##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224554_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1071976 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.163796577535315 34.0 33.0 34.0 31.0 34.0 2 33.29290301275402 34.0 34.0 34.0 31.0 34.0 3 33.40775446465219 34.0 34.0 34.0 31.0 34.0 4 36.62912695806622 37.0 37.0 37.0 35.0 37.0 5 36.66248031672351 37.0 37.0 37.0 35.0 37.0 6 36.6961424509504 37.0 37.0 37.0 36.0 37.0 7 36.668491645335344 37.0 37.0 37.0 35.0 37.0 8 36.65537754576595 37.0 37.0 37.0 35.0 37.0 9 38.498544743539036 39.0 39.0 39.0 37.0 39.0 10-11 38.516254561669285 39.0 39.0 39.0 37.5 39.0 12-13 38.49762541325552 39.0 39.0 39.0 37.0 39.0 14-15 40.094442879318194 41.0 40.0 41.0 38.0 41.0 16-17 40.10184229870818 41.0 40.0 41.0 38.0 41.0 18-19 40.092826238647135 41.0 40.0 41.0 38.0 41.0 20-21 40.093705456092295 41.0 40.0 41.0 38.0 41.0 22-23 40.01978495787219 41.0 40.0 41.0 38.0 41.0 24-25 39.97154227333448 41.0 40.0 41.0 38.0 41.0 26-27 39.902254807943464 41.0 40.0 41.0 38.0 41.0 28-29 39.87718195183474 41.0 40.0 41.0 38.0 41.0 30-31 39.81407093069248 41.0 40.0 41.0 38.0 41.0 32-33 39.766413613737626 41.0 40.0 41.0 37.0 41.0 34-35 39.689690347545096 41.0 40.0 41.0 37.0 41.0 36-37 39.56800711956238 41.0 40.0 41.0 37.0 41.0 38-39 39.45666507459122 41.0 40.0 41.0 36.0 41.0 40-41 39.324643928595414 41.0 39.0 41.0 36.0 41.0 42-43 39.22301432121615 41.0 39.0 41.0 35.0 41.0 44-45 38.974876303200816 41.0 39.0 41.0 35.0 41.0 46-47 38.744762476025585 40.5 38.0 41.0 35.0 41.0 48-49 38.64327186429547 40.0 38.0 41.0 35.0 41.0 50-51 38.47061874519579 40.0 37.5 41.0 35.0 41.0 52-53 38.2108983783219 40.0 37.0 41.0 35.0 41.0 54-55 38.01687444495026 40.0 36.5 41.0 34.5 41.0 56-57 37.78174697940999 39.5 35.5 41.0 34.0 41.0 58-59 37.5066391411748 39.0 35.0 41.0 34.0 41.0 60-61 37.25317544422636 39.0 35.0 41.0 34.0 41.0 62-63 37.04044726747614 38.5 35.0 41.0 33.0 41.0 64-65 36.76886376187527 37.5 35.0 41.0 33.0 41.0 66-67 36.50198092121465 37.0 35.0 40.0 33.0 41.0 68-69 36.2379390956514 36.5 35.0 40.0 33.0 41.0 70-71 35.95099470510534 36.0 35.0 39.0 32.5 41.0 72-73 35.65231637648604 35.5 35.0 39.0 32.0 41.0 74-75 35.34312335350791 35.0 35.0 38.5 32.0 40.5 76-77 33.52311059202818 34.5 32.5 36.5 29.0 39.0 78-79 34.825239091173685 35.0 34.5 37.0 32.0 39.0 80-81 34.75419272446398 35.0 35.0 36.5 32.0 39.0 82-83 34.5371449547378 35.0 35.0 36.0 32.0 38.0 84-85 34.3267512518937 35.0 35.0 36.0 32.0 37.0 86-87 34.13166106330739 35.0 35.0 35.5 32.0 37.0 88-89 33.97652559385658 35.0 35.0 35.0 32.0 36.5 90-91 33.824389258714746 35.0 34.0 35.0 31.5 36.0 92-93 33.72572800137316 35.0 34.0 35.0 31.0 36.0 94-95 33.62810594640179 35.0 34.0 35.0 31.0 36.0 96-97 33.576469062740216 35.0 34.0 35.0 31.0 35.5 98-99 33.54853793368508 35.0 34.0 35.0 31.0 35.0 100-101 32.718447521213164 34.5 33.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 7.0 14 22.0 15 66.0 16 131.0 17 329.0 18 586.0 19 945.0 20 1315.0 21 1870.0 22 2560.0 23 2646.0 24 2445.0 25 3152.0 26 4063.0 27 5489.0 28 6989.0 29 8071.0 30 8576.0 31 9408.0 32 11351.0 33 15183.0 34 25942.0 35 52594.0 36 142585.0 37 295707.0 38 346291.0 39 123613.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.32668835727831 20.063815766656262 13.940857932117948 23.668637943947484 2 15.413871206071777 20.57825921475854 39.49164906677015 24.51622051239953 3 18.058706538206078 28.11284954140764 29.584430994723764 24.244012925662513 4 12.417535467211954 17.980253289252744 40.44931976089017 29.15289148264513 5 13.230426800600014 38.8296006627014 35.198829078262946 12.741143458435635 6 28.09232669388121 38.25505421763174 20.416315290640835 13.236303797846222 7 25.75766621640783 31.833548512280124 24.13692097584274 18.2718642954693 8 25.618483995910356 34.363642469607534 21.241613618215332 18.77625991626678 9 26.74481518242946 15.231777577109934 