##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224547_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556130 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.146553863305343 34.0 31.0 34.0 28.0 34.0 2 31.313766565371406 34.0 31.0 34.0 28.0 34.0 3 31.456598277381186 34.0 31.0 34.0 28.0 34.0 4 34.556375307931596 37.0 35.0 37.0 32.0 37.0 5 34.55652455361157 37.0 35.0 37.0 32.0 37.0 6 34.66159710858972 37.0 37.0 37.0 32.0 37.0 7 34.639370291118986 37.0 37.0 37.0 32.0 37.0 8 34.66469530505457 37.0 37.0 37.0 32.0 37.0 9 36.31653390394332 39.0 38.0 39.0 32.0 39.0 10-11 36.39528437595526 39.0 38.0 39.0 32.0 39.0 12-13 36.41078614712387 39.0 38.0 39.0 32.0 39.0 14-15 37.84507129627965 41.0 39.0 41.0 32.0 41.0 16-17 37.69731537590132 41.0 39.0 41.0 31.5 41.0 18-19 37.77418679085825 41.0 39.0 41.0 32.0 41.0 20-21 37.831367665833525 41.0 39.0 41.0 32.0 41.0 22-23 37.79577796558358 41.0 39.0 41.0 32.0 41.0 24-25 37.744252243180554 41.0 39.0 41.0 32.0 41.0 26-27 37.58992142125042 41.0 39.0 41.0 31.0 41.0 28-29 37.519339003470414 41.0 39.0 41.0 31.0 41.0 30-31 37.464696204124934 41.0 39.0 41.0 30.5 41.0 32-33 37.29367144372719 41.0 38.5 41.0 30.0 41.0 34-35 37.304792045025444 41.0 38.0 41.0 30.0 41.0 36-37 37.322503731142 41.0 38.0 41.0 30.0 41.0 38-39 37.23963102152374 41.0 38.0 41.0 30.0 41.0 40-41 37.17286425835686 40.0 38.0 41.0 30.0 41.0 42-43 37.06948735008002 40.0 38.0 41.0 29.0 41.0 44-45 36.94849945156708 40.0 38.0 41.0 28.5 41.0 46-47 36.84687752863539 40.0 38.0 41.0 28.0 41.0 48-49 36.69536798949886 40.0 37.5 41.0 27.5 41.0 50-51 35.53675129915668 39.0 35.5 40.0 25.5 40.5 52-53 35.881545681765054 39.5 36.5 40.5 26.0 40.5 54-55 36.37996781328107 40.0 36.5 41.0 27.0 41.0 56-57 36.29389441317677 40.0 36.0 41.0 26.0 41.0 58-59 36.19727311959434 40.0 35.5 41.0 26.0 41.0 60-61 35.9983807742794 40.0 35.0 41.0 26.0 41.0 62-63 35.75070127488178 39.0 35.0 41.0 26.0 41.0 64-65 35.50790552568644 39.0 35.0 41.0 25.0 41.0 66-67 35.26031323611386 38.5 35.0 41.0 25.0 41.0 68-69 34.9312849513603 37.5 35.0 40.0 24.5 41.0 70-71 34.59414165752612 37.0 35.0 40.0 24.0 41.0 72-73 34.21882473522378 36.5 35.0 39.0 23.5 41.0 74-75 33.854268786075195 36.0 34.5 39.0 23.0 40.5 76-77 33.430471292683364 35.5 34.0 38.0 22.0 39.0 78-79 33.10026073040476 35.0 34.0 37.0 22.0 39.0 80-81 32.71732418679086 35.0 34.0 37.0 21.0 39.0 82-83 32.406433747505076 35.0 34.0 36.0 20.0 37.0 84-85 32.14391059644328 35.0 34.0 36.0 20.0 37.0 86-87 31.8735151852984 35.0 33.5 35.5 20.0 36.5 88-89 31.686372790534588 35.0 33.0 35.0 19.5 36.0 90-91 31.505679427471993 35.0 33.0 35.0 19.0 36.0 92-93 31.334386744106595 35.0 33.0 35.0 18.0 36.0 94-95 31.19359502274648 35.0 33.0 35.0 18.0 35.0 96-97 31.03170841350044 35.0 32.5 35.0 17.0 35.0 98-99 30.94892021649614 35.0 32.0 35.0 17.0 35.0 100-101 29.792464891302394 34.0 29.5 35.0 13.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 24.0 7 2046.0 8 9984.0 9 6234.0 10 3815.0 11 3277.0 12 2820.0 13 2580.0 14 2071.0 15 1871.0 16 1599.0 17 1592.0 18 1555.0 19 1552.0 20 1631.0 21 1903.0 22 2255.0 23 2254.0 24 2477.0 25 2593.0 26 2755.0 27 3023.0 28 3056.0 29 3707.0 30 4239.0 31 5352.0 32 6703.0 33 9533.0 34 15116.0 35 25621.0 36 54217.0 37 115882.0 38 206158.0 39 46624.0 40 11.