.12661853629514 36.0 35.0 39.5 29.0 41.0 70-71 34.82200591523029 35.5 34.5 39.0 29.0 41.0 72-73 34.49420032836965 35.0 34.0 39.0 28.0 41.0 74-75 34.21007419781125 35.0 34.0 37.5 28.0 40.0 76-77 33.861234647002625 35.0 34.0 37.0 27.0 39.0 78-79 33.625480683969954 35.0 34.0 37.0 27.0 39.0 80-81 33.32884332648753 35.0 34.0 36.0 27.0 38.5 82-83 33.07338775650304 35.0 34.0 36.0 27.0 37.0 84-85 32.855769065748305 35.0 33.0 35.5 26.0 37.0 86-87 32.63552570608056 35.0 33.0 35.0 26.0 36.5 88-89 32.47921603176147 35.0 33.0 35.0 26.0 36.0 90-91 32.312158830226025 35.0 33.0 35.0 25.0 36.0 92-93 32.17576757835964 35.0 33.0 35.0 25.0 36.0 94-95 32.04413883056927 35.0 33.0 35.0 25.0 35.0 96-97 31.913663953135817 35.0 33.0 35.0 24.0 35.0 98-99 31.864383906454695 35.0 33.0 35.0 24.0 35.0 100-101 30.670938713866466 34.0 30.5 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 4.0 7 93.0 8 376.0 9 331.0 10 502.0 11 995.0 12 1795.0 13 2139.0 14 2137.0 15 2108.0 16 2320.0 17 2469.0 18 2884.0 19 3256.0 20 3991.0 21 5013.0 22 5968.0 23 5527.0 24 5357.0 25 5487.0 26 5716.0 27 6050.0 28 6809.0 29 7844.0 30 9455.0 31 11755.0 32 15343.0 33 21143.0 34 33765.0 35 59385.0 36 124016.0 37 217171.0 38 240232.0 39 62557.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93412809997376 19.387218419885667 13.77721554378378 23.901437936356793 2 15.91860551592364 19.860071051412163 38.95917118127264 25.26215225139157 3 18.689903571118016 26.509590257342 29.00040274046581 25.800103431074174 4 12.426560184893852 17.276248119311454 39.286396686555726 31.010795009238972 5 13.545877359084226 38.85951614102733 34.29609331647626 13.298513183412183 6 29.45830449134168 37.886992786164996 19.217061492079658 13.437641230413666 7 26.427578474053647 31.6747424243291 23.196627060176315 18.701052041440935 8 25.90344559303902 34.328930281516904 20.877788138647507 18.889835986796566 9 26.51933891294772 15.3527113379061 20.56486444740651 37.563085301739676 10-11 25.68754540825958 25.27468064049244 27.970458172914654 21.067315778333324 12-13 26.20429855322849 22.98118453344622 28.097515488864605 22.71700142446068 14-15 23.516168445992154 24.73192799526149 25.25825733882344 26.493646219922912 16-17 23.41730193660964 27.14533846587175 26.296568969820765 23.140790627697847 18-19 23.181076373391196 26.738755255863566 27.165862121846768 22.914306248898473 20-21 24.70584936122139 25.0494614892873 26.815538547912542 23.429150601578762 22-23 24.49433931373374 25.991242637558653 26.05776149725824 23.456656551449363 24-25 23.578161020163996 25.87658542362931 26.658232816602666 23.88702073960402 26-27 23.498452543720646 26.696910236094347 26.786554006510187 23.01808321367482 28-29 23.311442023306235 26.846736039999314 26.680606168086364 23.16121576860809 30-31 23.516072378620503 25.84835500534888 26.912066726543593 23.723505889487022 32-33 23.554973312814997 25.907907759020155 27.08557633450227 23.45154259366258 34-35 23.95559572776211 25.81317254280533 26.68106382613571 23.550167903296853 36-37 23.447046988852176 25.836086623644 27.22890628665729 23.487960100846532 38-39 