##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224538_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 889795 Sequences flagged as poor quality 0 Sequence length 101 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93759910990734 34.0 31.0 34.0 30.0 34.0 2 32.11413752605937 34.0 31.0 34.0 30.0 34.0 3 32.26281446850117 34.0 31.0 34.0 30.0 34.0 4 35.546217949078155 37.0 35.0 37.0 35.0 37.0 5 35.53171460842104 37.0 35.0 37.0 35.0 37.0 6 35.62117004478559 37.0 37.0 37.0 35.0 37.0 7 35.58400755230137 37.0 37.0 37.0 35.0 37.0 8 35.625556448395415 37.0 37.0 37.0 35.0 37.0 9 37.32966919346591 39.0 38.0 39.0 35.0 39.0 10-11 37.39266235481206 39.0 38.0 39.0 35.0 39.0 12-13 37.37845795941762 39.0 38.0 39.0 35.0 39.0 14-15 38.82626054315882 41.0 39.0 41.0 36.0 41.0 16-17 38.64977831972533 41.0 39.0 41.0 35.5 41.0 18-19 38.70049281014166 41.0 39.0 41.0 35.0 41.0 20-21 38.75635118201384 41.0 39.0 41.0 35.0 41.0 22-23 38.707096578425364 41.0 39.0 41.0 35.0 41.0 24-25 38.63391961069684 41.0 39.0 41.0 35.0 41.0 26-27 38.432786203563744 40.5 39.0 41.0 34.0 41.0 28-29 38.343994965132424 40.0 38.5 41.0 34.0 41.0 30-31 38.26985204457206 40.0 38.0 41.0 34.0 41.0 32-33 38.07222506307633 40.0 38.0 41.0 33.0 41.0 34-35 38.05075775880961 40.0 38.0 41.0 33.0 41.0 36-37 38.028726841575875 40.0 38.0 41.0 33.0 41.0 38-39 37.88555847133328 40.0 38.0 41.0 33.0 41.0 40-41 37.76282626897206 40.0 38.0 41.0 33.0 41.0 42-43 37.58450373400615 40.0 37.0 41.0 32.0 41.0 44-45 37.35997055501548 40.0 37.0 41.0 32.0 41.0 46-47 37.135284531830365 40.0 36.0 41.0 31.0 41.0 48-49 36.87226889339679 39.5 35.5 41.0 31.0 41.0 50-51 35.53211357672273 38.0 34.0 40.0 28.5 40.5 52-53 35.843057670587044 38.5 35.0 39.5 29.5 40.5 54-55 36.22234447260324 38.5 35.0 40.5 30.0 41.0 56-57 35.99145196365455 37.5 35.0 40.5 30.0 41.0 58-59 35.78595800156216 37.0 35.0 40.0 30.0 41.0 60-61 35.47652886338988 36.5 35.0 40.0 29.5 41.0 62-63 35.14512387684804 36.0 35.0 40.0 29.0 41.0 64-65 34.87026225141746 35.0 34.5 39.0 29.0 41.0 66-67 34.603279968981624 35.0 34.0 39.0 29.0 41.0 68-69 34.27999539219708 35.0 34.0 38.0 28.0 40.5 70-71 33.99440095752392 35.0 34.0 37.0 28.0 40.0 72-73 33.69054950859468 35.0 34.0 37.0 27.0 39.0 74-75 33.44823976309149 35.0 34.0 36.0 27.0 39.0 76-77 33.18356812524233 35.0 34.0 36.0 27.0 38.5 78-79 33.00556307913621 35.0 33.0 35.0 27.0 37.0 80-81 32.76251215167539 35.0 33.0 35.0 26.0 37.0 82-83 32.572127287746056 35.0 33.0 35.0 26.0 36.0 84-85 32.41479722857512 35.0 33.0 35.0 25.5 36.0 86-87 32.23729173573688 35.0 33.0 35.0 25.0 36.0 88-89 32.1288184357071 35.0 33.0 35.0 25.0 35.5 90-91 31.983287161649596 35.0 33.0 35.0 25.0 35.0 92-93 31.877435251940053 35.0 33.0 35.0 24.0 35.0 94-95 31.747070392618525 35.0 32.0 35.0 24.0 35.0 96-97 31.613448603329978 35.0 32.0 35.0 24.0 35.0 98-99 31.56082637011896 35.0 32.0 35.0 24.0 35.0 100-101 30.18020386718289 34.0 29.5 35.0 19.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 10.0 7 549.0 8 2282.0 9 1598.0 10 1191.0 11 1615.0 12 2224.0 13 2432.0 14 2360.0 15 2360.0 16 2405.0 17 2520.0 18 2792.0 19 2960.0 20 3486.0 21 4232.0 22 4839.0 23 5013.0 24 5054.0 25 5413.0 26 5641.0 27 6178.0 28 7060.0 29 8167.0 30 10134.0 31 12781.0 32 17592.0 33 25374.0 34 42921.0 35 77913.0 36 170663.0 37 245335.0 38 177869.0 39 26830.