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.82289021671403 18.6607454789715 13.113954049566537 26.402410254747938 2 16.14496610504738 20.136838508981715 37.37111826371532 26.347077122255584 3 20.967759336845702 24.12565407368781 27.08809091399493 27.81849567547156 4 14.367683814935356 17.471274701958176 36.221387085753335 31.939654397353134 5 15.451423228381852 36.38843435887292 32.628342294067934 15.531800118677289 6 29.95900239152716 36.02700807365184 19.244960710625215 14.769028824195782 7 28.071494075126317 30.298491359933827 21.52626184525201 20.103752719687844 8 25.836045528923098 34.06613561577329 20.861669034218618 19.236149821084997 9 26.171218959595777 16.872853469512524 20.197076223185224 36.758851347706475 10-11 25.454749788718466 25.776886699153074 27.324186790858253 21.444176721270207 12-13 26.14766331613112 23.306780788664522 27.454372179166743 23.091183716037616 14-15 23.290143976514777 24.907811139652182 25.00836445269497 26.793680431138068 16-17 23.125349206934747 27.77892243174888 26.006728166075394 23.089000195240978 18-19 23.202321662071185 27.263881319685385 26.801185652027677 22.732611366215753 20-21 24.136237635161024 26.08250241495491 26.46286905637773 23.318390893506336 22-23 24.061370655693313 26.39488781790325 26.133628898978984 23.410112627424446 24-25 23.540340108465664 26.638472668217545 26.3581812802761 23.46300594304069 26-27 23.280797655224497 27.50184309424056 26.483376189020554 22.733983061514394 28-29 23.149083847301892 27.343067268444425 26.728193048387965 22.779655835865714 30-31 23.402262061028896 26.930933414849044 26.736824123855936 22.929980400266125 32-33 23.0834517109309 26.92266196752558 26.745724920432274 23.24816140111125 34-35 23.43543775735889 26.984787729487707 26.60115440634384 22.978620106809558 36-37 23.047642171144922 26.64715298010863 27.14281860364735 23.1623862450991 38-39 23.100694481907865 26.706533740455818 26.857226603943907 23.335545173692406 40-41 23.205578797548306 26.36657972273247 27.255979306084903 23.17186217363432 42-43 23.293634880931616 26.693687748265177 27.118514535819415 22.89416283498379 44-45 23.010522189032535 26.317071986447576 27.27253926263751 23.399866561882376 46-47 23.0130545016453 26.191448042723824 27.190944563321523 23.604552892309353 48-49 22.639041231366765 26.619135813568768 27.32032078830489 23.42150216675957 50-51 22.557405642565588 26.675957060399547 27.150486397065432 23.616150899969433 52-53 22.87936273892795 26.643230899250174 26.83293474547318 23.644471616348696 54-55 22.856796072860664 26.377735421574094 27.127739916925897 23.637728588639348 56-57 22.670328879938147 26.562943915990868 27.05608400913456 23.710643194936434 58-59 23.00588451107482 26.27509729585854 27.13969958779647 23.579318605270164 60-61 22.667239787022243 26.459096382237707 26.947927279659652 23.9257365510804 62-63 22.65398973506688 26.084477503752446 27.221768061434915 24.03976469974576 64-65 23.237982842848442 25.756056139883764 26.878547983625417 24.127413033642373 66-67 22.702494663028954 26.2422508259491 26.682337368509085 24.372917142512865 68-69 22.719508028698325 26.362631039505153 27.32778307230324 23.590077859493285 70-71 23.027709348533616 26.299426393109528 26.981011633970475 23.691852624386385 72-73 22.994623559239745 26.303652023807384 27.141405786416843 23.560318630536024 74-75 23.03723949436283 26.150899969431606 27.11362451225433 23.698236023951235 76-77 23.146206822145903 26.08670634563861 26.477082696491827 24.29000413572366 78-79 23.314060139558304 25.545374433493993 27.042928566290197 24.097636860657506 80-81 