##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224552_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 734830 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20196235864078 34.0 31.0 34.0 31.0 34.0 2 32.36206061265871 34.0 31.0 34.0 31.0 34.0 3 32.51258522379326 34.0 31.0 34.0 31.0 34.0 4 35.78774274321952 37.0 37.0 37.0 35.0 37.0 5 35.79583985411592 37.0 37.0 37.0 35.0 37.0 6 35.898225439897665 37.0 37.0 37.0 35.0 37.0 7 35.8629152320945 37.0 37.0 37.0 35.0 37.0 8 35.89625355524407 37.0 37.0 37.0 35.0 37.0 9 37.635693970033884 39.0 39.0 39.0 35.0 39.0 10-11 37.70906740334499 39.0 39.0 39.0 35.0 39.0 12-13 37.717963338459235 39.0 39.0 39.0 35.0 39.0 14-15 39.2222139814651 41.0 40.0 41.0 36.0 41.0 16-17 39.05947906318468 41.0 40.0 41.0 36.0 41.0 18-19 39.13582529292489 41.0 40.0 41.0 36.0 41.0 20-21 39.20327014411497 41.0 40.0 41.0 36.0 41.0 22-23 39.16193677449206 41.0 40.0 41.0 36.0 41.0 24-25 39.10783718683233 41.0 40.0 41.0 36.0 41.0 26-27 38.9423512921356 41.0 39.0 41.0 35.5 41.0 28-29 38.86313705210729 41.0 39.0 41.0 35.0 41.0 30-31 38.79912428725011 41.0 39.0 41.0 35.0 41.0 32-33 38.60708939482601 41.0 39.0 41.0 35.0 41.0 34-35 38.61131554237035 40.5 39.0 41.0 35.0 41.0 36-37 38.62967897336799 40.0 39.0 41.0 35.0 41.0 38-39 38.52707156757345 40.0 39.0 41.0 35.0 41.0 40-41 38.44418777132125 40.0 38.0 41.0 34.0 41.0 42-43 38.30390226310847 40.0 38.0 41.0 34.0 41.0 44-45 38.15141529333315 40.0 38.0 41.0 33.5 41.0 46-47 37.99402378781487 40.0 38.0 41.0 33.0 41.0 48-49 37.80856388552454 40.0 37.5 41.0 33.0 41.0 50-51 36.5508063089422 38.5 35.5 40.0 31.5 40.5 52-53 36.90302246778167 39.0 36.0 40.0 31.5 40.5 54-55 37.39240096348816 40.0 36.0 41.0 33.0 41.0 56-57 37.250674986051195 40.0 35.5 41.0 32.0 41.0 58-59 37.11549950328647 39.0 35.0 41.0 32.0 41.0 60-61 36.87062994161915 39.0 35.0 41.0 32.0 41.0 62-63 36.56427064763278 39.0 35.0 41.0 31.0 41.0 64-65 36.307381979505465 38.0 35.0 41.0 31.0 41.0 66-67 36.035090429078835 37.0 35.0 40.0 31.0 41.0 68-69 35.70435815086482 37.0 35.0 40.0 30.5 41.0 70-71 35.374873099900654 36.0 35.0 39.0 30.0 41.0 72-73 35.032985180245774 36.0 35.0 39.0 30.0 41.0 74-75 34.72736551311188 35.0 34.5 38.5 29.5 40.0 76-77 34.35885783106296 35.0 34.0 37.0 29.0 39.0 78-79 34.10516173808908 35.0 34.0 37.0 29.0 39.0 80-81 33.78627505681587 35.0 34.0 36.0 29.0 39.0 82-83 33.52470843596478 35.0 34.0 36.0 29.0 37.0 84-85 33.302859164704756 35.0 34.0 36.0 29.0 37.0 86-87 33.077149816964464 35.0 34.0 35.0 28.5 36.5 88-89 32.923362546439314 35.0 34.0 35.0 27.5 36.0 90-91 32.7596886354667 35.0 33.5 35.0 27.0 36.0 92-93 32.62515751942627 35.0 33.0 35.0 27.0 36.0 94-95 32.50426152987766 35.0 33.0 35.0 27.0 35.5 96-97 32.38038730046405 35.0 33.0 35.0 26.0 35.0 98-99 32.31858116843351 35.0 33.0 35.0 26.0 35.0 100-101 31.123998748009747 34.5 31.0 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 4.0 7 74.0 8 268.0 9 232.0 10 305.0 11 673.0 12 1212.0 13 1445.0 14 1527.0 15 1622.0 16 1565.0 17 1685.0 18 1905.0 19 2070.0 20 2471.0 21 2994.0 22 3309.0 23 3509.0 24 3557.0 25 3687.0 26 3974.0 27 4387.0 28 5036.0 29 5890.0 30 7239.0 31 9008.0 32 11581.0 33 16253.0 34 25964.0 35 46021.0 36 97386.0 37 183799.0 38 224501.0 39 59663.