##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224551_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 57904 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.11379179331307 34.0 33.0 34.0 31.0 34.0 2 33.23269549599337 34.0 33.0 34.0 31.0 34.0 3 33.331945979552366 34.0 34.0 34.0 31.0 34.0 4 36.57771483835314 37.0 37.0 37.0 35.0 37.0 5 36.63757253384913 37.0 37.0 37.0 35.0 37.0 6 36.676585382702406 37.0 37.0 37.0 36.0 37.0 7 36.645689416966015 37.0 37.0 37.0 35.0 37.0 8 36.64259809339597 37.0 37.0 37.0 35.0 37.0 9 38.477911715943634 39.0 39.0 39.0 37.0 39.0 10-11 38.50110527770102 39.0 39.0 39.0 37.5 39.0 12-13 38.482367366675874 39.0 39.0 39.0 37.0 39.0 14-15 40.0346608179055 41.0 40.0 41.0 38.0 41.0 16-17 40.0359819701575 41.0 40.0 41.0 38.0 41.0 18-19 40.06612669245648 41.0 40.0 41.0 38.0 41.0 20-21 40.074675324675326 41.0 40.0 41.0 38.0 41.0 22-23 39.97101236529428 41.0 40.0 41.0 38.0 41.0 24-25 39.92524696048632 41.0 40.0 41.0 38.0 41.0 26-27 39.84726443768997 41.0 40.0 41.0 38.0 41.0 28-29 39.7844622133186 41.0 40.0 41.0 37.5 41.0 30-31 39.659220433821496 41.0 40.0 41.0 37.0 41.0 32-33 39.51279704338215 41.0 40.0 41.0 35.5 41.0 34-35 39.37912752141476 41.0 39.5 41.0 35.0 41.0 36-37 39.204320945012434 41.0 39.0 41.0 35.0 41.0 38-39 39.044375172699645 41.0 39.0 41.0 35.0 41.0 40-41 38.86883462282398 41.0 39.0 41.0 35.0 41.0 42-43 38.70620337109699 41.0 38.5 41.0 35.0 41.0 44-45 38.37127832274109 40.0 38.0 41.0 35.0 41.0 46-47 38.00698570046974 40.0 37.5 41.0 34.0 41.0 48-49 37.7952904807958 40.0 37.0 41.0 34.0 41.0 50-51 37.56517684443216 40.0 37.0 41.0 33.5 41.0 52-53 37.26253799392097 40.0 36.0 41.0 33.0 41.0 54-55 37.01441178502348 39.0 35.0 41.0 33.0 41.0 56-57 36.76661370544349 39.0 35.0 41.0 33.0 41.0 58-59 36.48084760983697 38.5 35.0 41.0 32.0 41.0 60-61 36.2222471677259 38.0 35.0 41.0 32.0 41.0 62-63 36.00704614534402 37.0 35.0 40.5 31.5 41.0 64-65 35.78166447913789 37.0 35.0 40.0 31.0 41.0 66-67 35.502115570599614 36.0 35.0 40.0 31.0 41.0 68-69 35.25383393202542 36.0 35.0 39.5 31.0 41.0 70-71 34.97811895551257 35.0 35.0 39.0 30.0 41.0 72-73 34.70098784194529 35.0 35.0 39.0 30.0 41.0 74-75 34.4223801464493 35.0 35.0 38.5 30.0 40.5 76-77 32.64347886156397 34.5 32.0 35.5 27.0 38.5 78-79 33.966833033987285 35.0 34.0 37.0 30.0 39.0 80-81 33.933510638297875 35.0 35.0 36.5 30.0 39.0 82-83 33.738714078474715 35.0 35.0 36.0 30.0 38.5 84-85 33.543753453992814 35.0 34.5 36.0 30.0 37.0 86-87 33.374559615916 35.0 34.0 35.5 30.0 37.0 88-89 33.19145482177397 35.0 34.0 35.0 29.0 36.5 90-91 33.01571566731141 35.0 34.0 35.0 29.0 36.0 92-93 32.905153357281016 35.0 34.0 35.0 29.0 36.0 94-95 32.80490985078751 35.0 34.0 35.0 29.0 36.0 96-97 32.75080305332965 35.0 34.0 35.0 29.0 36.0 98-99 32.69543554849406 35.0 34.0 35.0 29.0 35.0 100-101 31.847765266648246 34.5 32.5 35.0 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 11.0 16 12.0 17 43.0 18 114.0 19 195.0 20 255.0 21 373.0 22 548.0 23 479.0 24 322.0 25 267.0 26 289.0 27 319.0 28 381.0 29 459.0 30 497.0 31 568.0 32 633.0 33 832.0 34 1478.0 35 3018.0 36 8213.0 37 15955.0 38 16304.0 39 6326.