23.085635224923582 25.91105609640687 26.914994485535548 24.088314193133996 82-83 23.120536115858595 25.928038139785915 27.131960061167582 23.81946568318791 84-85 23.295188827892854 25.542309103598125 27.197386124081763 23.965115944427257 86-87 23.215460001061516 26.03351693973734 26.76380443983854 23.987218619362604 88-89 23.384876618990702 25.63340861117332 26.882912829700302 24.09880194013568 90-91 23.555823278729793 25.481811806591985 26.891464225990326 24.070900688687896 92-93 23.435190413338464 25.587657748702586 27.01130719682938 23.965844641129568 94-95 23.73428874543722 25.362145541510078 27.131246291334758 23.772319421717945 96-97 23.908348767374534 25.46994407782353 26.85882797187708 23.762879182924856 98-99 23.409512044471896 25.361945528580275 26.98567681993216 24.24286560701567 100-101 24.030355800055407 25.035889428179768 26.589928652896162 24.343826118868662 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 0.0 3 0.0 4 0.5 5 1.0 6 2.0 7 1.5 8 0.5 9 1.0 10 3.5 11 3.5 12 4.0 13 6.5 14 5.5 15 6.0 16 7.0 17 10.5 18 12.5 19 12.5 20 19.0 21 24.0 22 30.0 23 37.5 24 37.5 25 53.0 26 83.5 27 99.5 28 115.0 29 158.5 30 180.0 31 236.5 32 342.0 33 501.0 34 942.0 35 1915.0 36 3675.0 37 6680.0 38 11079.0 39 16589.5 40 22470.0 41 27925.5 42 32755.5 43 36497.0 44 38675.5 45 39421.5 46 38289.0 47 34920.0 48 31739.0 49 29335.0 50 26111.0 51 21975.5 52 18196.5 53 15775.5 54 14196.0 55 12919.5 56 11163.5 57 9765.5 58 9113.5 59 8541.5 60 7448.0 61 5956.5 62 4814.5 63 3663.5 64 2632.5 65 1949.5 66 1616.5 67 1419.0 68 1078.5 69 759.5 70 539.0 71 387.5 72 296.5 73 222.5 74 166.5 75 138.0 76 112.5 77 66.5 78 44.0 79 35.5 80 24.5 81 19.0 82 13.5 83 6.0 84 6.0 85 6.5 86 5.5 87 7.0 88 7.0 89 3.5 90 1.5 91 1.5 92 2.5 93 4.0 94 2.5 95 3.0 96 3.0 97 2.0 98 1.5 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15032456440040998 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03704169888335461 16-17 0.07309442036933811 18-19 0.026792296765144843 20-21 0.03937928182259543 22-23 0.06464315897362127 24-25 0.018251128333303362 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.019779547947422364 38-39 0.005754050311977415 40-41 0.004405444770107709 42-43 0.003776095517235179 44-45 0.012047542840702714 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.016902522791433658 60-61 0.019689640911297716 62-63 0.02868034452376243 64-65 0.0482800783989355 66-67 0.018520849441677305 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01618326650243648 80-81 0.05736068904752486 82-83 0.05034794022980238 84-85 0.0312876485713772 86-87 0.05781022422814809 88-89 0.03407476669124126 90-91 0.0 92-93 0.004315537733983061 94-95 0.0 96-97 0.0 98-99 6.293492528725298E-4 100-101 0.04603240249581932 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 556130.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.91948372770762 #Duplication Level Percentage of deduplicated Percentage of total 1 77.29027129949854 47.08483424739908 2 12.931427904736301 15.755518236372145 3 4.418306200797474 8.074827981105342 4 1.969213467398647 4.798538711342983 5 1.0522394004929467 3.205094051799145 6 0.6196397178610719 2.2648879025567346 7 0.3769359153772054 1.607391895424717 8 0.2620856208367414 1.2772896571064014 9 0.19396221053105958 1.0634469955413375 >10 0.7849826731496083 8.395683945993945 >50 0.067983094103986 2.855280305849484 >100 0.0323587565639314 3.419716492592396 >500 5.937386525490402E-4 