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.63109291568656 17.841071082994215 12.572060150293964 24.955775851025265 2 16.209735585101313 18.88899473347577 39.216961746254235 25.684307935168675 3 20.547229355401054 23.78811941281577 27.66453147603048 28.0001197557527 4 12.818747193228367 15.728127594137419 37.64666657594273 33.80645863669148 5 14.091286419988297 37.970278840003814 34.227780575099004 13.71065416490889 6 32.4612495407101 35.87292298899065 18.084318822040473 13.581508648258781 7 29.044677000122476 30.174734292285287 21.005130438332674 19.77545826925956 8 26.424479131227628 34.96060313269736 19.642774519276568 18.972143216798443 9 26.462038838915124 15.414721772382729 19.093259665500863 39.029979723201286 10-11 26.27165466842671 24.872963814759878 27.4679177496836 21.387463767129812 12-13 26.680728876066574 22.19581399779541 27.583658805437995 23.539798320700026 14-15 23.494764843380942 24.32731198429521 24.63743256102691 27.540490611296935 16-17 23.856058496153665 26.996590493557893 25.701972229580246 23.445378780708197 18-19 23.65919842862772 26.57897799547945 26.41012081353634 23.351702762356485 20-21 24.523278728697896 25.31692357960444 26.434724599995235 23.725073091702434 22-23 24.358359808750574 25.84883614837491 25.749153308666823 24.04365073420769 24-25 23.906767641846628 25.638081834539715 26.206951934253613 24.24819858936004 26-27 23.882462610399685 26.47898153314372 26.143870010750785 23.49468584570581 28-29 23.699699250166706 26.56328674659445 26.24593443381462 23.49107956942422 30-31 23.832246914252273 25.97124504987548 26.21565532163902 23.980852714233226 32-33 23.67010056747819 25.968387246029696 26.46748227481186 23.894029911680253 34-35 24.25329668086496 25.673284977477785 26.14672781459657 23.926690527060682 36-37 23.722817505689676 25.789204316531094 26.51035030980149 23.97762786797774 38-39 23.74303633727161 26.118251788080098 26.05081815169234 24.087893722955947 40-41 24.28237218658051 25.801462202394728 26.311545465185592 23.604620145839174 42-43 24.05163550304877 25.889879552996746 26.30556835185413 23.75291659210035 44-45 24.137102695684305 25.65701052809227 26.171744481274885 24.034142294948545 46-47 23.97500102064423 25.617081501843963 26.035749765251825 24.37216771225998 48-49 23.668875794401426 25.9477702325708 26.33704394213628 24.046310030891497 50-51 23.916279955908166 26.085829375501817 25.97328633833676 24.024604330253254 52-53 24.009907053332064 26.111481567165196 25.661853762094633 24.216757617408106 54-55 24.088632744988637 25.546657049929916 26.012683205639398 24.352026999442046 56-57 23.96955758474749 26.04792945307078 25.850945116557572 24.131567845624158 58-59 24.084704204246098 26.103224146836588 26.195299851712523 23.61677179720479 60-61 24.098084424687702 26.145888059843692 25.924373293553682 23.83165422191492 62-63 23.69377702544961 25.855268486547594 26.363021936174164 24.08793255182863 64-65 24.32742088656067 25.38900632090596 25.873779302692085 24.40979348984128 66-67 23.65118458383892 25.942090036946574 25.69954519439316 24.707180184821347 68-69 23.775363009131365 25.94940326333982 26.4279493216118 23.847284405917016 70-71 24.03297361294449 25.60401725569179 26.23062477035505 24.13238436100867 72-73 23.79604806553897 25.870881700529374 26.44700134725038 23.886068886681272 74-75 23.95860267000531 25.713770531959774 26.22797109535539 24.09965570267953 76-77 23.83653362002096 25.441190479430613 26.025679408842862 24.696596491705563 78-79 23.86766861621258 25.115727350309854 26.391552481893992 24.625051551583567 80-81 23.81309340223523 25.874567235515794 25.845835418432618 24.466503943816363 