##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224554_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1071976 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04988917662336 34.0 31.0 34.0 30.0 34.0 2 32.22092099076845 34.0 31.0 34.0 30.0 34.0 3 32.36377959954327 34.0 31.0 34.0 31.0 34.0 4 35.67408878556983 37.0 35.0 37.0 35.0 37.0 5 35.68779524914737 37.0 37.0 37.0 35.0 37.0 6 35.782927043142756 37.0 37.0 37.0 35.0 37.0 7 35.738776800973156 37.0 37.0 37.0 35.0 37.0 8 35.77314510772629 37.0 37.0 37.0 35.0 37.0 9 37.482799055202726 39.0 38.0 39.0 35.0 39.0 10-11 37.54628461831235 39.0 38.0 39.0 35.0 39.0 12-13 37.53798639148637 39.0 38.0 39.0 35.0 39.0 14-15 38.99102778420412 41.0 39.0 41.0 36.0 41.0 16-17 38.81843623364702 41.0 39.0 41.0 35.5 41.0 18-19 38.89821647126428 41.0 39.0 41.0 35.5 41.0 20-21 38.9633737135906 41.0 39.0 41.0 36.0 41.0 22-23 38.91059781189131 41.0 39.0 41.0 35.0 41.0 24-25 38.840564061135694 41.0 39.0 41.0 35.0 41.0 26-27 38.65314102181392 41.0 39.0 41.0 35.0 41.0 28-29 38.57356321410181 41.0 39.0 41.0 34.5 41.0 30-31 38.48895264446219 40.0 39.0 41.0 34.0 41.0 32-33 38.298518810122616 40.0 38.0 41.0 34.0 41.0 34-35 38.282158835645575 40.0 38.0 41.0 34.0 41.0 36-37 38.27223277386807 40.0 38.0 41.0 34.0 41.0 38-39 38.155204500847034 40.0 38.0 41.0 33.5 41.0 40-41 38.05165600722404 40.0 38.0 41.0 33.0 41.0 42-43 37.89866704105316 40.0 38.0 41.0 33.0 41.0 44-45 37.71178412576401 40.0 37.5 41.0 32.5 41.0 46-47 37.52074066956723 40.0 37.0 41.0 32.0 41.0 48-49 37.29778465189519 40.0 36.5 41.0 31.5 41.0 50-51 36.00536112748793 38.5 34.5 40.0 29.5 40.5 52-53 36.3532504459055 39.0 35.0 40.0 30.5 40.5 54-55 36.80649146995828 39.0 35.0 41.0 31.0 41.0 56-57 36.63750214557042 39.0 35.0 41.0 31.0 41.0 58-59 36.485850895915576 39.0 35.0 41.0 31.0 41.0 60-61 36.232399326104314 38.0 35.0 41.0 30.5 41.0 62-63 35.95443927849131 37.5 35.0 41.0 30.0 41.0 64-65 35.700116886945224 37.0 35.0 40.0 30.0 41.0 66-67 35.465911083830235 36.5 35.0 40.0 29.0 41.0 68-69 35.163385654156436 36.0 35.0 39.5 29.0 41.0 70-71 34.88311398762659 35.5 34.0 39.0 29.0 41.0 72-73 34.56352287737785 35.0 34.0 39.0 28.5 41.0 74-75 34.29784715329448 35.0 34.0 38.5 28.0 40.0 76-77 33.97121530705911 35.0 34.0 37.0 28.0 39.5 78-79 33.74520185153399 35.0 34.0 37.0 28.0 39.0 80-81 33.442748251826536 35.0 34.0 36.0 27.0 39.0 82-83 33.17847507780024 35.0 34.0 36.0 27.0 37.5 84-85 32.94856881124204 35.0 33.0 35.5 26.5 37.0 86-87 32.71809443495003 35.0 33.0 35.0 26.0 37.0 88-89 32.560627756591565 35.0 33.0 35.0 26.0 36.0 90-91 32.38813835384374 35.0 33.0 35.0 25.5 36.0 92-93 32.24495044665179 35.0 33.0 35.0 25.0 36.0 94-95 32.10103864265618 35.0 33.0 35.0 25.0 35.5 96-97 31.961348015254075 35.0 33.0 35.0 25.0 35.0 98-99 31.917280797331284 35.0 33.0 35.0 25.0 35.0 100-101 30.70714176436786 34.0 30.5 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 9.0 7 110.0 8 411.0 9 431.0 10 583.0 11 1324.0 12 2357.0 13 2596.0 14 2751.0 15 2829.0 16 2934.0 17 3134.0 18 3429.0 19 3875.0 20 4625.0 21 5772.0 22 6589.0 23 6523.0 24 6409.0 25 6659.0 26 6851.0 27 7354.0 28 7997.0 29 9339.0 30 11390.0 31 14468.0 32 18726.0 33 26562.0 34 44094.0 35 76791.0 36 158198.0 37 257429.0 38 282315.0 39 87095.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.06144842174501 20.029786152615724 13.902228916112927 24.006536509526335 2 15.57991969969477 20.520981813025667 38.968036597834285 24.931061889445285 3 18.364420812052522 27.557545651717625 29.29508617271858 24.782947363511276 4 12.472480727180459 17.733792547594348 40.13578662208855 29.65794010313664 5 13.24180765241013 39.549672753867625 34.481928699896265 12.726590893825982 6 28.38188541534512 38.65991402792599 19.917423524407262 13.040777032321618 7 25.611487570617253 32.01965342507668 23.971898624596072 18.39696037970999 