##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224550_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 270576 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.071303441546924 34.0 31.0 34.0 30.0 34.0 2 32.21673762639702 34.0 31.0 34.0 30.0 34.0 3 32.358335550824904 34.0 31.0 34.0 30.0 34.0 4 35.67960942581752 37.0 35.0 37.0 35.0 37.0 5 35.69454792738454 37.0 35.0 37.0 35.0 37.0 6 35.801804298977 37.0 37.0 37.0 35.0 37.0 7 35.75532937141506 37.0 37.0 37.0 35.0 37.0 8 35.79756149843297 37.0 37.0 37.0 35.0 37.0 9 37.52136183549169 39.0 38.0 39.0 35.0 39.0 10-11 37.583980101708946 39.0 38.5 39.0 35.0 39.0 12-13 37.57857311808881 39.0 38.0 39.0 35.0 39.0 14-15 39.0277371237656 41.0 39.0 41.0 36.0 41.0 16-17 38.84759549997043 41.0 39.0 41.0 35.5 41.0 18-19 38.9433782005795 41.0 39.0 41.0 35.5 41.0 20-21 39.01502165750104 41.0 39.5 41.0 36.0 41.0 22-23 38.96788333037668 41.0 39.0 41.0 35.5 41.0 24-25 38.89733014014547 41.0 39.0 41.0 35.0 41.0 26-27 38.69849136656614 41.0 39.0 41.0 35.0 41.0 28-29 38.60980279108273 41.0 39.0 41.0 35.0 41.0 30-31 38.50886257465555 40.0 39.0 41.0 34.0 41.0 32-33 38.27170554668559 40.0 38.0 41.0 34.0 41.0 34-35 38.248340577139146 40.0 38.0 41.0 34.0 41.0 36-37 38.21608161847318 40.0 38.0 41.0 34.0 41.0 38-39 38.07394040860978 40.0 38.0 41.0 33.5 41.0 40-41 37.94974609721483 40.0 38.0 41.0 33.0 41.0 42-43 37.77044712021761 40.0 37.5 41.0 33.0 41.0 44-45 37.534419165040504 40.0 37.0 41.0 32.0 41.0 46-47 37.30528945656673 40.0 37.0 41.0 31.0 41.0 48-49 37.03410871622021 40.0 36.0 41.0 31.0 41.0 50-51 35.7386834013364 38.5 34.5 40.0 28.5 40.5 52-53 36.08467121991603 39.0 35.0 40.0 29.5 40.5 54-55 36.51729643427355 39.0 35.0 41.0 30.0 41.0 56-57 36.342452767429485 39.0 35.0 41.0 30.0 41.0 58-59 36.189719339483176 38.5 35.0 41.0 30.0 41.0 60-61 35.93453225711076 38.0 35.0 41.0 29.5 41.0 62-63 35.64666674058305 37.0 35.0 40.5 29.0 41.0 64-65 35.3725311927148 37.0 35.0 40.0 29.0 41.0 66-67 35.12782175802732 36.0 35.0 40.0 29.0 41.0 68-69 34.82203706167583 36.0 34.5 39.0 28.0 41.0 70-71 34.52524983738395 35.0 34.0 39.0 28.0 41.0 72-73 34.20307787830406 35.0 34.0 38.5 27.0 41.0 74-75 33.94313612441606 35.0 34.0 37.5 27.0 40.0 76-77 33.60753171012951 35.0 34.0 37.0 26.0 39.0 78-79 33.3860394122169 35.0 34.0 36.5 26.0 39.0 80-81 33.113147507539466 35.0 34.0 36.0 26.0 38.5 82-83 32.86330827567855 35.0 33.0 36.0 26.0 37.0 84-85 32.65265766365088 35.0 33.0 35.0 25.0 37.0 86-87 32.438368517532965 35.0 33.0 35.0 25.0 36.5 88-89 32.29624209094672 35.0 33.0 35.0 25.0 36.0 90-91 32.11789848323576 35.0 33.0 35.0 24.5 36.0 92-93 31.978810020105257 35.0 33.0 35.0 24.0 36.0 94-95 31.83953676601029 35.0 33.0 35.0 24.0 35.0 96-97 31.701819451836084 35.0 32.5 35.0 24.0 35.0 98-99 31.661527629945006 35.0 32.0 35.0 24.0 35.0 100-101 30.451403672166045 34.0 29.5 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 24.0 8 73.0 9 89.0 10 135.0 11 295.0 12 538.0 13 639.0 14 676.0 15 690.0 16 708.0 17 831.0 18 999.0 19 1153.0 20 1520.0 21 1915.0 22 2316.0 23 2072.0 24 1864.0 25 1803.0 26 1842.0 27 1859.0 28 2124.0 29 2467.0 30 2960.0 31 3521.0 32 4750.0 33 6660.0 34 10887.0 35 19526.0 36 40851.0 37 66839.0 38 68737.0 39 19188.