##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224539_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 587101 Sequences flagged as poor quality 0 Sequence length 101 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09477926285256 34.0 31.0 34.0 31.0 34.0 2 32.254276521416244 34.0 31.0 34.0 31.0 34.0 3 32.40145903345421 34.0 31.0 34.0 31.0 34.0 4 35.64734687898675 37.0 37.0 37.0 35.0 37.0 5 35.63357241769304 37.0 37.0 37.0 35.0 37.0 6 35.72739613797285 37.0 37.0 37.0 35.0 37.0 7 35.70027984963405 37.0 37.0 37.0 35.0 37.0 8 35.74024401252936 37.0 37.0 37.0 35.0 37.0 9 37.46273980115858 39.0 39.0 39.0 35.0 39.0 10-11 37.541102808545716 39.0 39.0 39.0 35.0 39.0 12-13 37.533153580048406 39.0 39.0 39.0 35.0 39.0 14-15 39.022848709165885 41.0 40.0 41.0 36.0 41.0 16-17 38.85062876745228 41.0 40.0 41.0 35.5 41.0 18-19 38.91089693255505 41.0 40.0 41.0 36.0 41.0 20-21 38.962282469285526 41.0 40.0 41.0 36.0 41.0 22-23 38.91894750647674 41.0 40.0 41.0 36.0 41.0 24-25 38.848810511308955 41.0 39.0 41.0 35.0 41.0 26-27 38.65826919048 41.0 39.0 41.0 35.0 41.0 28-29 38.584723923141 41.0 39.0 41.0 35.0 41.0 30-31 38.51541216928604 41.0 39.0 41.0 35.0 41.0 32-33 38.31987937339572 40.5 39.0 41.0 34.0 41.0 34-35 38.3082008036096 40.0 38.0 41.0 34.0 41.0 36-37 38.2733558621089 40.0 38.0 41.0 34.0 41.0 38-39 38.13021354077067 40.0 38.0 41.0 34.0 41.0 40-41 38.00815447427274 40.0 38.0 41.0 33.5 41.0 42-43 37.81263445301575 40.0 37.5 41.0 33.0 41.0 44-45 37.57935176400653 40.0 37.0 41.0 33.0 41.0 46-47 37.365345996685406 40.0 36.5 41.0 32.0 41.0 48-49 37.08453315528334 39.5 36.0 41.0 32.0 41.0 50-51 35.73179657333236 38.0 34.0 40.0 29.5 40.5 52-53 35.99442940822789 38.5 35.0 39.5 30.5 40.5 54-55 36.34036051718529 38.5 35.0 41.0 31.0 41.0 56-57 36.08792609789457 37.5 35.0 41.0 31.0 41.0 58-59 35.86371765675753 37.0 35.0 40.0 31.0 41.0 60-61 35.54932456255398 36.5 35.0 40.0 30.5 41.0 62-63 35.225218488811976 36.0 35.0 39.5 30.0 41.0 64-65 34.95696737017992 35.0 35.0 39.0 30.0 41.0 66-67 34.69405689992011 35.0 35.0 39.0 29.0 41.0 68-69 34.389172391121804 35.0 34.0 37.5 29.0 40.5 70-71 34.129321019722326 35.0 34.0 37.0 29.0 40.0 72-73 33.83697523935405 35.0 34.0 36.5 29.0 39.0 74-75 33.60038732688243 35.0 34.0 36.0 28.5 39.0 76-77 33.34739423029427 35.0 34.0 36.0 28.0 38.0 78-79 33.175438297669395 35.0 34.0 35.0 28.0 37.0 80-81 32.9447156451786 35.0 34.0 35.0 27.0 37.0 82-83 32.764313124998935 35.0 33.0 35.0 27.0 36.0 84-85 32.62639988690191 35.0 33.0 35.0 27.0 36.0 86-87 32.461463189468255 35.0 33.0 35.0 26.0 36.0 88-89 32.36931975929184 35.0 33.0 35.0 26.0 35.0 90-91 32.224723684681166 35.0 33.0 35.0 25.0 35.0 92-93 32.12802652354535 35.0 33.0 35.0 25.0 35.0 94-95 32.01937741547025 35.0 33.0 35.0 25.0 35.0 96-97 31.88831308412011 35.0 33.0 35.0 24.5 35.0 98-99 31.835242147432893 35.0 33.0 35.0 24.0 35.0 100-101 30.467198148189155 34.0 29.5 35.0 20.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 7.0 7 469.0 8 2166.0 9 1449.0 10 996.0 11 1064.0 12 1227.0 13 1258.0 14 1289.0 15 1275.0 16 1302.0 17 1388.0 18 1507.0 19 1668.0 20 1920.0 21 2322.0 22 2801.0 23 2890.0 24 3012.0 25 3183.0 26 3309.0 27 3662.0 28 4134.0 29 4668.0 30 5706.0 31 7499.0 32 10138.0 33 14700.0 34 25454.0 35 48890.0 36 113230.0 37 172414.0 38 122333.0 39 17769.