8 25.592550579490585 34.428662581998104 21.42799838802361 18.550788450487698 9 26.744628611088306 15.127577483077978 21.069221698993264 37.05857220684045 10-11 25.63028463323806 25.241936386635523 28.30576430815615 20.82201467197027 12-13 26.006599028336456 23.128969305282954 28.403807547930178 22.46062411845041 14-15 23.45474685788729 24.77584334043816 25.453352644525985 26.316057157148563 16-17 23.171787660602384 27.129823906270055 26.58606887377032 23.112319559357243 18-19 23.107022504804263 26.91217588430393 27.11251095801128 22.86829065288053 20-21 24.63456698182144 25.235666150585562 26.520082834283837 23.60968403330916 22-23 24.6597305102047 26.21273441733532 25.795650207491928 23.331884864968053 24-25 23.679427573897474 26.025271765244838 26.34916947272271 23.946131188134977 26-27 23.47599199982089 26.811794293902103 26.660998007418073 23.05121569885893 28-29 23.29459801338836 26.995893564781305 26.630493593140148 23.079014828690195 30-31 23.536347828682732 26.066441786010135 26.837214639133713 23.55999574617342 32-33 23.474312857750547 26.114763763367836 26.974997574572562 23.43592580430905 34-35 24.005015037650097 25.868069807533008 26.529371926237154 23.597543228579745 36-37 23.26156854914709 25.956386891621303 27.364608273259794 23.41743628597181 38-39 23.294956820592525 26.253564854938276 26.449427804049357 24.002050520419843 40-41 24.03580139628804 25.767424330414723 26.85697120150087 23.33980307179637 42-43 23.868484746997606 26.2167581755076 26.757181978596677 23.157575098898114 44-45 23.852473201944843 25.84685772715547 26.33572777029079 23.964941300608896 46-47 23.774133002977678 25.748104435173925 26.170175451689214 24.307587110159183 48-49 23.287321731083534 26.113364478309215 26.5623950536206 24.03691873698665 50-51 23.36857355015411 26.552460129704397 26.134213825682668 23.944752494458832 52-53 23.890693448360782 26.263087979581634 25.58112308484518 24.265095487212403 54-55 23.714290245304 25.65160040896438 26.128896542459906 24.505212803271714 56-57 23.66280759215113 26.281430872254074 26.01542665853837 24.040334877056424 58-59 24.206796270042645 26.208086612487214 26.153785867531376 23.431331249938772 60-61 23.88628214589944 26.4668644038541 25.969706837047823 23.67714661319863 62-63 23.45609776239561 26.095228941655442 26.478512997831867 23.97016029811708 64-65 24.437732975194734 25.562220359768766 25.75588026124954 24.24416640378696 66-67 23.54792389948432 25.978057330100125 25.68233791413081 24.79168085628475 68-69 23.56372717299641 26.190511727874505 26.718088837809802 23.52767226131928 70-71 24.06084651148906 25.66092897602185 26.363743218131745 23.914481294357337 72-73 23.99274797196952 25.786491488615415 26.630773450151867 23.589987089263193 74-75 23.873528884975038 25.57823122905737 26.48869937386658 24.059540512101016 76-77 23.69749882460055 25.376361037933687 25.79768576908438 25.12845436838138 78-79 23.936629524838064 24.991311284600332 26.37338850570423 24.698670684857376 80-81 23.487289869932763 26.09302171458761 26.105156158627054 24.314532256852576 82-83 23.385864619548734 26.3810812702709 26.340294467648224 23.89275964253214 84-85 23.43993490436279 25.41193332922753 26.953149057438313 24.194982708971366 86-87 23.597485732634137 26.461599923832708 26.11221980984313 23.828694533690026 88-89 23.72325797437394 25.86122025430091 25.962190341679232 24.45333142964592 90-91 23.35635312730882 25.634902273931502 26.324376665149217 24.684367933610453 92-93 23.361259245473292 25.603215094825426 26.785227019894236 24.250298639807042 94-95 23.810141271819518 25.378459965521614 26.61668731389509 24.19471144876378 96-97 23.781829070800093 26.101283983969793 26.5233083576498 23.593578587580318 98-99 22.843369784998146 26.435689514840703 26.57855765216763 24.142383047993526 100-101 23.662642753713474 25.643567082404118 