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.49267256217865 18.529774309732776 11.658381115606572 24.319172012482003 2 17.484181893442138 20.04316716929809 37.24203181361244 25.23061912364733 3 19.985586251501434 25.32939111152176 29.374110690196805 25.310911946780006 4 13.104266453787474 16.46857075276447 37.91097510496127 32.51618768848679 5 13.374061261900538 38.783558039146115 34.44688368517533 13.395497013778016 6 30.259150848560108 37.218748152090356 18.321284962450477 14.200816036899061 7 26.532656259239552 31.987315948199395 22.20559103542073 19.27443675714032 8 26.283558039146115 33.46342617231387 20.51179705517119 19.74121873336881 9 26.974306664301338 13.388844539057418 20.08345159955059 39.55339719709065 10-11 26.115398261486604 24.12760185677961 28.34102063745491 21.415979244278873 12-13 26.56832091538052 22.82944533144107 27.805681213411386 22.796552539767013 14-15 24.043205711465262 24.822025078242415 24.985811918727713 26.148957291564606 16-17 23.562002544604553 26.956349676006745 26.270268071130577 23.21137970825813 18-19 23.073226362747473 26.117285650649418 27.48100351003011 23.328484476572996 20-21 24.445685087754974 24.563998092202805 27.581904025969706 23.408412794072518 22-23 24.323154844567394 25.79195644817403 26.492794680286476 23.392094026972103 24-25 23.543186442933422 25.57863161454993 27.021167668710184 23.857014273806463 26-27 23.382894270001774 26.35008278635208 27.22839424043522 23.03862870321093 28-29 23.043248477322454 26.426031872745547 27.473981432203892 23.056738217728107 30-31 23.229887351428065 25.399518065164685 27.708850748033825 23.661743835373425 32-33 23.40968895984862 25.707934184850096 27.631792915853588 23.250583939447697 34-35 23.921190349476674 25.52628466678493 27.15152119921944 23.401003784518952 36-37 23.22834281827541 25.424511998343906 27.7443335249421 23.60281165843858 38-39 23.20977798475054 25.874367531886744 26.99627079429494 23.91958368906777 40-41 23.78996117305066 25.49069613153484 27.37031965242396 23.349023042990545 42-43 23.60140667821035 25.767972014273756 27.31066114984671 23.319960157669186 44-45 23.65301664393511 25.695160580892924 26.849110512328632 23.80271226284333 46-47 23.750997871208092 25.55178581988055 26.603431198628115 24.093785110283246 48-49 23.422069954467506 25.816036899059785 26.954534031104018 23.807359115368694 50-51 23.331891963810538 26.1287032109278 26.441923895689197 24.09748092957247 52-53 23.960735615871325 26.28244929335935 25.747849033173676 24.00896605759565 54-55 23.739171249482585 25.722163089113593 26.25121962036544 24.287446041038375 56-57 23.78998876470936 26.342136774880252 25.984381467683754 23.883492992726627 58-59 24.09042016433981 26.193644492250602 26.35129390804215 23.364641435367435 60-61 23.99078109347912 26.339125645489798 26.112903881625392 23.55718937940569 62-63 23.738685367733638 25.92554939621407 26.61852152391022 23.71724371214208 64-65 24.346279561622765 25.611383905461967 25.981505036013786 24.060831496901482 66-67 23.55220989675936 26.061885241356876 25.63384134283063 24.752063519053127 68-69 23.53737951629117 26.201695641889895 26.770297439536396 23.490627402282538 70-71 24.019129560641 25.63143072556324 26.401824256401156 23.947615457394594 72-73 23.798858731003488 25.674302229318197 26.5940068594406 23.932832180237714 74-75 23.777977352019395 25.699803382413815 26.587723966648923 23.934495298917863 76-77 23.732518774761992 25.54975311927148 25.991773106262194 24.72595499970433 78-79 23.903906790029904 25.126326567576857 26.4178701728835 24.55189646950974 80-81 23.666596404811827 26.212664144635877 25.97229464123927 24.148444809313023 82-83 23.48962888050333 26.38659066663955 26.258835188037207 23.864945264819912 84-85 23.433846404099143 25.65236759946099 26.822072825610775 24.09171317082909 86-87 23.443009420618118 26.50531123170653 26.253108619079757 23.798570728595596 88-89 23.72368153502043 25.8722295136514 26.050243081871454 