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.73251497741447 15.970222580072873 11.651677879825867 28.645584562686793 2 18.356466774882005 18.21628646519083 33.02378977382086 30.40345698610631 3 21.71517336880707 23.446732333959574 25.394778751867225 29.44331554536613 4 15.229917850591296 15.610261266800771 33.10435512799331 36.05546575461462 5 16.288509132159543 36.233969964282124 31.256121178468444 16.221399725089892 6 33.00931185605202 32.88820833212684 18.21969303407761 15.882786777743524 7 29.24931144726376 28.369394703807348 20.50498977177692 21.87630407715197 8 28.180841115923837 31.06893021813964 19.27555906053643 21.47466960540009 9 28.28116456963964 14.03063527399885 18.2174787643012 39.47072139206031 10-11 28.185439983920997 22.837041667447338 24.74369827338056 24.233820075251106 12-13 28.717460879814542 20.542462029531546 25.024910534984613 25.7151665556693 14-15 25.929847906963666 22.208922825541542 22.406056800823976 29.455172466670813 16-17 25.929644044440543 24.563737341629217 23.754487900033492 25.752130713896747 18-19 25.75551457278299 24.574358886991188 24.048520573967043 25.62160596625878 20-21 26.56241081157526 22.939837908158182 23.862754402660123 26.634996877606433 22-23 26.956382432992083 23.85809165262058 22.94246871373085 26.243057200656487 24-25 26.07613158208548 23.379669852302346 23.94286298359483 26.601335582017345 26-27 25.836099751150144 24.811659322671908 24.066302050243486 25.285938875934466 28-29 25.702477086566027 24.869145172636394 24.068431155797725 25.359946584999854 30-31 25.769501329413508 23.987865801625276 24.159471709297037 26.08316115966418 32-33 25.3718695761036 24.558806747050337 24.333377050967382 25.735946625878682 34-35 26.2910470259802 23.506858274811318 23.965382446972498 26.23671225223599 36-37 25.040162455642424 23.96714770754577 25.070656960668902 25.922032876142904 38-39 25.47410448822606 24.361309905541063 23.891101816531123 26.27348378970175 40-41 25.839120518231972 24.000933444392775 24.600518163839933 25.559427873535316 42-43 25.873024660077586 24.325882648520437 24.58257570273343 25.218516988668544 44-45 25.677610470756473 23.565078967608077 24.535959369349342 26.2213511922861 46-47 25.492717607362277 23.48480074126939 24.517416935075907 26.505064716292427 48-49 24.836271782878924 24.28117138277741 24.833716856213837 26.048839978129827 50-51 25.23671395552043 24.477049093767512 24.282278517665613 26.003958433046442 52-53 25.539813422222068 24.330140810524938 23.730840179117394 26.3992055881356 54-55 25.655040614817555 23.598665306310156 24.08265358090005 26.663640497972242 56-57 25.562978090652205 23.79692761552101 24.25689957945907 26.383194714367715 58-59 25.855848182344726 24.372253074852644 24.42455112261933 25.347347620183296 60-61 25.36553331323177 24.862738684778517 23.91387672289994 25.857851279089772 62-63 24.9127060320792 24.105061133462872 24.784160925865507 26.198071908592418 64-65 26.162699058458074 23.174915843992526 24.005186957970135 26.65719813957927 66-67 25.0733161559592 24.181171610485297 23.62547645918954 27.120035774365963 68-69 24.964018116133342 24.390948065154035 24.92663102260088 25.718402796111743 70-71 25.888049926673606 23.866506785033582 24.412579777585115 25.8328635107077 72-73 25.312254620584874 24.109480310883477 25.094745197163693 25.48351987136796 74-75 25.37536130921255 23.998596493618646 25.088783701611817 25.53725849555698 76-77 25.55548363910128 23.577970400322943 24.086911792008532 26.779634168567245 78-79 25.816700354252003 22.745465804332625 24.839206727636512 26.59862711377886 80-81 25.25453840549764 24.134220067399742 24.16378733719895 26.447454189903674 82-83 24.842290914048125 24.446527162429284 24.806165223911115 25.905016699611476 84-85 25.319300278133905 23.39757814796042 25.24876586066045 26.034355713245223 86-87 25.249385430113712 24.668515701887806 24.307144348300294 25.77495451969819 88-89 25.72750235337715 23.606268289254544 24.077795620375774 26.588433736992535 90-91 25.21431576508982 23.435831313521867 24.46665905866282 26.883193862725495 92-93 25.066643047064897 23.834278969072518 24.842909775960127 26.25616820790246 94-95 