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87030689831777 16.42280266319978 11.75950157867189 27.947388859810555 2 18.050449822711972 18.480886046786058 33.650784731314516 29.817879399187454 3 21.114526379671723 23.636792744396182 25.857641366831686 29.39103950910041 4 14.518063149377102 15.510876100674874 33.75676419849516 36.21429655145286 5 15.81251861383802 37.15395119100467 31.55007614113363 15.48345405402368 6 33.08953185846178 33.50591990289898 18.14069532869931 15.26385290993993 7 29.551863069583444 28.737181036081346 20.60822998555847 21.10272590877674 8 28.336864109148735 31.47028248079614 19.214088638394237 20.978764771660888 9 28.183008445765594 13.693041655662258 18.144404048123445 39.9795458504487 10-11 27.961384363814133 22.875718564388425 25.19209480835473 23.970802263442703 12-13 28.485662427862597 20.62463825937435 25.52717198905366 25.362527323709394 14-15 25.608161512317256 22.310648349585076 22.619943043005566 29.461247095092098 16-17 25.838806151451315 24.674470892180892 23.977241924617392 25.509481031750408 18-19 25.68577712601729 24.625642103677507 24.124718328740222 25.563862441564982 20-21 26.45296101432793 22.9355425720121 23.92962127417245 26.681875139487516 22-23 26.753862842316405 23.914954205981143 23.10260030849879 26.228582643203662 24-25 25.86406420280154 23.607535140062847 23.949029836946963 26.579370820188654 26-27 25.699571249557486 24.78166319208357 24.314870279109233 25.203895279249718 28-29 25.460190268545002 24.951477587534207 24.24845048578605 25.33988165813474 30-31 25.553133025022618 24.23867295275878 24.266600733876903 25.941593288341696 32-33 25.31549401828511 24.533459954259126 24.308857658224646 25.842188369231117 34-35 26.100618681831207 23.600323670058835 24.084423940345808 26.214633707764147 36-37 24.898351935556757 24.053804622134493 25.17887473878386 25.868968703524885 38-39 25.314357965720706 24.337229558864852 24.086709749929756 26.261702725484685 40-41 25.829466582222853 23.845636410943154 24.67986560171555 25.64503140511844 42-43 25.850702151691742 24.156771731861785 24.70455682118312 25.28796929526336 44-45 25.693024625514365 23.673550360969646 24.461355510421082 26.172069503094907 46-47 25.413718890306193 23.664945296388492 24.45664450800465 26.464691305300658 48-49 24.900960333559976 24.366792351047152 24.755084036210587 25.977163279182285 50-51 25.088700206227276 24.69950943756708 24.2177692614591 25.994021094746543 52-53 25.5285206142988 24.376907040385706 23.59060232975011 26.503970015565383 54-55 25.430351934996263 23.59633398704196 24.24783236588203 26.725481712079745 56-57 25.43271202917526 24.034693384431247 24.17455706089605 26.358037525497448 58-59 25.862815097240926 24.277184408180332 24.45270365965789 25.407296834920857 60-61 25.27828953802194 24.760602991577407 24.095214757579267 25.86589271282138 62-63 24.9543156338618 24.133767646306605 24.765844788384843 26.146071931446752 64-65 26.176047100917604 23.266535443474233 24.042405218792464 26.515012236815693 66-67 25.0793872038506 24.07520230388691 23.714208314271037 27.131202177991447 68-69 25.04610612556825 24.35864440685776 25.09729769216505 25.497951775408943 70-71 25.65866295045488 23.899774667198624 24.59274327232677 25.848819110019722 72-73 25.41978770390933 24.170174028849342 25.007726498800288 25.402311768441045 74-75 25.25385060603847 24.07189296410971 25.080158913008056 25.594097516843767 76-77 25.476542349642333 23.4008395192151 24.041492703375496 27.081125427767073 78-79 25.583545454187796 22.7937791871083 24.867908049052044 26.75476730965186 80-81 25.092930845731143 24.180800045882055 24.206215107004716 26.520054001382082 82-83 24.866907710497777 24.440967406233817 24.65298177890797 26.039143104360434 84-85 25.09321169298741 23.403625039698934 25.310860223213403 26.192303044100246 86-87 25.23941739144125 24.797299272863853 24.25149734268062 25.711785993014274 88-89 25.367637138771215 23.679710477321173 24.075791712761845 26.87686067114577 90-91 24.882248158283648 23.497940536865233 24.598755893211358 27.02105541163976 92-93 24.8068732716654 23.72602668905459 25.047948026755364 26.41915201252465 94-95 25.337690142111384 23.26524648935991 25.133541995628207 26.2635213729005 96-97 25.780488764265925 24.052899825240644 24.717996841969217 25.448614568524206 98-99 24.43132649276796 24.178289259263423 24.91419323660639 26.476191011362232 100-101 25.388482478372037 23.396258874379047 24.369095459871055 