26.20069913329311 24.493091030589298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 2.5 2 1.0 3 0.0 4 0.5 5 3.0 6 7.0 7 15.5 8 22.0 9 27.0 10 31.0 11 33.0 12 42.0 13 51.5 14 57.0 15 59.5 16 62.5 17 70.0 18 93.0 19 114.5 20 137.0 21 175.0 22 227.0 23 279.0 24 372.0 25 569.0 26 832.5 27 1172.5 28 1877.0 29 3229.5 30 5379.0 31 8632.0 32 13027.5 33 17503.5 34 21502.0 35 24795.0 36 27364.5 37 28570.0 38 28669.0 39 29258.0 40 29726.5 41 29487.0 42 29925.5 43 30878.5 44 31971.0 45 34928.5 46 38829.0 47 39735.0 48 41641.0 49 45837.0 50 49465.0 51 49541.5 52 47169.5 53 47003.0 54 48227.5 55 47962.5 56 40491.0 57 32992.0 58 30226.5 59 27709.0 60 22665.5 61 16933.0 62 13517.5 63 9680.0 64 5786.5 65 3710.0 66 3025.0 67 2529.5 68 1948.5 69 1325.5 70 782.5 71 489.0 72 365.5 73 301.5 74 229.0 75 165.5 76 124.0 77 91.0 78 64.5 79 41.5 80 29.0 81 25.5 82 18.5 83 15.0 84 14.5 85 11.5 86 10.0 87 7.5 88 4.0 89 4.5 90 5.0 91 5.0 92 5.0 93 6.0 94 3.5 95 2.5 96 6.5 97 6.0 98 4.5 99 3.5 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1567199265655201 2 0.0 3 9.328567057471435E-5 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0376874109121846 16-17 0.07588789301253013 18-19 0.02532705956103495 20-21 0.040952409382299604 22-23 0.06805189668425413 24-25 0.017444420397471586 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.02182884691448316 38-39 0.004944140540459861 40-41 0.0058303544109196475 42-43 0.003684783987701217 44-45 0.010867780621954223 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 4.664283528735718E-5 58-59 0.015625349821264657 60-61 0.01707127771517273 62-63 0.029524914736897095 64-65 0.047575691993104324 66-67 0.01707127771517273 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017117920550460086 80-81 0.06021590035597812 82-83 0.05140040448666761 84-85 0.030037985925058023 86-87 0.060635685873564334 88-89 0.03465562661850638 90-91 0.0 92-93 0.0030317842936782168 94-95 0.0 96-97 0.0 98-99 7.92928199885072E-4 100-101 0.04724919214609283 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1071976.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.88683625837302 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99377198869468 37.653089593280946 2 14.99063329621461 15.25651803907575 3 5.125406920869621 7.824472282194728 4 2.2371123473699686 4.553582788488004 5 1.1592234981874248 2.949460816956093 6 0.6571158250076065 2.006312723396866 7 0.40960831086981214 1.4590569731710619 8 0.25648265706472406 1.0441272778532042 9 0.1935524431448091 0.8864344333546159 >10 0.7876600584556718 7.100375556974958 >50 0.08145886169172693 2.8840617149512364 >100 0.09443068838781189 10.213247344665973 >500 0.010018186551249052 3.402496114366118 >1k 0.003524917490254296 2.7667643412704375 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2983 0.2782711553243729 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 2529 0.2359194608834526 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2195 0.20476204691149805 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1924 0.17948163018575045 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1729 0.16129092442368115 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1619 0.15102950066046256 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1553 0.14487264640253142 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1525 0.1422606476264394 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1453 0.13554407934505996 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1384 0.12910736807540465 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1376 0.12836108271080696 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1311 0.12229751412345052 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1195 0.11147637633678366 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1172 