25.417432434964343 23.33601884513908 25.029850059870444 26.21669866002613 96-97 25.89631085622406 24.06059604735812 24.649080822550122 25.3940122738677 98-99 24.50446859718241 24.219932992333465 24.898611302731915 26.37698710775221 100-101 25.620466314621794 23.621342166831102 24.093007325464296 26.665184193082816 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 1.5 3 1.0 4 0.5 5 1.0 6 0.5 7 4.0 8 7.0 9 6.5 10 8.0 11 10.0 12 11.0 13 10.5 14 11.0 15 9.0 16 10.5 17 15.5 18 14.0 19 14.0 20 21.0 21 27.5 22 25.5 23 28.0 24 44.0 25 68.5 26 93.5 27 104.0 28 112.0 29 156.0 30 178.5 31 187.5 32 251.0 33 378.5 34 589.5 35 960.0 36 1733.0 37 2871.0 38 4597.5 39 6778.0 40 8929.0 41 11273.5 42 13527.5 43 15435.5 44 16930.5 45 19013.5 46 22099.5 47 22868.0 48 23042.0 49 25518.5 50 28337.5 51 29306.0 52 29710.5 53 31138.0 54 33447.0 55 34339.0 56 30610.0 57 27376.5 58 26935.5 59 26544.5 60 22781.0 61 17616.0 62 14565.0 63 10757.5 64 6858.0 65 4482.5 66 3483.0 67 3199.0 68 2518.5 69 1592.0 70 997.0 71 680.0 72 506.5 73 382.5 74 280.5 75 201.0 76 141.5 77 92.5 78 62.5 79 41.0 80 24.0 81 19.0 82 14.5 83 9.5 84 10.0 85 7.0 86 4.0 87 4.0 88 8.0 89 7.0 90 4.0 91 5.5 92 4.5 93 3.0 94 2.5 95 2.0 96 4.0 97 4.5 98 2.5 99 1.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1507406732402091 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03244756864662128 16-17 0.06549128684842982 18-19 0.022738847319285778 20-21 0.036024465977744884 22-23 0.05825232796401301 24-25 0.015499888434868957 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.018736128877314125 38-39 0.003491733108953996 40-41 0.004769196441498141 42-43 0.003151076220275558 44-45 0.009623557105165891 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.013796603991476765 60-61 0.013966932435815984 62-63 0.025123445540034848 64-65 0.04164530464093912 66-67 0.015074067324020909 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.015244395768360128 80-81 0.051694682856953056 82-83 0.04445572397253624 84-85 0.026145416206070166 86-87 0.05254632507864916 88-89 0.03040362731455065 90-91 0.0 92-93 0.003065911998105948 94-95 0.0 96-97 0.0 98-99 6.813137773568773E-4 100-101 0.041560140418769514 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 587101.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.563391778883414 #Duplication Level Percentage of deduplicated Percentage of total 1 79.95181107445792 40.42634746789086 2 12.251659733509005 12.389709420939722 3 3.541740928409678 5.3724730242745435 4 1.435969441660868 2.9042994184481175 5 0.7248705685696962 1.8325957273785762 6 0.40764164603776676 1.2367046552397911 7 0.2746560650584053 0.9721279555396247 8 0.19314012736890235 0.7812655942701802 9 0.12853685419887284 0.5849333385194541 >10 0.8100611252049401 8.172173472418045 >50 0.1146958276709871 4.18575873121932 >100 0.1529277692523215 16.339492564807358 >500 0.010923412089451532 3.718008676172177 >1k 0.0013654265111814415 1.0841099528822915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2193 0.37353027843590797 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1471 0.2505531416229916 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1314 0.2238115758617342 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1303 0.22193796297400276 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 974 0.16589990478639963 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 974 0.16589990478639963 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 912 0.155339541237368 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 870 0.1481857465751208 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 839 0.142905564800605 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 832 0.14171326569023046 