21.126219243714413 36.8971879967462 10-11 25.839477749501853 25.133491794592416 28.348629073785236 20.678401382120494 12-13 26.290280752554164 23.348750345156983 28.374562490205 21.986406412083852 14-15 23.571283312312964 25.093938670268738 25.66685261610335 25.667925401314957 16-17 23.013388359440885 27.36619103412763 26.654188153466123 22.966232452965365 18-19 23.068380262244677 26.86599326850601 27.58308021821384 22.48254625103547 20-21 24.577855475028613 25.502417518449725 26.840704984388513 23.079022022133145 22-23 24.696234284642816 26.150951387223976 26.10743301295476 23.045381315178446 24-25 24.031819846124783 25.88205387731495 26.472367528084913 23.61375874847536 26-27 23.51739137938353 26.95713946547122 26.692202600206073 22.833266554939183 28-29 23.379792777290863 26.823367198771198 27.14213548631755 22.654704537620397 30-31 23.56480023881321 25.966785373623736 27.101661197750865 23.366753189812194 32-33 23.582439304702962 26.026762788445794 27.38146045587881 23.009337450972435 34-35 24.150510570574042 25.96754663049542 26.580921657782447 23.30102114114809 36-37 23.18164920399999 26.024169891697728 27.303096636188044 23.491084268114243 38-39 23.35266834332112 26.241072561326 26.623590453517615 23.782668641835265 40-41 23.704075464376068 26.150632103703813 26.942487518377277 23.202804913542842 42-43 23.758647581662277 26.185101158981173 27.075139741934525 22.981111517422033 44-45 23.976529078128653 25.757606148825495 26.778196616317413 23.48766815672844 46-47 23.63397448016226 25.738532527640267 26.450212509715232 24.177280482482246 48-49 23.34752221618969 25.748297987063022 26.9385409611872 23.965638835560082 50-51 23.668113838369514 26.026375590498297 26.489399016395886 23.8161115547363 52-53 23.958652059374465 26.137152324305767 26.050956364694734 23.853239251625034 54-55 23.896477159936417 25.498471980715987 26.48804637417256 24.11700448517504 56-57 23.955803238863 26.058820483660384 26.052989653308156 23.932386624168466 58-59 24.41791504422301 25.862027935971703 26.281464130482966 23.43859288932232 60-61 23.818586376808483 26.387427617492833 26.213770254387974 23.580215751310714 62-63 23.5836903064994 25.90057986372829 26.63529780517474 23.880432024597564 64-65 24.065417509347224 25.687282177959208 26.21971014276439 24.027590169929177 66-67 23.663869340358364 25.87072844914438 26.151191817727266 24.31421039276999 68-69 23.87133667171653 26.01765338029956 26.66463614857049 23.44637379941342 70-71 24.258798704448605 25.697916744404726 26.455023246789107 23.58826130435756 72-73 23.91881907803906 25.766761569288864 26.596584251886235 23.717835100785837 74-75 23.879219310880096 25.541150175003917 26.62284416815302 23.956786345962968 76-77 23.818241606011348 25.08133370958677 26.21312580313394 24.887298881267945 78-79 23.872181152578804 25.0985173879458 26.412315793008993 24.616985666466398 80-81 23.358411585284795 25.955454344878287 26.4488719451186 24.237262124718317 82-83 23.380976346720114 26.032880722373996 26.739619885154887 23.846523045751006 84-85 23.57008522769676 25.373664119288925 27.09944101974715 23.956809633267163 86-87 23.45766136555296 26.251147413748072 26.496395441688993 23.794795779009977 88-89 23.86252117584722 25.64068598550714 25.8817361582722 24.61505668037344 90-91 23.755475868862735 25.71051030993231 26.127823757248297 24.406190063956657 92-93 23.749552228781244 25.597541362866334 26.66477607707635 23.98813033127607 94-95 23.74694023000515 25.51535668709001 26.372185571318763 24.36551751158608 96-97 23.785607140458367 26.17045530870094 26.49550922781853 23.548428323022158 98-99 22.454933692545357 26.492943871877728 26.856198273095664 24.19592416248125 100-101 23.3641897950106 25.846242312138944 26.384538443622663 24.405029449227793 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 2.5 2 2.0 3 2.5 4 3.5 5 3.0 6 4.0 7 12.0 8 20.0 9 28.0 10 29.0 11 26.0 