23.364043804757376 26.09749316051256 26.626974183294834 23.911488851435234 40-41 24.050194775363277 25.625217759943155 26.986156617814068 23.338430846879504 42-43 23.8683132280605 25.96909779709674 26.80801571655284 23.35457325828992 44-45 23.938226589091357 25.78316713458637 26.410410302739372 23.868195973582896 46-47 23.885802875236696 25.624216975681197 26.19382962534968 24.29615052373243 48-49 23.416588960143706 26.017516861838757 26.51247404220751 24.05342013581003 50-51 23.577112520952156 26.244229218034015 26.178498080696556 24.00016018031727 52-53 24.020068305463866 26.13376200637289 25.723757601414164 24.122412086749083 54-55 23.820872639485593 25.585201626974364 26.213966579520946 24.379959154019097 56-57 23.79003792841084 26.19834899858698 25.95933708231552 24.05227599068666 58-59 24.23641475686915 26.077990916279404 26.162385523721465 23.52320880312998 60-61 23.97686114973308 26.29560968352873 25.978222931722083 23.749306235016107 62-63 23.835675544522612 25.885868563783337 26.43866016135106 23.839795730342995 64-65 24.484022143262695 25.498177622300776 25.81800948735325 24.19979074708328 66-67 23.63496128661636 25.884640296249508 25.798012949472337 24.682385467661796 68-69 23.807028483492847 26.114197124763304 26.425118562038406 23.65365582970544 70-71 24.209138287100334 25.56855431542937 26.233703082899034 23.988604314571262 72-73 24.071440421503063 25.664204847742887 26.50068934743683 23.76366538331722 74-75 24.01560613948273 25.628049861844477 26.27918285155289 24.077161147119902 76-77 23.857370868921013 25.460089357734134 25.782109002705905 24.90043077063895 78-79 23.95141536396422 25.081291951252865 26.323200662809054 24.644092021973858 80-81 23.767955832729918 25.942547059379105 25.999387519712418 24.290109588178556 82-83 23.702554739303263 26.154211585186115 26.229763414026884 23.913470261483734 84-85 23.717981731804766 25.484830485294 26.65082705871985 24.14636072418138 86-87 23.753822975690365 26.313635408754305 26.0264578824421 23.906083733113224 88-89 24.03395112772704 25.71937557118847 25.802010125594222 24.44466317549027 90-91 23.678083328089336 25.632626442337948 26.118716498000605 24.57057373157211 92-93 23.650392369209786 25.667130633174118 26.509364285791925 24.173112711824167 94-95 23.962117354965304 25.632740856850283 26.251265710542725 24.15387607764169 96-97 23.88843440902044 26.19611791559641 26.17620979044982 23.739237884933324 98-99 23.107991373047064 26.45070680373682 26.263236480340503 24.178065342875612 100-101 23.90443103902199 25.718627305090376 26.00262130699053 24.374320348897104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 2.0 2 3.5 3 4.0 4 3.0 5 3.5 6 9.0 7 14.0 8 23.0 9 36.5 10 40.5 11 46.0 12 61.0 13 71.5 14 79.5 15 96.5 16 107.5 17 118.0 18 130.0 19 147.0 20 198.0 21 249.0 22 316.0 23 428.5 24 559.0 25 813.5 26 1196.0 27 1750.0 28 2585.5 29 3661.5 30 5076.5 31 6803.0 32 8916.5 33 11098.0 34 13396.0 35 15656.0 36 18177.0 37 20743.5 38 22384.0 39 23514.5 40 24313.0 41 25084.5 42 25927.5 43 26701.5 44 28159.5 45 30934.0 46 33649.0 47 34395.5 48 35531.0 49 38139.0 50 40611.0 51 39581.5 52 37479.5 53 38436.5 54 38934.0 55 37412.0 56 31859.0 57 26699.0 58 24696.5 59 22771.5 60 19157.5 61 14668.5 62 11603.0 63 8422.0 64 5368.5 65 3588.5 66 2827.5 67 2383.0 68 1868.0 69 1245.5 70 796.5 71 558.0 72 419.5 73 329.5 74 265.5 75 205.0 76 136.0 77 81.5 78 53.5 79 37.0 80 26.0 81 27.5 82 21.5 83 13.0 84 11.5 85 8.0 86 7.0 87 7.5 88 5.5 89 5.5 90 5.5 91 3.5 92 2.0 93 2.5 94 3.5 95 4.0 96 5.5 97 5.5 98 2.