24.353845869456716 90-91 23.447201525634203 25.87794187215422 26.196336703920526 24.478519898291054 92-93 23.328645637948526 25.869425815834557 26.630421726266924 24.171506819949997 94-95 23.746008515167645 25.55714475784992 26.541526225533673 24.15532050144876 96-97 23.705539293950682 26.21370705457986 26.31404854828218 23.766705103187274 98-99 22.674758106839533 26.809301706741962 26.38520330852188 24.13073687789662 100-101 23.411068260559293 25.9803142182075 26.16093977052975 24.44767775070346 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 1.0 3 2.5 4 2.5 5 2.0 6 6.0 7 12.0 8 15.0 9 19.5 10 21.5 11 27.0 12 30.0 13 27.5 14 42.5 15 50.5 16 51.0 17 62.5 18 77.0 19 87.5 20 112.5 21 150.0 22 174.5 23 206.5 24 287.5 25 413.0 26 596.5 27 899.5 28 1222.0 29 1620.5 30 2166.5 31 2815.0 32 3565.0 33 4202.5 34 4735.5 35 5184.0 36 5686.0 37 6149.5 38 6412.0 39 6639.5 40 6738.0 41 6832.5 42 6991.0 43 7273.0 44 7810.5 45 8501.0 46 9350.5 47 9746.0 48 10118.5 49 10982.5 50 12094.0 51 12246.0 52 11876.0 53 12206.5 54 12376.5 55 12013.0 56 10278.0 57 8693.0 58 8117.5 59 7474.0 60 6272.0 61 4881.5 62 4010.0 63 2939.0 64 1834.0 65 1201.5 66 919.5 67 817.5 68 667.5 69 457.0 70 279.0 71 196.5 72 173.5 73 132.0 74 94.0 75 58.5 76 35.5 77 27.5 78 15.0 79 8.5 80 9.0 81 9.5 82 5.0 83 4.5 84 5.5 85 3.5 86 1.5 87 0.5 88 3.0 89 3.0 90 1.0 91 2.0 92 2.5 93 2.0 94 2.5 95 2.0 96 2.0 97 2.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15781148364969547 2 0.0 3 3.6958192892200346E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03788214771450535 16-17 0.07391638578440068 18-19 0.024207616344391225 20-21 0.03954526639465437 22-23 0.06855744781503163 24-25 0.016815977765951156 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.021990124770859206 38-39 0.0033262373602980307 40-41 0.006098101827213057 42-43 0.003511028324759033 44-45 0.009978712080894092 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.014413695227958134 60-61 0.016631186801490155 62-63 0.027533853704689255 64-65 0.045828159186328425 66-67 0.015892022943646146 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017370350659334163 80-81 0.05876352669859855 82-83 0.050817515226775474 84-85 0.029751345278221278 86-87 0.05857873573413754 88-89 0.03363195553190231 90-91 0.0 92-93 0.003511028324759033 94-95 0.0 96-97 0.0 98-99 7.391638578440069E-4 100-101 0.04693690497309444 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 270576.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.25183897164571 #Duplication Level Percentage of deduplicated Percentage of total 1 85.8075763803433 57.70717309278039 2 9.722881879715576 13.077633730299276 3 2.176637934456207 4.391487116028731 4 0.7255340741500786 1.951740028927326 5 0.3715042154066003 1.2492170835906133 6 0.20102485375196663 0.8111574656295535 7 0.12377898408792806 0.5827055014168665 8 0.08168002930497215 0.4394505742413832 9 0.06157321457062195 0.3726820720143051 >10 0.5743994204830809 7.980856454232958 >50 0.09858052145804619 4.618830029288676 >100 0.05427466911735127 6.584654147874729 >500 5.538231542586865E-4 0.2324127036751983 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 624 0.23061912364733014 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 496 0.1833126367453137 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 475 0.17555141623795162 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 419 0.15485482821831945 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 416 0.15374608243155344 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 343 0.1267666016202472 