26.846163187377865 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.5 3 1.0 4 1.0 5 1.5 6 2.5 7 5.0 8 8.0 9 9.5 10 10.0 11 7.5 12 8.5 13 17.0 14 19.0 15 17.5 16 19.5 17 22.0 18 25.0 19 32.5 20 38.0 21 51.0 22 57.5 23 58.5 24 74.5 25 92.5 26 125.5 27 147.5 28 173.0 29 205.0 30 255.5 31 321.0 32 448.0 33 745.5 34 1245.5 35 2139.5 36 3891.5 37 6459.5 38 9491.5 39 12794.5 40 16045.0 41 18850.5 42 20951.5 43 22547.5 44 24038.5 45 26606.5 46 30102.0 47 31055.5 48 32362.5 49 36865.0 50 41814.0 51 44422.0 52 45977.5 53 48385.5 54 52078.5 55 54493.5 56 48457.0 57 41942.0 58 40199.5 59 38517.0 60 33228.0 61 26417.5 62 21705.0 63 15802.0 64 10307.0 65 6911.5 66 5214.0 67 4493.0 68 3395.0 69 2182.0 70 1452.5 71 1029.0 72 762.0 73 585.0 74 464.0 75 348.0 76 220.0 77 139.0 78 89.0 79 63.5 80 50.5 81 39.5 82 30.5 83 21.5 84 15.0 85 15.0 86 12.0 87 9.5 88 8.5 89 7.5 90 6.5 91 5.0 92 5.5 93 5.5 94 3.5 95 3.5 96 2.5 97 4.5 98 5.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1562157575621351 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03955967385746155 16-17 0.0791193477149231 18-19 0.0268039267471721 20-21 0.04253788794048067 22-23 0.07310672683033732 24-25 0.019836029647278305 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.02315140004158261 38-39 0.005057344669277756 40-41 0.005787850010395653 42-43 0.003371563112851837 44-45 0.012137627206266613 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.01674543012716412 60-61 0.01843121168359004 62-63 0.03006310442292888 64-65 0.052877348153226304 66-67 0.018880753431970286 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.018936946150517817 80-81 0.0627672666175917 82-83 0.052652577279036175 84-85 0.0323108131648301 86-87 0.06214914671356886 88-89 0.03719957967846527 90-91 0.0 92-93 0.0033153703943043064 94-95 0.0 96-97 0.0 98-99 5.619271854753061E-4 100-101 0.04911243601054175 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 889795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.3132874290193 #Duplication Level Percentage of deduplicated Percentage of total 1 76.94572631159387 37.944467180382816 2 13.287381518277819 13.104889279797458 3 4.413991011629814 6.5300522239682595 4 1.9441615206022347 3.834919834955889 5 0.9987269758493766 2.4625255211587764 6 0.5673738974193846 1.6787443249899017 7 0.3459006794590487 1.1940249739639999 8 0.2532937477958036 0.999259791122239 9 0.1723150906577121 0.7647681234565149 >10 0.8486507179307228 7.7056423905241145 >50 0.08853092189558318 3.1143410122610193 >100 0.11573442110136552 12.653825705921044 >500 0.013602252676585606 4.5219114255976285 >1k 0.004610933110706985 3.4906282119003365 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3216 0.3614315656977169 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2910 0.32704162194662817 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2710 0.30456453452761595 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1644 0.18476165858428065 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1569 0.17633275080215105 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1551 0.17430981293443995 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1532 0.1721744896296338 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1508 0.16947723913935234 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1454 0.163408425536219 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1296 0.14565152647519933 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1285 0.14441528666715367 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1284 0.14430290123005862 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1170 0.13149096140122163 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1150 0.1292432526593204 No Hit CCGGTAAATGCGGGAGCTCCGCGCGCAGTTGCGGCATCGCATTGCCCATA 1102 0.12384875167875747 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 