0.19748957691629876 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 561 0.10087569453185406 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.394422167478827E-4 0.0 2 0.0 0.0 0.0 7.192562889971769E-4 0.0 3 0.0 0.0 0.0 7.192562889971769E-4 0.0 4 0.0 0.0 0.0 0.0010788844334957653 0.0 5 0.0 0.0 0.0 0.0010788844334957653 0.0 6 0.0 0.0 0.0 0.0010788844334957653 0.0 7 0.0 0.0 0.0 0.0012586985057450597 0.0 8 0.0 0.0 0.0 0.0012586985057450597 0.0 9 0.0 0.0 0.0 0.0017981407224929424 0.0 10-11 0.0 0.0 0.0 0.0021577688669915307 0.0 12-13 0.0 0.0 0.0 0.0021577688669915307 0.0 14-15 0.0 0.0 0.0 0.0021577688669915307 0.0 16-17 0.0 0.0 0.0 0.002337582939240825 0.0 18-19 0.0 0.0 0.0 0.002966932192113355 0.0 20-21 0.0 0.0 0.0 0.003776095517235179 0.0 22-23 0.0 0.0 0.0 0.006653120673223887 0.0 24-25 0.0 0.0 0.0 0.011418193587830184 0.0 26-27 0.0 0.0 0.0 0.02013917609192095 0.0 28-29 0.0 0.0 8.990703612464712E-5 0.03191699782424973 0.0 30-31 0.0 0.0 1.7981407224929423E-4 0.07057702335784799 0.0 32-33 0.0 0.0 1.7981407224929423E-4 0.16641792386672183 0.0 34-35 0.0 0.0 1.7981407224929423E-4 0.2911189829716073 0.0 36-37 0.0 0.0 1.7981407224929423E-4 0.481272364375236 0.0 38-39 0.0 0.0 1.7981407224929423E-4 0.8008918777983565 0.0 40-41 0.0 0.0 1.7981407224929423E-4 1.1816481757862372 0.0 42-43 0.0 0.0 1.7981407224929423E-4 1.517720676820168 0.0 44-45 0.0 0.0 1.7981407224929423E-4 1.8827432434862352 0.0 46-47 0.0 0.0 1.7981407224929423E-4 2.273569129520076 0.0 48-49 0.0 0.0 1.7981407224929423E-4 2.6656537140596623 0.0 50-51 0.0 0.0 1.7981407224929423E-4 3.06879686404258 0.0 52-53 0.0 0.0 1.7981407224929423E-4 3.453059536439322 0.0 54-55 0.0 0.0 1.7981407224929423E-4 3.8430762591480407 0.0 56-57 0.0 0.0 1.7981407224929423E-4 4.256648625321418 0.0 58-59 0.0 0.0 1.7981407224929423E-4 4.684426303202489 0.0 60-61 0.0 0.0 1.7981407224929423E-4 5.13638897380109 0.0 62-63 0.0 0.0 1.7981407224929423E-4 5.5923974610253 0.0 64-65 0.0 0.0 1.7981407224929423E-4 6.019995324834122 0.0 66-67 0.0 0.0 1.7981407224929423E-4 6.486792656393289 0.0 68-69 0.0 0.0 1.7981407224929423E-4 6.992250013486055 0.0 70-71 0.0 0.0 1.7981407224929423E-4 7.515059428550878 0.0 72-73 0.0 0.0 1.7981407224929423E-4 8.08507003758114 0.0 74-75 0.0 0.0 1.7981407224929423E-4 8.63125528203837 0.0 76-77 0.0 0.0 1.7981407224929423E-4 9.16170679517379 0.0 78-79 0.0 0.0 1.7981407224929423E-4 9.74385485408088 0.0 80-81 0.0 0.0 1.7981407224929423E-4 10.353334651969863 0.0 82-83 0.0 0.0 1.7981407224929423E-4 10.990865445129735 0.0 84-85 0.0 0.0 1.7981407224929423E-4 11.6112239943898 0.0 86-87 0.0 0.0 1.7981407224929423E-4 12.233650405480734 0.0 88-89 0.0 0.0 1.7981407224929423E-4 12.875137108230089 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 590 0.0 37.08959 1 ATGCGGG 90 5.700167E-7 36.936787 8 CCGTGCG 70 2.0512204E-4 33.930695 9 GTATAAT 155 1.3315002E-9 30.691246 1 AAATGCG 125 2.1561391E-7 30.390965 6 GTATCAA 820 0.0 29.00697 1 ACCGTGC 90 8.952544E-4 26.383419 8 CCCCTAG 110 9.371748E-5 25.948051 1 TCGCACC 240 2.237357E-10 23.785715 1 AGACCGC 180 1.952867E-7 23.742943 6 ATAATAA 385 0.0 23.434591 5 ATCAACG 975 0.0 23.377666 3 TCAACGC 1015 0.0 22.924221 4 GTACATG 1865 0.0 22.701647 1 AGGCCGA 105 0.0021986002 22.612328 6 AATGCGG 150 3.0365421E-5 22.16008 7 GTTATGC 150 3.0365421E-5 22.16008 3 TACATGG 1895 0.0 22.051493 2 TTACACG 195 4.2254214E-7 21.916563 4 TATCAAC 1080 0.0 21.544521 2 >>END_MODULE