##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224553_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1062104 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.15850331041028 34.0 33.0 34.0 31.0 34.0 2 33.29299390643477 34.0 34.0 34.0 31.0 34.0 3 33.407524121931566 34.0 34.0 34.0 31.0 34.0 4 36.62181481286202 37.0 37.0 37.0 35.0 37.0 5 36.650553053185 37.0 37.0 37.0 35.0 37.0 6 36.68600814986103 37.0 37.0 37.0 36.0 37.0 7 36.66650064400473 37.0 37.0 37.0 35.0 37.0 8 36.651254491085616 37.0 37.0 37.0 35.0 37.0 9 38.49204691819257 39.0 39.0 39.0 37.0 39.0 10-11 38.51702281509155 39.0 39.0 39.0 37.5 39.0 12-13 38.50896286992611 39.0 39.0 39.0 37.0 39.0 14-15 40.11801104223315 41.0 40.0 41.0 38.0 41.0 16-17 40.12497363723327 41.0 40.0 41.0 38.0 41.0 18-19 40.11003960064174 41.0 40.0 41.0 38.0 41.0 20-21 40.10637423453824 41.0 40.0 41.0 38.0 41.0 22-23 40.03057939712119 41.0 40.0 41.0 38.0 41.0 24-25 39.997174947086165 41.0 40.0 41.0 38.0 41.0 26-27 39.93268832430722 41.0 40.0 41.0 38.0 41.0 28-29 39.90255097429254 41.0 40.0 41.0 38.0 41.0 30-31 39.84315660236662 41.0 40.0 41.0 38.0 41.0 32-33 39.802902540617495 41.0 40.0 41.0 38.0 41.0 34-35 39.728006391087874 41.0 40.0 41.0 37.0 41.0 36-37 39.613369312233075 41.0 40.0 41.0 37.0 41.0 38-39 39.509983014846 41.0 40.0 41.0 36.5 41.0 40-41 39.3793738654595 41.0 39.0 41.0 36.0 41.0 42-43 39.2823183981983 41.0 39.0 41.0 35.5 41.0 44-45 39.04585709120764 41.0 39.0 41.0 35.0 41.0 46-47 38.82103494573036 40.5 38.5 41.0 35.0 41.0 48-49 38.72569164601583 40.0 38.0 41.0 35.0 41.0 50-51 38.56665637263394 40.0 38.0 41.0 35.0 41.0 52-53 38.323725830992075 40.0 37.0 41.0 35.0 41.0 54-55 38.12898501465017 40.0 36.5 41.0 35.0 41.0 56-57 37.90181375835135 40.0 36.0 41.0 34.0 41.0 58-59 37.63299639206707 39.0 35.0 41.0 34.0 41.0 60-61 37.37471612949391 39.0 35.0 41.0 34.0 41.0 62-63 37.14705339590097 38.5 35.0 41.0 34.0 41.0 64-65 36.870139364883286 37.5 35.0 40.5 33.0 41.0 66-67 36.575082571951526 37.0 35.0 40.0 33.0 41.0 68-69 36.29542634242974 36.5 35.0 40.0 33.0 41.0 70-71 35.987433434013994 36.0 35.0 39.0 33.0 41.0 72-73 35.67300989356974 35.5 35.0 39.0 32.5 41.0 74-75 35.35029196764158 35.0 35.0 38.5 32.0 40.0 76-77 33.5165388700165 34.5 32.5 35.5 29.0 38.5 78-79 34.80962410460746 35.0 34.5 37.0 32.0 39.0 80-81 34.73735669953225 35.0 35.0 36.5 33.0 39.0 82-83 34.52885969735544 35.0 35.0 36.0 32.0 37.0 84-85 34.324000286224326 35.0 35.0 36.0 32.0 37.0 86-87 34.13813148241603 35.0 35.0 35.5 32.0 37.0 88-89 33.990923676024195 35.0 35.0 35.0 32.0 36.0 90-91 33.84749186520341 35.0 34.0 35.0 32.0 36.0 92-93 33.75987897607014 35.0 34.0 35.0 31.5 36.0 94-95 33.66222940503002 35.0 34.0 35.0 31.0 36.0 96-97 33.61575373033149 35.0 34.0 35.0 31.0 35.0 98-99 33.57633527413511 35.0 34.0 35.0 31.0 35.0 100-101 32.73944406574121 34.5 33.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 13.0 15 53.0 16 116.0 17 283.0 18 478.0 19 800.0 20 1131.0 21 1669.0 22 2372.0 23 2360.0 24 2162.0 25 2806.0 26 3544.0 27 4747.0 28 6147.0 29 7225.0 30 7947.0 31 9327.0 32 11139.0 33 15472.0 34 25655.0 35 51785.0 36 140483.0 37 298869.0 38 359198.0 39 106265.