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 821 0.13983965280249905 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 742 0.12638370569970073 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 741 0.12621337725536153 No Hit CCGGTAAATGCGGGAGCTCCGCGCGCAGTTGCGGCATCGCATTGCCCATA 733 0.12485074970064777 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 732 0.12468042125630854 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 721 0.12280680836857713 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 711 0.12110352392518493 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 708 0.12059253859216727 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 664 0.11309808704124164 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 629 0.10713659148936895 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 625 0.10645527771201208 No Hit CGCCATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCA 624 0.10628494926767285 No Hit CCACAGAAGCAGATCTTGGTGACGCTGCCGAGTGGCATTTTTTTGACATC 622 0.10594429237899441 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 8.516422216960965E-5 0.0 12-13 0.0 0.0 0.0 1.703284443392193E-4 0.0 14-15 0.0 0.0 0.0 5.10985333017658E-4 0.0 16-17 0.0 0.0 0.0 5.10985333017658E-4 0.0 18-19 0.0 0.0 0.0 5.10985333017658E-4 0.0 20-21 0.0 0.0 0.0 5.961495551872676E-4 0.0 22-23 0.0 0.0 0.0 6.813137773568772E-4 0.0 24-25 0.0 0.0 0.0 0.001277463332544145 0.0 26-27 0.0 0.0 0.0 0.002214269776409851 0.0 28-29 0.0 0.0 0.0 0.004428539552819702 0.0 30-31 0.0 0.0 0.0 0.012263647992423791 0.0 32-33 0.0 0.0 0.0 0.03432118153435269 0.0 34-35 0.0 0.0 0.0 0.06234021062815427 0.0 36-37 0.0 0.0 0.0 0.11088381726483176 0.0 38-39 0.0 0.0 0.0 0.21214407742449765 0.0 40-41 0.0 0.0 0.0 0.34236017312183087 0.0 42-43 0.0 0.0 0.0 0.45903515749419604 0.0 44-45 0.0 0.0 0.0 0.5838007429726741 0.0 46-47 0.0 0.0 0.0 0.7235552315530036 0.0 48-49 0.0 0.0 0.0 0.875999189236605 0.0 50-51 0.0 0.0 0.0 1.0315090589183122 0.0 52-53 0.0 0.0 0.0 1.1865931074891714 8.516422216960965E-5 54-55 0.0 0.0 0.0 1.3424436340595571 1.703284443392193E-4 56-57 0.0 0.0 0.0 1.519840708838854 1.703284443392193E-4 58-59 0.0 0.0 0.0 1.7119711940534934 1.703284443392193E-4 60-61 0.0 0.0 0.0 1.9323762010284433 1.703284443392193E-4 62-63 0.0 0.0 0.0 2.160871809109506 1.703284443392193E-4 64-65 0.0 0.0 0.0 2.380936159195777 1.703284443392193E-4 66-67 0.0 0.0 0.0 2.616755890383426 1.703284443392193E-4 68-69 0.0 0.0 0.0 2.8925176417686225 1.703284443392193E-4 70-71 0.0 0.0 0.0 3.199960483800913 1.703284443392193E-4 72-73 0.0 0.0 0.0 3.5234993638232606 1.703284443392193E-4 74-75 0.0 0.0 0.0 3.8432910180701447 1.703284443392193E-4 76-77 0.0 0.0 0.0 4.156099206099121 1.703284443392193E-4 78-79 0.0 0.0 0.0 4.513192789656294 1.703284443392193E-4 80-81 0.0 0.0 0.0 4.913720126519968 1.703284443392193E-4 82-83 0.0 0.0 0.0 5.344310433809515 1.703284443392193E-4 84-85 0.0 0.0 0.0 5.77081285843492 1.703284443392193E-4 86-87 0.0 0.0 0.0 6.222183235933851 1.703284443392193E-4 88-89 0.0 0.0 0.0 6.6778969887634325 1.703284443392193E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 920 0.0 53.265026 1 GGTATCA 500 0.0 47.57653 1 ATGCGGG 210 0.0 40.71042 8 ATCAACG 1255 0.0 38.220203 3 TCAACGC 1275 0.0 36.875706 4 AATGCGG 215 0.0 35.34247 7 TATATCG 70 2.0542867E-4 33.922455 5 AAATGCG 240 0.0 31.66096 6 CGCAGAG 1535 0.0 30.632267 8 ACGCAGA 1600 0.0 29.682148 7 GTAAATG 275 0.0 29.358347 4 TATAGCA 65 0.00584692 29.225504 4 TACATGG 2635 0.0 29.197773 2 GTACATG 2615 0.0 29.109922 1 CCGTGCG 100 4.9436247E-5 28.504574 9 AAACCGT 85 6.410167E-4 27.936142 6 TATCAAC 1745 0.0 27.76004 2 TATACAG 120 5.3833355E-6 27.70334 5 ACATGGG 2790 0.0 27.065014 3 GCAGAGT 1755 0.0 26.528475 9 >>END_MODULE