12 31.0 13 39.5 14 48.0 15 58.5 16 73.5 17 91.0 18 94.0 19 95.5 20 116.0 21 163.5 22 234.0 23 300.0 24 421.0 25 615.0 26 893.5 27 1288.0 28 2029.0 29 3432.0 30 5701.0 31 9073.0 32 13548.5 33 17873.0 34 21720.5 35 24920.0 36 27403.5 37 28723.5 38 28733.5 39 29174.5 40 29681.0 41 29567.5 42 30245.0 43 31432.0 44 32901.5 45 35577.5 46 38225.0 47 40072.5 48 42133.0 49 46394.5 50 51104.0 51 50172.5 52 46220.5 53 45779.0 54 47720.5 55 47269.0 56 39730.0 57 32732.5 58 30636.0 59 28774.0 60 23164.5 61 16450.5 62 12853.0 63 8775.0 64 5056.0 65 3197.0 66 2534.0 67 2075.5 68 1535.0 69 986.0 70 546.0 71 376.0 72 279.0 73 223.0 74 184.0 75 128.5 76 78.0 77 52.0 78 36.0 79 23.5 80 13.0 81 5.5 82 4.5 83 2.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.48088763181265254 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 8.395710351724293E-4 22-23 0.0013992850586207154 24-25 3.264998470115003E-4 26-27 0.002098927587931073 28-29 0.0034982126465517888 30-31 7.92928199885072E-4 32-33 2.3321417643678592E-4 34-35 0.0035448554818391454 36-37 0.002098927587931073 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009002067210459937 46-47 0.07915289148264514 48-49 9.328567057471437E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.008162496175287507 58-59 0.039040053135517956 60-61 0.030364485772069523 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 3.264998470115003E-4 78-79 0.007835996328276007 80-81 0.006016925752069076 82-83 9.794995410345008E-4 84-85 0.0022388560937931447 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06767875400195528 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1071976.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.66160506822509 #Duplication Level Percentage of deduplicated Percentage of total 1 72.17545764913511 35.12173615740619 2 15.81816000074362 15.394741097243624 3 5.608832252091905 8.188043398356594 4 2.410620136543225 4.692185802159091 5 1.2780975123919656 3.1097138193349383 6 0.7161256518243801 2.0908694188981953 7 0.4211342899436338 1.4345149348547155 8 0.31085493258691965 1.2101359970443535 9 0.20057927697246566 0.8784458604813833 >10 0.8581475985358842 7.471238916773604 >50 0.0845702939109378 2.925069007711978 >100 0.1026227441666034 10.934524006541041 >500 0.010185403131476468 3.3175019515596524 >1k 0.004612258021800665 3.231279631634691 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 2250 0.20989275879310731 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1907 0.1778957737859803 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1835 0.17117920550460086 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1715 0.15998492503563513 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1674 0.15616021254207182 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1651 0.1540146421188534 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1587 0.14804435920207168 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1567 0.1461786457905774 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1505 0.14039493421494512 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1489 0.13890236348574966 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1471 0.13722322141540483 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1407 0.1312529384986231 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1389 0.12957379642827824 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1305 0.12173780010000224 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1291 0.12043180071195624 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 1287 0.12005865802965739 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1239 0.1155809458420711 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1216 0.11343537541885265 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1210 0.11287566139540436 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1209 