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.56808913769178 18.320466990997502 12.750118005847794 24.36132586546293 2 16.22289342663242 19.2883182814489 38.89025933430248 25.5985289576162 3 20.130796984099486 25.02664522494972 27.84200040673983 27.00055738421096 4 12.901090665320911 16.264885547931275 38.311973215429 32.522050571318815 5 13.906171147081642 37.702334234688884 34.667132408878985 13.724362209350497 6 31.561692640268753 35.999864420056795 18.77763382870227 13.660809110972183 7 28.273596559282332 30.20099726580448 21.937588032810346 19.587818142102844 8 26.320774613408854 34.46093791191823 19.822823376995096 19.395464097677817 9 26.51924858582587 15.394066871040875 19.67848722912257 38.40819731401068 10-11 26.452070607021533 24.60319328427348 27.71258746789392 21.23214864081107 12-13 26.8497246973931 22.49977403342799 27.562743384828604 23.087757884350307 14-15 23.72013475139911 24.662132898473217 24.821815942694876 26.795916407432795 16-17 23.59006274338483 27.160899497600987 25.912245881759226 23.33679187725496 18-19 23.467522954437605 26.57912972740899 26.956211444453647 22.99713587369975 20-21 24.5195811293539 25.299267296491646 26.68040681898212 23.500744755172327 22-23 24.405618536632673 25.97422161838222 25.91457515666023 23.705584688324876 24-25 24.165545461307353 25.500587985511736 26.30554909561332 24.028317457567596 26-27 23.97786028933026 26.57527939450518 26.273087502889396 23.173772813275164 28-29 23.613897883454904 26.586938038398923 26.627660746416637 23.171503331729536 30-31 23.818434748222266 25.64312598419637 26.73789364912355 23.800545618457818 32-33 23.70856512571515 25.939515310890133 26.875064435810636 23.47685512758408 34-35 24.403440641125652 25.655430270806196 26.197626426519165 23.743502661548984 36-37 23.492350887500425 25.723342033210177 26.794490831233688 23.98981624805571 38-39 23.676965720871028 26.00093776127385 26.184865135617603 24.13723138223752 40-41 24.114634725036343 25.890731981048937 26.526874957631268 23.467758336283453 42-43 23.959235630409076 25.85462440589622 26.712120470311756 23.474019493382944 44-45 24.270376011355904 25.538546284024754 26.39829002285776 23.792787681761578 46-47 23.919113108783634 25.53821726573285 26.221006657337913 24.321662968145606 48-49 23.467359133562724 25.65849713279349 26.72318381615983 24.15095991748396 50-51 23.96968658436462 25.787352274353548 26.252278496267785 23.990682645014047 52-53 24.123213980558393 26.064456053482548 25.72635341094347 24.08597655501559 54-55 24.161004948667927 25.378917695442254 26.21499401188584 24.245083344003977 56-57 24.197531212939122 25.71562951527726 25.900230645482498 24.18660862630112 58-59 24.444417234427224 25.816084667945432 26.189918908392716 23.549579189234628 60-61 24.132881085207146 26.073583086937212 25.894689851682017 23.898845976173625 62-63 23.888715229393732 25.656950731755085 26.397838629738708 24.05649540911248 64-65 24.13577201479328 25.391063398687884 26.058418008029342 24.41474657848949 66-67 23.678566317422774 25.71815001167494 25.9232617521448 24.680021918757486 68-69 24.065722377469626 25.69475305619789 26.342853430549173 23.89667113578331 70-71 24.329397121185874 25.57447293297078 26.072729224256758 24.023400721586587 72-73 23.828645782333933 25.695365048997086 26.48088134495304 23.995107823715944 74-75 24.11793007087818 25.407398898789573 26.313195317972628 24.161475712359618 76-77 24.033332015192517 24.97297811321323 26.174463469610266 24.81922640198399 78-79 24.019916631121433 24.98994846647025 26.180078284262077 24.81005661814624 80-81 23.713321403535534 25.691577534505317 26.114204980667044 24.48089608129211 82-83 23.612848373804425 25.774753776849636 26.500724275736033 24.111673573609906 84-85 23.932295087138016 25.268541573394458 26.68397233917047 24.11519100029706 86-87 23.533571100381884 26.08920595346595 