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1494253531117887 2 0.0 3 3.4324353701023437E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0368986802286002 16-17 0.07242438630915946 18-19 0.026200923325114558 20-21 0.040674359135712775 22-23 0.06618879538680686 24-25 0.017791456668363816 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.024255876615389894 38-39 0.005263067567490261 40-41 0.006807663484036316 42-43 0.003661264394775833 44-45 0.012757218125547044 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.016475689776491248 60-61 0.018306321973879165 62-63 0.030663089306247605 64-65 0.049312654817137 66-67 0.01796307843686893 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01813470020537405 80-81 0.059209510134265425 82-83 0.05062842170900957 84-85 0.029290115158206665 86-87 0.058751852084918454 88-89 0.03300858680915087 90-91 0.0 92-93 0.0033752281139339713 94-95 0.0 96-97 0.0 98-99 0.0011441451233674478 100-101 0.04633787749638164 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 874015.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.228019836664494 #Duplication Level Percentage of deduplicated Percentage of total 1 78.29914762008325 45.59204320816128 2 13.553831430427534 15.784255307874822 3 4.0501596135878355 7.074983229649495 4 1.5869691604538887 3.6962428702033527 5 0.7949583364509556 2.314442489209402 6 0.4366447107563659 1.5254974127697782 7 0.25797276215072074 1.0514870178281908 8 0.16578055951534806 0.772245896639442 9 0.11779589476478786 0.6173119527337538 >10 0.5827929464129226 6.426656102281307 >50 0.07221394833315585 2.96360083813647 >100 0.07498805936599333 8.826609276243527 >500 0.005157908827383802 2.004619393532025 >1k 0.0015870488699642469 1.350005004737166 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 2071 0.23695245504939846 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1670 0.1910722356023638 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1643 0.1879830437692717 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1614 0.1846650229115061 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1305 0.14931093859945196 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1226 0.14027219212484912 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1080 0.12356767332368439 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1078 0.12333884429901087 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 898 0.10274423207839684 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 886 0.10137125793035588 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.144145123367448E-4 0.0 5 0.0 0.0 0.0 