##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224550_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 270576 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.11311054934658 34.0 33.0 34.0 31.0 34.0 2 33.24062740228254 34.0 33.0 34.0 31.0 34.0 3 33.35857208325942 34.0 34.0 34.0 31.0 34.0 4 36.59333791614925 37.0 37.0 37.0 35.0 37.0 5 36.6319592277216 37.0 37.0 37.0 35.0 37.0 6 36.673825468629886 37.0 37.0 37.0 35.0 37.0 7 36.64925196617586 37.0 37.0 37.0 35.0 37.0 8 36.64017133818225 37.0 37.0 37.0 35.0 37.0 9 38.484337117852284 39.0 39.0 39.0 37.0 39.0 10-11 38.49953802258885 39.0 39.0 39.0 37.0 39.0 12-13 38.48460321684111 39.0 39.0 39.0 37.0 39.0 14-15 40.06108450121223 41.0 40.0 41.0 38.0 41.0 16-17 40.058672979126015 41.0 40.0 41.0 38.0 41.0 18-19 40.059134956537164 41.0 40.0 41.0 38.0 41.0 20-21 40.06293610667613 41.0 40.0 41.0 38.0 41.0 22-23 39.98026432499557 41.0 40.0 41.0 38.0 41.0 24-25 39.940889066288214 41.0 40.0 41.0 38.0 41.0 26-27 39.85959767311218 41.0 40.0 41.0 38.0 41.0 28-29 39.8159463514872 41.0 40.0 41.0 38.0 41.0 30-31 39.71724580154929 41.0 40.0 41.0 37.0 41.0 32-33 39.633579844479925 41.0 40.0 41.0 36.5 41.0 34-35 39.530241041334044 41.0 40.0 41.0 36.0 41.0 36-37 39.392041422742594 41.0 39.5 41.0 36.0 41.0 38-39 39.25374016912069 41.0 39.0 41.0 35.0 41.0 40-41 39.08471372183786 41.0 39.0 41.0 35.0 41.0 42-43 38.958765744190174 41.0 39.0 41.0 35.0 41.0 44-45 38.665376825734725 40.5 38.0 41.0 35.0 41.0 46-47 38.38222347880078 40.0 38.0 41.0 35.0 41.0 48-49 38.222394077819175 40.0 37.5 41.0 35.0 41.0 50-51 38.040665099639284 40.0 37.0 41.0 34.5 41.0 52-53 37.77510939625096 40.0 36.5 41.0 34.0 41.0 54-55 37.56475075394714 40.0 36.0 41.0 34.0 41.0 56-57 37.333366595706934 39.0 35.0 41.0 33.5 41.0 58-59 37.047879338891846 39.0 35.0 41.0 33.0 41.0 60-61 36.793545990775236 38.5 35.0 41.0 33.0 41.0 62-63 36.56282338418781 37.5 35.0 41.0 33.0 41.0 64-65 36.28637240553486 37.0 35.0 40.0 32.5 41.0 66-67 36.00899931996925 36.5 35.0 40.0 32.0 41.0 68-69 35.74293174560937 36.0 35.0 39.5 32.0 41.0 70-71 35.45189336822187 35.5 35.0 39.0 31.5 41.0 72-73 35.15462014369345 35.0 35.0 39.0 31.0 41.0 74-75 34.844444814026375 35.0 35.0 37.5 31.0 40.0 76-77 33.03738136420082 34.5 32.0 35.5 28.0 38.5 78-79 34.351413281296196 35.0 34.5 37.0 31.0 39.0 80-81 34.30190223818816 35.0 35.0 36.0 31.0 39.0 82-83 34.10681287327775 35.0 35.0 36.0 31.0 37.0 84-85 33.91423296966472 35.0 35.0 36.0 31.0 37.0 86-87 33.731389701969135 35.0 34.5 35.0 31.0 37.0 88-89 33.582485142806455 35.0 34.0 35.0 31.0 36.0 90-91 33.450712553958965 35.0 34.0 35.0 31.0 36.0 92-93 33.34729059487907 35.0 34.0 35.0 30.5 36.0 94-95 33.239507569037904 35.0 34.0 35.0 30.0 36.0 96-97 33.18803219797765 35.0 34.0 35.0 30.0 35.0 98-99 33.16209309029625 35.0 34.0 35.0 30.0 35.0 100-101 32.30488106853527 34.5 32.5 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 4.0 15 15.0 16 49.0 17 145.0 18 288.0 19 446.0 20 688.0 21 1018.0 22 1459.0 23 1313.0 24 1017.0 25 988.0 26 1126.0 27 1367.0 28 1784.0 29 2128.0 30 2281.0 31 2466.0 32 3074.0 33 4252.0 34 6894.0 35 14320.0 36 38421.0 37 75690.0 38 83534.0 39 25782.