26.249689295963485 24.12753365018868 88-89 24.106019749478396 25.258072655785117 25.67032042059911 24.965587174137372 90-91 23.91404231600672 25.51929942830457 25.83687661471946 24.729781640969247 92-93 24.038465159720708 25.59132627313333 26.336827655295526 24.03338091185044 94-95 23.944877337812493 25.43286721451007 26.026735611578527 24.595519836098916 96-97 24.117835918139843 25.759765522020444 26.205107974360324 23.91729058547939 98-99 22.783879921363635 26.02565285508764 26.568584620715107 24.62188260283362 100-101 23.517770548271088 25.64978410406721 26.177958923714257 24.654486423947443 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 2.5 2 1.5 3 4.0 4 5.0 5 3.5 6 5.5 7 15.5 8 28.5 9 37.0 10 34.5 11 32.0 12 41.0 13 51.0 14 47.5 15 63.0 16 86.0 17 86.5 18 99.0 19 110.5 20 138.5 21 196.5 22 245.0 23 316.5 24 430.0 25 585.0 26 850.0 27 1229.0 28 1695.5 29 2382.0 30 3725.5 31 5745.5 32 8613.0 33 12419.5 34 16250.5 35 19715.0 36 23404.0 37 26464.0 38 27662.5 39 28275.0 40 28778.5 41 29020.0 42 29832.5 43 31326.5 44 32899.0 45 35277.0 46 37996.0 47 40218.0 48 41805.0 49 45323.0 50 49909.0 51 49707.5 52 47660.5 53 48725.0 54 50820.5 55 49121.0 56 41463.0 57 35239.5 58 33766.5 59 31969.5 60 26071.5 61 18887.0 62 14881.0 63 10565.0 64 6209.5 65 3796.0 66 2771.5 67 2415.0 68 1752.5 69 1004.5 70 530.0 71 326.0 72 265.0 73 215.5 74 151.0 75 106.5 76 76.5 77 45.5 78 28.5 79 18.0 80 10.5 81 7.0 82 6.0 83 3.5 84 1.5 85 1.0 86 1.0 87 0.5 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4663385129893118 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 9.415273833824182E-4 22-23 0.001176909229228023 24-25 2.824582150147255E-4 26-27 0.0028716585193163755 28-29 0.004048567748544399 30-31 6.119927991985719E-4 32-33 4.707636916912091E-5 34-35 0.0032482694726693427 36-37 0.0018830547667648364 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009556502941331545 46-47 0.08181872961593215 48-49 7.061455375368137E-4 50-51 0.0 52-53 4.707636916912091E-5 54-55 0.0 56-57 0.007955906389581434 58-59 0.03799062991948057 60-61 0.028010439655626943 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 1.8830547667648365E-4 78-79 0.0072497608520446215 80-81 0.0054137824544489045 82-83 8.002982758750556E-4 84-85 0.0023067420892869247 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06713090243516642 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1062104.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.32547575322157 #Duplication Level Percentage of deduplicated Percentage of total 1 71.67250245053849 35.3528028179675 2 15.776025800524208 15.563199562119093 3 5.636498832323343 8.340689594604802 4 2.5390324521692733 5.009559346244728 5 1.3841562864416368 3.4137083672773088 6 0.7613266444027186 2.2531679363260704 7 0.5140337995697317 1.774847320190921 8 0.3411051011287324 1.3460137116020388 9 0.22107894681306123 0.9814341807517871 >10 0.966366059281 8.318542917968696 >50 0.08505911604714211 2.898891949011083 >100 0.09058378887899449 9.506753489495974 >500 0.008981936381863414 3.0249145899422323 >1k 0.003248785499822937 2.215474216497734 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2382 0.22427182272169205 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1840 0.17324103854236494 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1730 0.16288423732515836 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1716 0.16156609898842297 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1648 0.15516371278142255 