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.939240418481184 19.685271613720353 11.943716709752417 22.431771258046044 2 17.059270516717326 20.23176291793313 37.64506769825919 25.063898867090355 3 18.04711246200608 27.09139264990329 31.32253384912959 23.53896103896104 4 11.28419452887538 16.957377728654325 40.60859353412545 31.149834208344846 5 11.691765681127384 40.44280187897209 35.77645758496823 12.088974854932303 6 27.464423873998346 39.84180712904117 18.68782812931749 14.005940867642996 7 23.856728378004973 33.24986184028737 23.794556507322465 19.09885327438519 8 26.317698259187623 34.33096159159989 20.494266371925946 18.857073777286544 9 25.759878419452885 12.387745233489914 21.51319425255595 40.33918209450124 10-11 25.840183752417794 24.702956617850237 28.954821773970714 20.50203785576126 12-13 25.723611494888093 23.87658883669522 29.466012710693562 20.93378695772313 14-15 23.059719535783366 26.06728378004974 26.313380768168003 24.559615915998894 16-17 22.02265819287096 27.841772589113013 28.04383116883117 22.09173804918486 18-19 21.45447637468914 26.497305885603755 29.841634429400386 22.206583310306716 20-21 23.577818458137607 24.694321635810997 29.834726443769 21.8931334622824 22-23 23.16872037096203 26.10291260459212 28.835044513716788 21.893322510729057 24-25 22.595157502072396 25.6657571152252 29.27863360044211 22.460451782260293 26-27 22.033883669521966 26.570703232937277 29.593810444874276 21.80160265266648 28-29 21.915962903476505 26.922611954475588 29.68239987565411 21.479025266393798 30-31 21.59954407294833 25.54832135949157 30.222437137330754 22.629697430229346 32-33 22.23680574744405 25.7167035092567 30.288063000828956 21.758427742470296 34-35 22.65752502007651 25.897398257445577 29.54225564948578 21.902821072992136 36-37 22.203512771358998 25.73269087957446 29.99930918950659 22.064487159559953 38-39 22.24025974025974 26.157087593257806 28.84688449848024 22.75576816800221 40-41 22.45268029842498 26.16313208068527 29.56704200055264 21.817145620337108 42-43 22.40691489361702 26.3824606244819 29.107660956065214 22.102963525835868 44-45 22.786427973090838 26.11639334352358 28.505919842482967 22.591258840902615 46-47 22.727469127800966 26.060543212437025 28.06021483075381 23.151772829008202 48-49 22.30243161094225 26.089734733351754 28.237254766510084 23.37057888919591 50-51 22.82053053329649 26.304745786128763 27.652666482453714 23.22205719812103 52-53 23.57868195634153 26.772761812655432 26.665688035368884 22.982868195634154 54-55 22.64178640508428 26.128592152528324 27.435064935064936 23.794556507322465 56-57 23.649237943093997 26.498855835240278 26.64392729156772 23.207978930098008 58-59 23.972673725666315 26.401292038761166 26.982536748829737 22.643497486742785 60-61 23.26280335089386 26.699196821832626 27.189740046636153 22.848259780637363 62-63 23.42325227963526 26.103550704614538 27.500690798563138 22.972506217187068 64-65 23.685755733628074 26.003384912959383 27.19846642718983 23.112392926222714 66-67 23.02172561481072 25.89372064106107 27.03871925946394 24.045834484664272 68-69 23.193561757391546 26.466219950262506 27.34785161646864 22.992366675877314 70-71 23.706479690522244 25.609629731970156 27.62589803813208 23.05799253937552 72-73 23.54414202818458 26.093188726167448 27.31762917933131 23.045040066316663 74-75 23.38007736943907 26.05174081237911 27.10607211936999 23.462109698811826 76-77 23.20565073224648 25.683027079303677 26.894515059408675 24.21680712904117 78-79 23.0302925632966 25.49480156125868 26.971434492763635 24.503471382681084 80-81 22.86582733191717 26.420910833635563 27.104813222112845 23.60844861233442 82-83 23.092532467532468 26.453267477203646 27.30208621166068 23.152113843603207 84-85 22.48780277190104 26.414230819049262 27.769094598678812 23.32887181037088 86-87 22.45527079303675 27.506735285990608 27.389299530256977 22.64869439071567 88-89 23.293727549046697 26.28315833103067 26.582792207792206 23.84032191213042 90-91 22.990639679469467 