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.82839610271421 18.33381003146208 11.561105890131605 24.27668797569211 2 17.19886464431435 20.375790905327893 37.55950269055644 24.865841759801313 3 19.748240790018333 25.835994323221573 29.592425048784815 24.823339837975283 4 13.261708355508251 16.706581514990244 38.200357755307195 31.83135237419431 5 13.318623972562238 38.14639879368458 35.09697829814913 13.437998935604046 6 30.309413990893503 36.701703033528474 18.598101827213057 14.39078114836497 7 26.40773756726391 31.75780557033883 22.510496126781383 19.323960735615874 8 26.195597540062682 33.2690260777009 20.500340015374608 20.035036366861807 9 26.973567500443497 13.564765537224291 20.167346697415883 39.29432026491633 10-11 26.255839394476965 24.032249719117736 28.382968186387558 21.328942700017738 12-13 26.99260096978298 23.006844657323636 27.617379220625626 22.383175152267754 14-15 24.028553899828513 24.99094524274141 25.28734994973686 25.69315090769322 16-17 23.30639081071492 27.117334870794156 26.40736798533499 23.168906333155935 18-19 22.95029862219857 26.133138194074863 28.007472946602803 22.909090237123767 20-21 24.327216079919133 24.72932493389042 27.96615337422179 22.977305611968653 22-23 24.401872319351302 25.589165236063398 26.962913958684055 23.046048485901245 24-25 24.032102182955832 25.287583595584934 27.334347229126283 23.345966992332954 26-27 23.510280111320135 26.30122962179982 27.283596542127576 22.90489372475247 28-29 23.17068663468433 26.42793255619701 27.790631491022523 22.61074931809614 30-31 23.201643915608884 25.32195503255123 27.90923723128836 23.56716382055153 32-33 23.343392140086593 25.763788665270877 27.97481664082668 22.918002553815846 34-35 24.166886883631197 25.52884411041278 27.147669796519523 23.156599209436497 36-37 23.27121196721766 25.467480989383624 27.636585388389435 23.62472165500929 38-39 23.484529300455325 25.618864939979897 27.16223907515818 23.7343666844066 40-41 23.632546862988587 25.690933416119687 27.528125184790962 23.148394536100763 42-43 23.560293595884335 25.855766956418897 27.614237774229792 22.969701673466975 44-45 23.883711174069166 25.743622724777815 27.067035544196 23.30563055695702 46-47 23.673322939264978 25.646346447984346 26.784515427423695 23.89581518532698 48-49 23.337096944083584 25.54407582412912 27.32196612011154 23.796861111675753 50-51 23.75838950978653 25.750990479569513 26.72114304298977 23.769476967654192 52-53 24.083621607237895 26.17471616107859 26.09562562828928 23.64603660339424 54-55 23.852632901661643 25.70294482880965 26.48886080066229 23.955561468866417 56-57 24.093170410780683 26.086827962950643 26.064651571936515 23.75535005433216 58-59 24.29150321480994 26.02960804830164 26.36329016109174 23.315598575796677 60-61 24.12193873118506 26.272613508862406 26.132685635488812 23.472762124463717 62-63 23.89790668795459 25.686313642008162 26.754405416592753 23.661374253444503 64-65 23.94151735556738 25.69518360830229 26.417531488380348 23.945767547749984 66-67 23.560478386848796 25.79145970078647 26.259720004730646 24.388341907634086 68-69 23.780379634557388 26.014132812961975 26.59345248654722 23.612035065933416 70-71 24.300196617586188 25.584493820590147 26.51306841700668 23.602241144816983 72-73 23.83951274318491 25.66580184495299 26.670325527762994 23.82435988409911 74-75 23.875546981254807 25.68742238779493 26.691022115782626 23.746008515167645 76-77 23.639982186118107 25.27630920020475 26.41628676654021 24.667421847136936 78-79 24.03066966537983 25.18992979389083 26.34290666967277 24.436493871056566 80-81 23.398900075398057 26.03432090004583 26.416855161810144 24.14992386274597 82-83 23.42529797653146 26.02457728910653 26.768733253256954 23.781391481105054 