82-83 23.563514961556216 26.028492107688894 26.164103974544183 24.24388895621071 84-85 23.894099846654683 25.484657641095726 26.432703322073493 24.188539190176098 86-87 23.563418342301297 26.355798513971436 25.989295637710242 24.091487506017035 88-89 23.97037752994068 25.584162324601557 25.832876721652926 24.61258342380484 90-91 23.695412544398025 25.52080072942041 26.012206904998436 24.77157982118313 92-93 23.565992222399895 25.709493367265353 26.50657829825021 24.21793611208454 94-95 23.838370779636104 25.552712872365035 26.34031000367432 24.268606344324535 96-97 24.061619694351073 25.741395969135716 26.28294979791244 23.914034538600763 98-99 23.330892839645955 25.878509683951535 26.309497240155466 24.48110023624705 100-101 23.77577152908917 25.571456384967384 26.016803656449504 24.635968429493943 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 2.0 2 2.5 3 4.5 4 4.0 5 1.5 6 3.5 7 7.5 8 14.0 9 18.5 10 26.5 11 27.5 12 26.0 13 31.0 14 30.0 15 29.0 16 41.0 17 52.5 18 63.0 19 78.0 20 95.0 21 117.0 22 131.5 23 166.5 24 219.5 25 269.0 26 383.0 27 555.0 28 773.0 29 1131.5 30 1669.5 31 2649.0 32 4519.0 33 7161.0 34 10160.0 35 13270.5 36 16610.5 37 19472.0 38 21093.0 39 21682.5 40 21753.5 41 21892.0 42 22295.0 43 22948.0 44 23533.5 45 25087.5 46 27357.5 47 28343.0 48 29317.5 49 31003.5 50 32782.5 51 33044.5 52 32401.0 53 32683.5 54 33087.0 55 32174.0 56 27948.5 57 24224.5 58 22248.5 59 20091.0 60 17012.5 61 13336.5 62 10720.5 63 7981.0 64 5317.5 65 3613.0 66 2703.5 67 2166.0 68 1620.0 69 1107.5 70 765.0 71 501.5 72 319.5 73 227.5 74 175.5 75 129.0 76 88.5 77 59.5 78 41.0 79 22.5 80 17.5 81 13.5 82 6.0 83 7.0 84 8.0 85 6.0 86 4.5 87 3.0 88 5.0 89 6.0 90 6.0 91 6.0 92 3.5 93 2.5 94 4.5 95 5.0 96 2.5 97 2.0 98 2.5 99 2.0 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14533973844290518 2 0.0 3 1.3608589741845051E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0376957935849108 16-17 0.07614005960562308 18-19 0.02524393397112257 20-21 0.041846413456173535 22-23 0.06817903460664372 24-25 0.017418994869561666 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.022590258971462787 38-39 0.004558877563518093 40-41 0.006532123076085626 42-43 0.003470190384170488 44-45 0.011091000639603717 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.014765319869901884 60-61 0.015785964100540263 62-63 0.030143026278186793 64-65 0.04933113781418831 66-67 0.01639835063892329 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017555080766980116 80-81 0.06157886858184886 82-83 0.05184872691642965 84-85 0.02905433909883919 86-87 0.06212321217152267 88-89 0.03436168909815876 90-91 0.0 92-93 0.0037423621790073896 94-95 0.0 96-97 0.0 98-99 8.165153845107032E-4 100-101 0.04722180640420233 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 734830.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.1373263627859 #Duplication Level Percentage of deduplicated Percentage of total 1 79.83992605438709 51.20719394130917 2 12.870632087586742 16.5097586139379 3 3.656580433275416 7.035698778622872 4 1.4674443197442586 3.7647182101861536 5 0.7074635010053365 2.268740872686919 6 0.3895086729243704 1.4989226925891583 7 0.22767255590938146 1.0221616315546733 8 0.14812599479748575 0.7600324216910935 9 0.09995197753878815 0.5769587343609989 >10 0.4901077670872753 5.749178501429619 >50 0.05107993422486527 2.33029521718262 >100 0.04851461097588415 5.822388225777096 >500 