26.485216910748825 26.88588007736944 23.63826333241227 92-93 22.80153357281017 26.76326333241227 27.178605968499586 23.256597126277978 94-95 22.997547665100857 26.43599751312517 27.04390024868748 23.522554573086488 96-97 22.837800497374968 27.018858800773693 27.310721193699916 22.83261950815142 98-99 21.304227687206414 27.62330754352031 27.490328820116055 23.582135949157227 100-101 22.641965921266376 26.559637783845435 27.242249334669754 23.556146960218435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 1.0 3 1.0 4 0.5 5 1.5 6 1.5 7 10.0 8 17.0 9 17.5 10 21.5 11 21.0 12 25.5 13 29.5 14 29.5 15 34.5 16 36.5 17 45.0 18 50.5 19 55.5 20 71.0 21 94.5 22 122.5 23 163.5 24 210.0 25 303.0 26 440.5 27 561.0 28 642.0 29 692.5 30 802.5 31 934.0 32 1027.5 33 1113.0 34 1212.5 35 1273.0 36 1349.5 37 1382.0 38 1355.5 39 1390.0 40 1401.0 41 1429.0 42 1456.5 43 1502.0 44 1589.0 45 1689.0 46 1783.0 47 1862.5 48 1922.5 49 2112.5 50 2462.0 51 2379.5 52 2160.0 53 2407.0 54 2591.0 55 2452.0 56 1971.0 57 1633.0 58 1593.5 59 1526.5 60 1271.0 61 911.0 62 750.0 63 520.0 64 280.5 65 172.5 66 147.5 67 127.5 68 93.0 69 60.0 70 28.5 71 19.0 72 16.5 73 15.0 74 11.5 75 8.0 76 3.5 77 1.5 78 1.0 79 0.0 80 1.0 81 1.0 82 0.5 83 0.5 84 0.0 85 0.5 86 0.5 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4611080408952749 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 8.634982039237358E-4 24-25 0.0 26-27 0.0 28-29 0.0017269964078474717 30-31 0.0 32-33 0.0 34-35 8.634982039237358E-4 36-37 0.0017269964078474717 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009498480243161094 46-47 0.0768513401492125 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0025904946117712075 58-59 0.018996960486322188 60-61 0.015542967670627246 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0034539928156949434 80-81 0.0017269964078474717 82-83 0.0 84-85 0.0025904946117712075 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06562586349820393 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 57904.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.63083724785852 #Duplication Level Percentage of deduplicated Percentage of total 1 87.68495218922999 60.178916827853 2 7.936587820835431 10.893893340701851 3 1.4997483643683944 3.0878695772312796 4 0.6542526421741319 1.7960762641613706 5 0.43532964267740315 1.4938518927880629 6 0.2591847005535984 1.0672837800497375 7 0.19879214896829392 0.9550290135396519 8 0.12581781580271767 0.6907985631389887 9 0.11575239053850025 0.7149765128488533 >10 0.9914443885254152 13.04054987565626 >50 0.0754906894816306 3.478170765404808 >100 0.02264720684448918 2.6025835866261398 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 347 0.5992677535230727 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 224 0.3868471953578337 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 194 0.33503730312240954 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 139 0.24005250069079856 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 137 0.23659850787510361 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 128 0.22105554020447638 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 114 0.1968775904946118 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 114 0.1968775904946118 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 110 0.1899696048632219 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 97 0.16751865156120477 No Hit GCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGC 94 0.16233766233766234 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 