1.144145123367448E-4 0.0 6 0.0 0.0 0.0 1.144145123367448E-4 0.0 7 0.0 0.0 0.0 1.144145123367448E-4 0.0 8 0.0 0.0 0.0 1.144145123367448E-4 0.0 9 0.0 0.0 0.0 2.288290246734896E-4 0.0 10-11 0.0 0.0 0.0 2.288290246734896E-4 0.0 12-13 0.0 0.0 0.0 2.288290246734896E-4 0.0 14-15 0.0 0.0 0.0 2.288290246734896E-4 0.0 16-17 0.0 0.0 0.0 2.288290246734896E-4 0.0 18-19 0.0 0.0 0.0 3.4324353701023437E-4 0.0 20-21 0.0 0.0 0.0 4.576580493469792E-4 0.0 22-23 0.0 0.0 0.0 6.864870740204687E-4 5.72072561683724E-5 24-25 0.0 0.0 0.0 9.725233548623308E-4 1.144145123367448E-4 26-27 0.0 0.0 0.0 0.0010869378671990756 1.144145123367448E-4 28-29 0.0 0.0 0.0 0.0015445959165460547 1.144145123367448E-4 30-31 0.0 0.0 0.0 0.0029175700645869924 1.144145123367448E-4 32-33 0.0 0.0 0.0 0.006807663484036315 1.144145123367448E-4 34-35 0.0 0.0 0.0 0.011384243977506106 1.144145123367448E-4 36-37 0.0 0.0 0.0 0.020651819476782435 1.144145123367448E-4 38-39 0.0 0.0 0.0 0.0372991310217788 1.144145123367448E-4 40-41 0.0 0.0 0.0 0.05577707476416309 1.144145123367448E-4 42-43 0.0 0.0 0.0 0.07322528789551666 1.7162176850511718E-4 44-45 0.0 0.0 0.0 0.09256134048042654 2.288290246734896E-4 46-47 0.0 0.0 0.0 0.11870505654937272 2.288290246734896E-4 48-49 0.0 0.0 0.0 0.14633616127869659 3.4324353701023437E-4 50-51 0.0 0.0 0.0 0.17814339570831164 3.4324353701023437E-4 52-53 0.0 0.0 0.0 0.2094929720885797 4.004507931786068E-4 54-55 0.0 0.0 0.0 0.24124299926202641 4.576580493469792E-4 56-57 0.0 0.0 0.0 0.2764254618055754 4.576580493469792E-4 58-59 0.0 0.0 0.0 0.31824396606465566 4.576580493469792E-4 60-61 0.0 0.0 0.0 0.3669845483201089 4.576580493469792E-4 62-63 0.0 0.0 0.0 0.4161827886249092 4.576580493469792E-4 64-65 0.0 0.0 0.0 0.46377922575699504 4.576580493469792E-4 66-67 0.0 0.0 0.0 0.5242472955269646 5.148653055153515E-4 68-69 0.0 0.0 0.0 0.593124831953685 5.720725616837239E-4 70-71 0.0 0.0 0.0 0.6649771457011607 5.720725616837239E-4 72-73 0.0 0.0 0.0 0.7527330766634439 6.864870740204687E-4 74-75 0.0 0.0 0.0 0.8434637849464826 6.864870740204687E-4 76-77 0.0 0.0 0.0 0.93247827554447 6.864870740204687E-4 78-79 0.0 0.0 0.0 1.035050885854362 6.864870740204687E-4 80-81 0.0 0.0 0.0 1.1506667505706423 6.864870740204687E-4 82-83 0.0 0.0 0.0 1.2849321807978122 6.864870740204687E-4 84-85 0.0 0.0 0.0 1.4205705851730233 6.864870740204687E-4 86-87 0.0 0.0 0.0 1.5687945859052763 6.864870740204687E-4 88-89 0.0 0.0 0.0 1.7209658873131468 6.864870740204687E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACCGT 355 0.0 54.841515 6 CCGTGCG 365 0.0 53.366486 9 ACCGTGC 380 0.0 52.489124 8 GGTATCA 980 0.0 51.916847 1 AACCGTG 380 0.0 51.23352 7 GTATCAA 1655 0.0 37.925083 1 TGCGCGG 350 0.0 30.545116 12-13 ATCAACG 2105 0.0 29.776646 3 AATGCGG 260 0.0 29.22137 7 TCAACGC 2190 0.0 28.62093 4 ATGCGGG 300 0.0 26.91109 8 CGGCTTA 365 0.0 26.686296 16-17 AAATGCG 290 0.0 26.19847 6 GTACATG 3390 0.0 25.949121 1 GTCTAAT 740 0.0 25.70271 1 GTGCGCG 420 0.0 25.453535 10-11 TACATGG 3430 0.0 25.195978 2 CGCAGAG 2545 0.0 24.81804 8 ACGCAGA 2575 0.0 24.52609 7 ACATGGG 3440 0.0 24.156473 3 >>END_MODULE