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 342 0.12639701969132516 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 334 0.12344036425994914 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 321 0.1186357991839631 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 318 0.1175270533971971 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 315 0.11641830761043108 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 314 0.11604872568150909 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 299 0.11050499674767902 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 282 0.10422210395600498 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 279 0.10311335816923896 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 278 0.10274377624031694 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 3.6958192892200346E-4 0.0 22-23 0.0 0.0 0.0 9.239548223050086E-4 0.0 24-25 0.0 0.0 0.0 0.0011087457867660104 3.6958192892200346E-4 26-27 0.0 0.0 0.0 0.0014783277156880138 3.6958192892200346E-4 28-29 0.0 0.0 0.0 0.003141446395837029 3.6958192892200346E-4 30-31 0.0 0.0 0.0 0.006282892791674059 3.6958192892200346E-4 32-33 0.0 0.0 0.0 0.013489740405653126 3.6958192892200346E-4 34-35 0.0 0.0 0.0 0.02697948081130625 3.6958192892200346E-4 36-37 0.0 0.0 0.0 0.04434983147064041 3.6958192892200346E-4 38-39 0.0 0.0 0.0 0.06948140263733665 3.6958192892200346E-4 40-41 0.0 0.0 0.0 0.09368901898172786 3.6958192892200346E-4 42-43 0.0 0.0 0.0 0.1191901720773461 3.6958192892200346E-4 44-45 0.0 0.0 0.0 0.1517133818224824 3.6958192892200346E-4 46-47 0.0 0.0 0.0 0.19144343918159779 3.6958192892200346E-4 48-49 0.0 0.0 0.0 0.23098870557625215 3.6958192892200346E-4 50-51 0.0 0.0 0.0 0.26517503400153747 3.6958192892200346E-4 52-53 0.0 0.0 0.0 0.3032419726805038 3.6958192892200346E-4 54-55 0.0 0.0 0.0 0.3490701318668322 3.6958192892200346E-4 56-57 0.0 0.0 0.0 0.3980397374489977 3.6958192892200346E-4 58-59 0.0 0.0 0.0 0.45015078942700015 3.6958192892200346E-4 60-61 0.0 0.0 0.0 0.5063272426231447 3.6958192892200346E-4 62-63 0.0 0.0 0.0 0.5641668144994383 3.6958192892200346E-4 64-65 0.0 0.0 0.0 0.6275501153095617 3.6958192892200346E-4 66-67 0.0 0.0 0.0 0.6992490095204305 3.6958192892200346E-4 68-69 0.0 0.0 0.0 0.7848072260658743 3.6958192892200346E-4 70-71 0.0 0.0 0.0 0.8681479510377861 3.6958192892200346E-4 72-73 0.0 0.0 0.0 0.969413399562415 3.6958192892200346E-4 74-75 0.0 0.0 0.0 1.073450712553959 3.6958192892200346E-4 76-77 0.0 0.0 0.0 1.176748861687659 3.6958192892200346E-4 78-79 0.0 0.0 0.0 1.2983413163029982 3.6958192892200346E-4 80-81 0.0 0.0 0.0 1.4278797823901601 3.6958192892200346E-4 82-83 0.0 0.0 0.0 1.5675817515226775 3.6958192892200346E-4 84-85 0.0 0.0 0.0 1.715784105020401 3.6958192892200346E-4 86-87 0.0 0.0 0.0 1.8748891254213236 3.6958192892200346E-4 88-89 0.0 0.0 0.0 2.056169061557566 3.6958192892200346E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 375 0.0 63.37009 1 AAACCGT 110 0.0 51.790764 6 CCGTGCG 115 1.8189894E-12 45.444336 9 AACCGTG 115 1.8189894E-12 45.41074 7 ACCGTGC 130 0.0 43.831055 8 GTATCAA 595 0.0 39.096947 2 CTACACC 55 0.0025828497 34.527176 4 TCCGCTA 185 0.0 33.366882 8 CCGCTAC 190 0.0 32.506832 9 GTATAAA 105 1.8860046E-6 31.685045 1 GCACGTA 30 0.00394863 31.667467 44-45 TGGTATC 135 1.1961674E-8 31.649912 2 ATCAACG 790 0.0 31.24928 4 TCAACGC 815 0.0 30.290712 5 ATCCGCT 205 1.8189894E-12 30.106012 7 TCAATAC 85 6.414244E-4 27.926394 3 CAGTCCG 70 0.008371833 27.148561 9 TACTCTA 70 0.008402097 27.128494 5 CTTAGAC 70 0.008402097 27.128494 3 ACGCAGA 915 0.0 26.466291 8 >>END_MODULE