0.10933080591356521 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1151 0.10737180683149622 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1113 0.10382695134965708 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 9.328567057471435E-5 0.0 0.0 0.0 5 0.0 9.328567057471435E-5 0.0 0.0 0.0 6 0.0 9.328567057471435E-5 0.0 0.0 0.0 7 0.0 9.328567057471435E-5 0.0 0.0 0.0 8 0.0 9.328567057471435E-5 0.0 0.0 0.0 9 0.0 9.328567057471435E-5 0.0 0.0 0.0 10-11 0.0 1.865713411494287E-4 0.0 0.0 0.0 12-13 0.0 1.865713411494287E-4 0.0 0.0 0.0 14-15 0.0 1.865713411494287E-4 0.0 0.0 0.0 16-17 0.0 1.865713411494287E-4 0.0 0.0 0.0 18-19 0.0 1.865713411494287E-4 0.0 4.664283528735718E-5 0.0 20-21 0.0 1.865713411494287E-4 0.0 1.865713411494287E-4 0.0 22-23 0.0 1.865713411494287E-4 0.0 2.798570117241431E-4 0.0 24-25 0.0 1.865713411494287E-4 0.0 6.063568587356433E-4 0.0 26-27 0.0 1.865713411494287E-4 0.0 9.328567057471436E-4 0.0 28-29 0.0 2.798570117241431E-4 0.0 0.0014459278939080726 0.0 30-31 0.0 2.798570117241431E-4 0.0 0.0030317842936782168 0.0 32-33 0.0 5.597140234482862E-4 0.0 0.0067165682813794345 0.0 34-35 0.0 5.597140234482862E-4 0.0 0.010401352269080653 0.0 36-37 0.0 5.597140234482862E-4 0.0 0.019543347985402658 0.0 38-39 0.0 5.597140234482862E-4 0.0 0.038433696276782316 0.0 40-41 4.664283528735718E-5 5.597140234482862E-4 0.0 0.06408725568482876 0.0 42-43 9.328567057471435E-5 5.597140234482862E-4 0.0 0.08488996022299006 0.0 44-45 9.328567057471435E-5 5.597140234482862E-4 0.0 0.1114297335014963 0.0 46-47 9.328567057471435E-5 6.063568587356433E-4 0.0 0.14729807383747395 0.0 48-49 9.328567057471435E-5 6.529996940230006E-4 0.0 0.1850787704202333 0.0 50-51 9.328567057471435E-5 6.529996940230006E-4 0.0 0.22444532340276274 0.0 52-53 9.328567057471435E-5 6.529996940230006E-4 0.0 0.2676832317141429 0.0 54-55 9.328567057471435E-5 8.395710351724292E-4 0.0 0.3098017119786264 0.0 56-57 9.328567057471435E-5 8.395710351724292E-4 0.0 0.36302118704150094 0.0 58-59 9.328567057471435E-5 0.0010261423763218579 0.0 0.4212314454801227 0.0 60-61 9.328567057471435E-5 0.0010261423763218579 0.0 0.48956319917610097 0.0 62-63 9.328567057471435E-5 0.0010261423763218579 0.0 0.5597140234482862 0.0 64-65 9.328567057471435E-5 0.0010261423763218579 0.0 0.6321037038142645 0.0 66-67 9.328567057471435E-5 0.001072785211609215 0.0 0.7143350224258752 0.0 68-69 9.328567057471435E-5 0.0011194280468965723 0.0 0.8051019798950723 0.0 70-71 9.328567057471435E-5 0.0011194280468965723 0.0 0.9063635753039248 0.0 72-73 9.328567057471435E-5 0.0011194280468965723 0.0 1.022877377851743 0.0 74-75 9.328567057471435E-5 0.0011194280468965723 0.0 1.1425162503638142 0.0 76-77 9.328567057471435E-5 0.0011194280468965723 0.0 1.2671459062516326 0.0 78-79 9.328567057471435E-5 0.0011194280468965723 0.0 1.4173358358769228 0.0 80-81 9.328567057471435E-5 0.0011194280468965723 0.0 1.5834309723352016 0.0 82-83 9.328567057471435E-5 0.0011194280468965723 0.0 1.7752263110368143 0.0 84-85 9.328567057471435E-5 0.0011660708821839296 0.0 1.9619375806921049 0.0 86-87 9.328567057471435E-5 0.0012127137174712866 0.0 2.1586770599341776 0.0 88-89 9.328567057471435E-5 0.0012127137174712866 0.0 2.3853612394307335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 845 0.0 51.213947 1 GTATCAA 1660 0.0 43.545074 1 CCGTGCG 350 0.0 42.085464 9 AACCGTG 380 0.0 41.23104 7 AAACCGT 370 0.0 39.77901 6 ACCGTGC 395 0.0 36.062737 8 ATCAACG 1995 0.0 34.74593 3 TCAACGC 2195 0.0 31.796312 4 GCCCATA 1375 0.0 30.435717 1 CCCATAA 1400 0.0 30.18255 2 CCATAAT 1390 0.0 29.374985 3 CGCAGAG 2505 0.0 27.295387 8 ACGCAGA 2580 0.0 26.315422 7 TATCAAC 2690 0.0 26.298317 2 GTACATG 4215 0.0 25.94979 1 CATAATA 1615 0.0 25.282494 4 TACATGG 4355 0.0 24.96556 2 GTCTAAT 820 0.0 24.937801 1 ATAATAA 1690 0.0 24.72236 5 ACATGGG 4380 0.0 24.281075 3 >>END_MODULE