0.11278237572482966 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1163 0.1084912348783928 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1118 0.10429337970253065 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.865713411494287E-4 0.0 0.0 0.0 6 0.0 1.865713411494287E-4 0.0 0.0 0.0 7 0.0 1.865713411494287E-4 0.0 0.0 0.0 8 0.0 1.865713411494287E-4 0.0 0.0 0.0 9 0.0 1.865713411494287E-4 0.0 0.0 0.0 10-11 0.0 1.865713411494287E-4 0.0 0.0 0.0 12-13 0.0 1.865713411494287E-4 0.0 0.0 0.0 14-15 0.0 2.798570117241431E-4 0.0 0.0 0.0 16-17 0.0 2.798570117241431E-4 0.0 0.0 0.0 18-19 0.0 2.798570117241431E-4 0.0 4.664283528735718E-5 0.0 20-21 0.0 2.798570117241431E-4 0.0 1.865713411494287E-4 0.0 22-23 0.0 2.798570117241431E-4 0.0 2.798570117241431E-4 0.0 24-25 0.0 3.731426822988574E-4 0.0 5.597140234482862E-4 0.0 26-27 0.0 4.664283528735718E-4 0.0 8.395710351724292E-4 0.0 28-29 0.0 4.664283528735718E-4 0.0 0.0012127137174712866 0.0 30-31 0.0 5.13071188160929E-4 0.0 0.0028452129525287882 0.0 32-33 4.664283528735718E-5 5.597140234482862E-4 0.0 0.006529996940230005 0.0 34-35 9.328567057471435E-5 5.597140234482862E-4 0.0 0.010354709433793293 0.0 36-37 9.328567057471435E-5 6.063568587356433E-4 0.0 0.01968327649126473 0.0 38-39 9.328567057471435E-5 6.529996940230006E-4 0.0 0.03857362478264439 0.0 40-41 9.328567057471435E-5 6.529996940230006E-4 0.0 0.06464696970827705 0.0 42-43 9.328567057471435E-5 6.529996940230006E-4 0.0 0.08568288842287514 0.0 44-45 9.328567057471435E-5 6.529996940230006E-4 0.0 0.11226930453666872 0.0 46-47 9.328567057471435E-5 6.529996940230006E-4 0.0 0.14907050157839355 0.0 48-49 9.328567057471435E-5 6.529996940230006E-4 0.0 0.18764412636103794 0.0 50-51 9.328567057471435E-5 6.529996940230006E-4 0.0 0.22715060784942948 0.0 52-53 9.328567057471435E-5 6.529996940230006E-4 0.0 0.270575087501959 0.0 54-55 9.328567057471435E-5 6.529996940230006E-4 0.0 0.3129267819428793 0.0 56-57 9.328567057471435E-5 6.529996940230006E-4 0.0 0.3665193996880527 0.0 58-59 9.328567057471435E-5 6.529996940230006E-4 0.0 0.42594237184414574 0.0 60-61 9.328567057471435E-5 6.529996940230006E-4 0.0 0.49558012492817005 0.0 62-63 9.328567057471435E-5 6.529996940230006E-4 0.0 0.5670835914236886 0.0 64-65 9.328567057471435E-5 7.929281998850721E-4 0.0 0.64012627148369 0.0 66-67 9.328567057471435E-5 8.395710351724292E-4 0.0 0.724503160518519 0.0 68-69 9.328567057471435E-5 8.395710351724292E-4 0.0 0.8169959028933483 0.0 70-71 9.328567057471435E-5 8.395710351724292E-4 0.0 0.9202631402195571 0.0 72-73 9.328567057471435E-5 8.395710351724292E-4 0.0 1.0385027276730077 0.0 74-75 9.328567057471435E-5 8.395710351724292E-4 0.0 1.1616398128316305 0.0 76-77 9.328567057471435E-5 8.395710351724292E-4 0.0 1.288228467801518 0.0 78-79 9.328567057471435E-5 8.395710351724292E-4 0.0 1.4406572535206013 0.0 80-81 9.328567057471435E-5 8.395710351724292E-4 0.0 1.6092244602491101 0.0 82-83 9.328567057471435E-5 8.395710351724292E-4 0.0 1.8034918692209527 0.0 84-85 9.328567057471435E-5 8.395710351724292E-4 0.0 1.9925352806406114 0.0 86-87 9.328567057471435E-5 8.395710351724292E-4 0.0 2.193192758046822 0.0 88-89 9.328567057471435E-5 8.395710351724292E-4 0.0 2.422395650648895 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 905 0.0 50.102116 1 AAACCGT 275 0.0 50.07635 6 CCGTGCG 285 0.0 48.319286 9 GTATCAA 1880 0.0 47.982735 1 GCGTAAT 60 1.4435773E-6 47.728855 1 ACCGTGC 310 0.0 47.48619 8 AACCGTG 330 0.0 44.608242 7 ATCAACG 2295 0.0 37.657898 3 TCAACGC 2450 0.0 35.275455 4 AATGCCG 215 1.8189894E-12 28.712584 9 CGCAGAG 3025 0.0 28.570208 8 AATGCGG 285 0.0 28.325098 7 ACGCAGA 3060 0.0 28.243422 7 GTCTAAT 795 0.0 28.217058 1 CAACGCA 3065 0.0 28.197348 5 AACGCAG 3140 0.0 27.523846 6 TATCAAC 3190 0.0 27.390156 2 ATGCGGG 295 0.0 27.364923 8 GTACATG 4705 0.0 26.37514 1 GTATATA 730 0.0 25.498978 1 >>END_MODULE