84-85 23.54077118390367 25.564639225933306 26.928606539503498 23.96598305065953 86-87 23.235800662290817 26.584952102182015 26.523231920052037 23.656015315475134 88-89 23.763009283898054 25.730293891549877 25.9851206315416 24.521576193010468 90-91 23.72549671811247 25.908801963219208 26.12315948199397 24.242541836674352 92-93 23.65527615161729 26.057928271539232 26.551504937614574 23.735290639228904 94-95 23.665624445627106 25.801438412867366 26.31663562178464 24.216301519720894 96-97 23.720322571107562 26.2395777896044 26.35987670746851 23.680222931819525 98-99 22.326444326178226 26.96451274318491 26.603061616699193 24.105981313937676 100-101 23.30507142526929 26.135638666728305 26.269150755859645 24.29013915214276 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 2.0 3 4.0 4 6.0 5 5.5 6 5.0 7 9.5 8 17.5 9 20.0 10 23.5 11 29.5 12 34.5 13 43.5 14 49.0 15 60.5 16 82.5 17 84.5 18 88.0 19 103.5 20 113.5 21 142.0 22 184.0 23 245.0 24 337.5 25 462.5 26 662.0 27 946.0 28 1230.5 29 1644.0 30 2244.0 31 2928.0 32 3564.5 33 4159.0 34 4901.5 35 5428.0 36 5751.5 37 6048.5 38 6343.0 39 6624.0 40 6720.0 41 6786.5 42 6922.5 43 7345.5 44 7918.0 45 8492.0 46 9156.5 47 9904.0 48 10371.0 49 11142.0 50 12451.0 51 12352.0 52 11336.0 53 11661.0 54 12342.0 55 11948.0 56 10272.0 57 8690.0 58 8178.5 59 7750.5 60 6408.0 61 4881.0 62 4013.5 63 2814.5 64 1637.0 65 1092.0 66 849.5 67 705.5 68 582.0 69 377.5 70 225.0 71 161.0 72 129.0 73 101.0 74 69.0 75 53.5 76 40.0 77 27.5 78 18.5 79 7.5 80 5.0 81 5.0 82 2.5 83 1.0 84 0.0 85 0.0 86 0.5 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.5037401691206906 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 9.239548223050085E-4 22-23 9.239548223050085E-4 24-25 9.239548223050085E-4 26-27 0.001847909644610017 28-29 0.003695819289220034 30-31 9.239548223050085E-4 32-33 1.8479096446100173E-4 34-35 0.003511028324759033 36-37 0.001293536751227012 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009424339187511089 46-47 0.08481905268759979 48-49 9.239548223050085E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.006652474720596061 58-59 0.04028443025249838 60-61 0.029381763349299275 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 1.8479096446100173E-4 78-79 0.005728519898291053 80-81 0.0044349831470640415 82-83 3.6958192892200346E-4 84-85 0.001847909644610017 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06966619360179764 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 270576.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.66231106626206 #Duplication Level Percentage of deduplicated Percentage of total 1 84.88196684713459 55.73546111032696 2 10.326084471334433 13.560691413065197 3 2.3311465191840157 4.592054036510847 4 0.8033262445489995 2.1099303102907405 5 0.3849323377700966 1.263777345106177 6 0.22095913271633721 0.8705212383210971 7 0.1253572274925292 0.5761871686213043 8 0.09612630366804853 0.5049500202481096 9 0.07904341762159088 0.46711561280484243 >10 0.5920645357884248 8.305345001111396 >50 0.1014848698346571 4.810843640854044 >100 0.05638048324147617 6.78293783668548 >500 0.0011276096648295234 0.4201852660538161 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 603 0.22285790313996806 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 532 0.19661758618650582 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 446 0.16483354029921352 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 