1095 0.12306205361909205 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 1091 0.12261251187071179 No Hit CCTAAATGTTGGGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCAC 1068 0.1200276468175254 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1044 0.11733039632724392 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1024 0.11508268758534268 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 994 0.11171112447249086 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 988 0.11103681184992048 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 982 0.11036249922735011 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 1.1238543709506122E-4 5 0.0 0.0 0.0 0.0 1.1238543709506122E-4 6 0.0 0.0 0.0 0.0 1.1238543709506122E-4 7 0.0 0.0 0.0 0.0 1.1238543709506122E-4 8 0.0 0.0 0.0 0.0 1.1238543709506122E-4 9 0.0 0.0 0.0 0.0 1.1238543709506122E-4 10-11 0.0 0.0 0.0 0.0 1.1238543709506122E-4 12-13 0.0 0.0 0.0 0.0 1.1238543709506122E-4 14-15 0.0 0.0 0.0 0.0 1.1238543709506122E-4 16-17 0.0 0.0 0.0 0.0 2.2477087419012245E-4 18-19 0.0 0.0 0.0 5.619271854753061E-5 3.371563112851837E-4 20-21 0.0 0.0 0.0 2.2477087419012245E-4 3.371563112851837E-4 22-23 0.0 0.0 0.0 6.181199040228367E-4 5.619271854753062E-4 24-25 0.0 0.0 0.0 0.001461010682235796 7.30505341117898E-4 26-27 0.0 0.0 0.0 0.002303901460448755 7.866980596654286E-4 28-29 0.0 0.0 0.0 0.003933490298327143 7.866980596654286E-4 30-31 0.0 0.0 0.0 0.011631892739338836 7.866980596654286E-4 32-33 0.0 0.0 0.0 0.031692693260807266 7.866980596654286E-4 34-35 0.0 0.0 0.0 0.05551840592496024 7.866980596654286E-4 36-37 0.0 0.0 0.0 0.09451615259694648 7.866980596654286E-4 38-39 0.0 0.0 0.0 0.17616417264650847 8.990834967604898E-4 40-41 0.0 0.0 0.0 0.2778168004989914 8.990834967604898E-4 42-43 0.0 0.0 0.0 0.3732320365926983 9.552762153080205E-4 44-45 0.0 0.0 0.0 0.4743789299782534 0.0010676616524030818 46-47 0.0 0.0 0.0 0.5821003714338696 0.0011238543709506123 48-49 0.0 0.0 0.0 0.6964525536780943 0.0013486252451407347 50-51 0.0 0.0 0.0 0.8247967228406543 0.0013486252451407347 52-53 0.0 0.0 0.0 0.9478025837411987 0.0013486252451407347 54-55 0.0 0.0 0.0 1.0682797723071045 0.0013486252451407347 56-57 0.0 0.0 0.0 1.2066262453711247 0.0014048179636882653 58-59 0.0 0.0 0.0 1.3536263970914648 0.0015172034007833266 60-61 0.0 0.0 0.0 1.5238341415719352 0.0015733961193308572 62-63 0.0 0.0 0.0 1.697076292853972 0.0015733961193308572 64-65 0.0 0.0 0.0 1.859417056737788 0.0015733961193308572 66-67 0.0 0.0 0.0 2.0358060002584866 0.0015733961193308572 68-69 0.0 0.0 0.0 2.2388302923707144 0.0015733961193308572 70-71 0.0 0.0 0.0 2.466354609769666 0.0015733961193308572 72-73 0.0 0.0 0.0 2.706297517967622 0.0016857815564259183 74-75 0.0 0.0 0.0 2.9416888159632277 0.0016857815564259183 76-77 0.0 0.0 0.0 3.174720019779837 0.0016857815564259183 78-79 0.0 0.0 0.0 3.4353980411218314 0.0016857815564259183 80-81 0.0 0.0 0.0 3.7368157834107856 0.0017419742749734488 82-83 0.0 0.0 0.0 4.06621749953641 0.0017981669935209796 84-85 0.0 0.0 0.0 4.389100860310521 0.0017981669935209796 86-87 0.0 0.0 0.0 4.727549604122298 0.0017981669935209796 88-89 0.0 0.0 0.0 5.079934142133863 0.0017981669935209796 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1160 0.0 45.518124 1 GGTATCA 665 0.0 32.90452 1 GTACATG 4230 0.0 32.72442 1 TACATGG 4160 0.0 32.642685 2 ATCAACG 1605 0.0 32.24517 3 TCAACGC 1655 0.0 31.270998 4 ACATGGG 4355 0.0 30.635954 3 ACCGTGC 205 1.8189894E-12 30.109444 8 TCGCACC 1145 0.0 29.496618 1 AATGCGG 425 0.0 29.046757 7 AAATGCG 435 0.0 28.379015 6 ATTAGAC 120 5.397289E-6 27.696827 3 ATACGAC 70 0.008407583 27.131588 3 CGCACCA 1255 0.0 26.86135 2 TATACAG 230 5.456968E-12 26.836678 5 CATGGGG 3310 0.0 26.68076 4 CATAATA 1330 0.0 26.417597 4 CATGGGA 1160 0.0 26.196014 4 AAACCGT 110 9.501057E-5 25.898333 6 ACCGTAT 165 8.439565E-8 25.898333 8 >>END_MODULE