0.0025646490369766344 1.055201632644038 >1k 4.2744150616277237E-4 0.3987505260277354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1749 0.23801423458486995 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1160 0.15785964100540262 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 872 0.11866690254888886 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 812 0.11050174870378184 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 787 0.10709960126832056 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 1.3608589741845051E-4 0.0 0.0 0.0 0.0 16-17 2.7217179483690103E-4 0.0 0.0 0.0 0.0 18-19 2.7217179483690103E-4 0.0 0.0 0.0 0.0 20-21 2.7217179483690103E-4 0.0 0.0 2.7217179483690103E-4 0.0 22-23 2.7217179483690103E-4 0.0 0.0 3.402147435461263E-4 0.0 24-25 3.402147435461263E-4 0.0 0.0 5.443435896738022E-4 0.0 26-27 4.082576922553516E-4 0.0 0.0 6.804294870922527E-4 0.0 28-29 4.082576922553516E-4 0.0 0.0 0.0014969448716029557 0.0 30-31 5.443435896738021E-4 0.0 0.0 0.004558877563518093 0.0 32-33 5.443435896738021E-4 0.0 0.0 0.009730141665419214 0.0 34-35 6.123865383830273E-4 0.0 0.0 0.015105534613448008 0.0 36-37 6.804294870922527E-4 0.0 0.0 0.025039805124994895 0.0 38-39 6.804294870922527E-4 0.0 0.0 0.044976389096797895 0.0 40-41 6.804294870922527E-4 0.0 0.0 0.06953989358082822 0.0 42-43 6.804294870922527E-4 0.0 0.0 0.09396731216744009 0.0 44-45 6.804294870922527E-4 0.0 0.0 0.12186492113822245 0.0 46-47 6.804294870922527E-4 0.0 0.0 0.15350489228801217 0.0 48-49 6.804294870922527E-4 0.0 0.0 0.19405848971871045 0.0 50-51 6.804294870922527E-4 0.0 0.0 0.2321625409958766 0.0 52-53 6.804294870922527E-4 0.0 0.0 0.2729202672727025 0.0 54-55 6.804294870922527E-4 0.0 0.0 0.3168760121388621 0.0 56-57 6.804294870922527E-4 0.0 0.0 0.3706979845678592 0.0 58-59 6.804294870922527E-4 0.0 0.0 0.4300994787910129 0.0 60-61 6.804294870922527E-4 0.0 0.0 0.4981424275002382 0.0 62-63 6.804294870922527E-4 0.0 0.0 0.5699277383884709 0.0 64-65 6.804294870922527E-4 0.0 0.0 0.6463399697889307 0.0 66-67 6.804294870922527E-4 0.0 0.0 0.7419403127253923 0.0 68-69 8.165153845107032E-4 0.0 0.0 0.8488357851475852 0.0 70-71 8.165153845107032E-4 0.0 0.0 0.9648490126968142 0.0 72-73 8.165153845107032E-4 0.0 0.0 1.0910006396037177 0.0 74-75 8.165153845107032E-4 0.0 0.0 1.2142264197161248 0.0 76-77 8.165153845107032E-4 0.0 0.0 1.3431678075201066 0.0 78-79 8.165153845107032E-4 0.0 0.0 1.496400528013282 0.0 80-81 8.165153845107032E-4 0.0 0.0 1.6639222677353946 0.0 82-83 8.165153845107032E-4 0.0 0.0 1.847093885660629 0.0 84-85 8.165153845107032E-4 0.0 0.0 2.0465958112760774 0.0 86-87 8.165153845107032E-4 0.0 0.0 2.2598424125307894 6.804294870922526E-5 88-89 8.165153845107032E-4 0.0 0.0 2.4971762176285672 1.3608589741845051E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGT 70 7.948802E-8 47.474895 6 GTATCAA 930 0.0 42.93313 1 GGTATCA 600 0.0 35.649834 1 ATCAACG 1120 0.0 34.758404 3 TCAACGC 1215 0.0 31.64993 4 ACGCAGA 1360 0.0 28.973646 7 CGCAGAG 1395 0.0 28.931292 8 AATGCGG 135 4.241174E-7 28.13327 7 AAATGCG 140 5.8281694E-7 27.128511 6 AACCGTG 105 6.927392E-5 27.12851 7 GTACATG 2420 0.0 26.319986 1 ACATGGG 2370 0.0 26.241396 3 CAACGCA 1470 0.0 26.159632 5 TACATGG 2470 0.0 25.563402 2 AACGCAG 1535 0.0 25.36118 6 GACCGCA 535 0.0 24.846672 7 TATCAAC 1595 0.0 24.704803 2 ATGCGGG 155 1.4143061E-6 24.506504 8 GTATAGG 195 1.5563273E-8 24.375954 1 AGACCGC 590 0.0 24.139774 6 >>END_MODULE