443 0.1637247945124475 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 416 0.15374608243155344 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 409 0.1511590089290994 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 407 0.1504198450712554 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 375 0.1385932233457513 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 372 0.1374844775589853 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 360 0.13304949441192124 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 338 0.12491869197563715 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 338 0.12491869197563715 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 323 0.11937496304180711 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 315 0.11641830761043108 No Hit GGTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTC 286 0.10570043167169299 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 286 0.10570043167169299 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 284 0.10496126781384897 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 276 0.10200461238247295 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 271 0.10015670273786294 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 3.6958192892200346E-4 0.0 22-23 0.0 0.0 0.0 9.239548223050086E-4 0.0 24-25 0.0 0.0 0.0 0.0011087457867660104 0.0 26-27 0.0 0.0 0.0 0.0014783277156880138 0.0 28-29 0.0 0.0 0.0 0.003141446395837029 0.0 30-31 0.0 0.0 0.0 0.006098101827213057 0.0 32-33 0.0 0.0 0.0 0.013120158476731121 0.0 34-35 0.0 0.0 0.0 0.02660989888238425 0.0 36-37 0.0 0.0 0.0 0.0434258766483354 0.0 38-39 0.0 0.0 0.0 0.06892702974395364 0.0 40-41 0.0 0.0 0.0 0.09313464608834486 0.0 42-43 0.0 0.0 0.0 0.1188205901484241 0.0 44-45 0.0 0.0 0.0 0.1518981727869434 0.0 46-47 0.0 0.0 0.0 0.1919978120749808 0.0 48-49 0.0 0.0 0.0 0.23135828750517415 0.0 50-51 0.0 0.0 0.0 0.2662837797883035 0.0 52-53 0.0 0.0 0.0 0.3065682100408018 0.0 54-55 0.0 0.0 0.0 0.35184199633374724 0.0 56-57 0.0 0.0 0.0 0.4006268109514517 0.0 58-59 0.0 0.0 0.0 0.4536618177517592 0.0 60-61 0.0 0.0 0.0 0.5109470167346697 0.0 62-63 0.0 0.0 0.0 0.5693409615043463 0.0 64-65 0.0 0.0 0.0 0.6325394713500089 0.0 66-67 0.0 0.0 0.0 0.7055319023121045 0.0 68-69 0.0 0.0 0.0 0.7912749098220093 0.0 70-71 0.0 0.0 0.0 0.8772027082963751 0.0 72-73 0.0 0.0 0.0 0.9810552303234581 0.0 74-75 0.0 0.0 0.0 1.089527526462066 0.0 76-77 0.0 0.0 0.0 1.19541274909822 0.0 78-79 0.0 0.0 0.0 1.3197770681804744 0.0 80-81 0.0 0.0 0.0 1.4520873987345515 0.0 82-83 0.0 0.0 0.0 1.5936372775116787 0.0 84-85 0.0 0.0 0.0 1.7446114954763172 0.0 86-87 0.0 0.0 0.0 1.9087058719176868 0.0 88-89 0.0 0.0 0.0 2.093496836378688 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 410 0.0 68.69938 1 AACCGTG 85 1.8189894E-12 55.86398 7 CCGTGCG 95 0.0 54.981922 9 AAACCGT 90 3.6379788E-12 52.76043 6 ACCGTGC 120 1.8189894E-12 43.52735 8 TGGTATC 180 0.0 39.57032 2 GTATCAA 725 0.0 38.642467 2 GAGTCGC 55 0.0025803123 34.534096 9 GTAGGGT 55 0.0025803123 34.534096 3 CGTAGTG 55 0.0025803123 34.534096 7 CCTATTG 55 0.0025803123 34.534096 3 TGCGCGG 90 2.1100277E-10 29.018236 12-13 GTGCGCG 90 2.1100277E-10 29.018236 10-11 GTCTAAT 265 0.0 28.824299 1 ATCAACG 975 0.0 28.73414 4 CGTGCGC 100 2.3646862E-11 28.490631 10-11 GAATATA 85 6.2084454E-4 28.082499 1 TCTAATG 255 0.0 27.93199 2 TCAACGC 1025 0.0 27.795736 5 CCGTAGT 70 0.008393885 27.133932 6 >>END_MODULE