90 0.15542967670627245 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 87 0.15024868748273004 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 86 0.14852169107488256 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 85 0.1467946946670351 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 80 0.13815971262779772 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 78 0.13470571981210278 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 77 0.13297872340425532 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 74 0.1277977341807129 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 71 0.1226167449571705 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 68 0.11743575573362806 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 66 0.11398176291793312 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 62 0.10707377728654324 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 62 0.10707377728654324 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 61 0.10534678087869577 No Hit GCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCGTAGCCCCTCCGATG 60 0.10361978447084831 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 59 0.10189278806300084 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 59 0.10189278806300084 No Hit GGTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTA 59 0.10189278806300084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 0.0 0.0 22-23 0.0 0.0 0.0 0.0 0.0 24-25 0.0 0.0 0.0 0.0 0.0 26-27 0.0 0.0 0.0 0.0 0.0 28-29 0.0 0.0 0.0 0.0 0.0 30-31 0.0 0.0 0.0 8.634982039237358E-4 0.0 32-33 0.0 0.0 0.0 0.00431749101961868 0.0 34-35 0.0 0.0 0.0 0.008634982039237358 0.0 36-37 0.0 0.0 0.0 0.023314451505940866 0.0 38-39 0.0 0.0 0.0 0.043174910196186786 0.0 40-41 0.0 0.0 0.0 0.05958137607073777 0.0 42-43 0.0 0.0 0.0 0.07426084553744128 0.0 44-45 0.0 0.0 0.0 0.09757529704338215 0.0 46-47 0.0 0.0 0.0 0.12434374136501797 0.0 48-49 0.0 0.0 0.0 0.15024868748273001 0.0 50-51 0.0 0.0 0.0 0.18219812102790828 0.0 52-53 0.0 0.0 0.0 0.2115570599613153 0.0 54-55 0.0 0.0 0.0 0.2512779773418071 0.0 56-57 0.0 0.0 0.0 0.29531638574191765 0.0 58-59 0.0 0.0 0.0 0.3402182923459519 0.0 60-61 0.0 0.0 0.0 0.3946186791931473 0.0 62-63 0.0 0.0 0.0 0.4524730588560376 0.0 64-65 0.0 0.0 0.0 0.5060099474993092 0.0 66-67 0.0 0.0 0.0 0.5552293451229622 0.0 68-69 0.0 0.0 0.0 0.6329441834760984 0.0 70-71 0.0 0.0 0.0 0.7020240397899973 0.0 72-73 0.0 0.0 0.0 0.7952818458137607 0.0 74-75 0.0 0.0 0.0 0.8712696877590494 0.0 76-77 0.0 0.0 0.0 0.9498480243161094 0.0 78-79 0.0 0.0 0.0 1.0500138159712629 0.0 80-81 0.0 0.0 0.0 1.1743575573362808 0.0 82-83 0.0 0.0 0.0 1.310790273556231 0.0 84-85 0.0 0.0 0.0 1.4420420005526389 0.0 86-87 0.0 0.0 0.0 1.5447982868195633 0.0 88-89 0.0 0.0 0.0 1.670005526388505 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 35 3.5335688E-8 81.420425 9 ACCGTGC 35 3.5335688E-8 81.420425 8 GGTATCA 150 0.0 73.01521 1 GGACCGG 20 0.0020649314 71.242874 6 ACTATAC 25 0.004999268 56.9943 3 TCTAAAC 25 0.004999268 56.9943 3 GTATCAA 210 0.0 52.01861 2 AACCGTG 55 8.0608334E-7 51.813 7 AAACCGT 55 8.0608334E-7 51.813 6 CGGCTTA 35 4.279582E-6 40.710213 16-17 GTGCGCG 35 4.279582E-6 40.710213 10-11 TTAATCC 50 0.0016039595 37.9962 4 ATACAAA 90 5.466245E-7 37.036697 1 ATCAACG 295 0.0 37.030197 4 TCAACGC 300 0.0 36.413025 5 GTCTAAT 120 3.5743142E-9 35.71396 1 CGTGCGC 40 1.0700034E-5 35.621437 10-11 GCGCGGC 40 1.0700034E-5 35.621437 12-13 TGCGCGG 40 1.0700034E-5 35.621437 12-13 GCGGCTT 40 1.0700034E-5 35.621437 14-15 >>END_MODULE