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1397 0.13153137545852384 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1284 0.12089211602630251 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1276 0.12013889411959658 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1217 0.1145838825576403 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1196 0.11260667505253723 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1171 0.11025285659408118 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1167 0.1098762456407282 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1133 0.10667505253722799 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1124 0.10582767789218382 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1108 0.10432123407877195 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1096 0.10319140121871305 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 9.415273833824183E-5 0.0 4 0.0 0.0 0.0 1.8830547667648365E-4 0.0 5 0.0 0.0 0.0 1.8830547667648365E-4 0.0 6 0.0 0.0 0.0 1.8830547667648365E-4 0.0 7 0.0 0.0 0.0 2.824582150147255E-4 0.0 8 0.0 0.0 0.0 2.824582150147255E-4 0.0 9 0.0 0.0 0.0 5.64916430029451E-4 0.0 10-11 0.0 0.0 0.0 6.590691683676928E-4 0.0 12-13 0.0 0.0 0.0 9.886037525515393E-4 0.0 14-15 0.0 0.0 0.0 0.001129832860058902 0.0 16-17 0.0 0.0 0.0 0.001176909229228023 0.0 18-19 0.0 0.0 0.0 0.0012239855983971438 0.0 20-21 0.0 0.0 0.0 0.0013181383367353856 0.0 22-23 0.0 0.0 0.0 0.0014593674442427483 0.0 24-25 0.0 0.0 0.0 0.0016476729209192321 0.0 26-27 0.0 0.0 0.0 0.002118436612610441 0.0 28-29 0.0 0.0 0.0 0.0025892003043016506 0.0 30-31 0.0 0.0 0.0 0.005837469776970993 0.0 32-33 0.0 0.0 0.0 0.013087230629015616 0.0 34-35 0.0 0.0 0.0 0.021843435294472104 0.0 36-37 0.0 0.0 0.0 0.03606049878354662 0.0 38-39 0.0 0.0 0.0 0.06115220355068807 0.0 40-41 0.0 0.0 0.0 0.09372905101571974 0.0 42-43 0.0 0.0 0.0 0.12272809442389823 0.0 44-45 0.0 0.0 0.0 0.1559640110572976 0.0 46-47 0.0 0.0 0.0 0.19423709919179288 0.0 48-49 0.0 0.0 0.0 0.23448739483139128 0.0 50-51 0.0 0.0 0.0 0.27949240375707085 0.0 52-53 0.0 0.0 0.0 0.32765152941708153 0.0 54-55 0.0 0.0 0.0 0.3767521824604747 0.0 56-57 0.0 0.0 0.0 0.43790438601116277 0.0 58-59 0.0 0.0 0.0 0.5056002048763586 0.0 60-61 0.0 0.0 0.0 0.5805457845935991 0.0 62-63 0.0 0.0 0.0 0.6609992995036267 0.0 64-65 0.0 0.0 0.0 0.7352858100524995 0.0 66-67 0.0 0.0 0.0 0.8262844316564103 0.0 68-69 0.0 0.0 0.0 0.929711214720969 0.0 70-71 0.0 0.0 0.0 1.0475904431204477 0.0 72-73 0.0 0.0 0.0 1.1748378689845815 0.0 74-75 0.0 0.0 0.0 1.300013934605274 0.0 76-77 0.0 0.0 0.0 1.4337108230455775 0.0 78-79 0.0 0.0 0.0 1.5899102159487206 0.0 80-81 0.0 0.0 0.0 1.7615977343085047 0.0 82-83 0.0 0.0 0.0 1.9539988551027019 0.0 84-85 0.0 0.0 0.0 2.1522374456738698 0.0 86-87 0.0 0.0 0.0 2.3646460233649433 0.0 88-89 0.0 0.0 0.0 2.6010635493322685 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 150 0.0 53.821728 9 GGTATCA 860 0.0 44.383373 1 GTATCAA 1420 0.0 42.33611 1 AAACCGT 215 0.0 35.341217 6 ATCAACG 1730 0.0 34.31341 3 ACCGTGC 270 0.0 33.41872 8 TCAACGC 1795 0.0 33.070866 4 GTACATG 3905 0.0 29.690258 1 TATCACG 65 0.005850034 29.224468 2 AACCGTG 280 0.0 28.833069 7 TACATGG 3920 0.0 28.833069 2 TATACCG 135 4.23257E-7 28.14208 5 ATACCGT 190 3.965397E-10 27.494072 6 ACATGGG 4110 0.0 27.26906 3 CGCAGAG 2210 0.0 26.64584 8 ACGCAGA 2235 0.0 26.56027 7 GTCTAAT 565 0.0 26.178337 1 CAACGCA 2275 0.0 26.093275 5 GACCGCA 975 0.0 25.814947 7 AACGCAG 2320 0.0 25.587156 6 >>END_MODULE