##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224537_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 729821 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12748057400376 34.0 31.0 34.0 31.0 34.0 2 32.290484927125966 34.0 31.0 34.0 31.0 34.0 3 32.43538484094045 34.0 31.0 34.0 31.0 34.0 4 35.664276582888135 37.0 37.0 37.0 35.0 37.0 5 35.672958163714114 37.0 37.0 37.0 35.0 37.0 6 35.78149299622784 37.0 37.0 37.0 35.0 37.0 7 35.74956598946865 37.0 37.0 37.0 35.0 37.0 8 35.784351231329325 37.0 37.0 37.0 35.0 37.0 9 37.527544425276886 39.0 39.0 39.0 35.0 39.0 10-11 37.60193047336264 39.0 39.0 39.0 36.0 39.0 12-13 37.602779996738924 39.0 39.0 39.0 35.0 39.0 14-15 39.10436942757197 41.0 40.0 41.0 37.0 41.0 16-17 38.94845242874622 41.0 40.0 41.0 36.5 41.0 18-19 39.03747151698842 41.0 40.0 41.0 36.0 41.0 20-21 39.10198391112341 41.0 40.0 41.0 36.0 41.0 22-23 39.063502557476426 41.0 40.0 41.0 36.0 41.0 24-25 39.00829518470968 41.0 40.0 41.0 36.0 41.0 26-27 38.857323919152776 41.0 39.5 41.0 35.0 41.0 28-29 38.79842934089318 41.0 39.0 41.0 35.0 41.0 30-31 38.73506928411213 41.0 39.0 41.0 35.0 41.0 32-33 38.55861574276432 41.0 39.0 41.0 35.0 41.0 34-35 38.56846815863068 41.0 39.0 41.0 35.0 41.0 36-37 38.568321547338314 41.0 39.0 41.0 35.0 41.0 38-39 38.44660128990533 41.0 39.0 41.0 35.0 41.0 40-41 38.36301709597285 41.0 39.0 41.0 35.0 41.0 42-43 38.234870605258 40.0 38.0 41.0 34.0 41.0 44-45 38.07292267556017 40.0 38.0 41.0 34.0 41.0 46-47 37.920570249417324 40.0 38.0 41.0 33.0 41.0 48-49 37.733978605712906 40.0 37.5 41.0 33.0 41.0 50-51 36.48325411299483 39.0 35.5 40.0 31.5 40.5 52-53 36.78644146989467 39.0 36.0 40.0 31.5 40.5 54-55 37.24263689315599 40.0 36.0 41.0 33.0 41.0 56-57 37.11977183446352 40.0 35.0 41.0 32.5 41.0 58-59 36.99859075033467 40.0 35.0 41.0 32.5 41.0 60-61 36.78991218394647 39.0 35.0 41.0 32.0 41.0 62-63 36.544142330790706 39.0 35.0 41.0 31.5 41.0 64-65 36.338287059429646 39.0 35.0 41.0 31.0 41.0 66-67 36.149356486042464 38.0 35.0 41.0 31.0 41.0 68-69 35.895991619862954 37.0 35.0 40.5 31.0 41.0 70-71 35.63161240907017 37.0 35.0 40.0 30.5 41.0 72-73 35.341374117763124 36.0 35.0 39.5 30.0 41.0 74-75 35.05285611129304 36.0 35.0 39.0 30.0 41.0 76-77 34.709478077501196 35.0 35.0 39.0 30.0 40.5 78-79 34.43640837958897 35.0 35.0 37.5 29.5 39.0 80-81 34.09378327014432 35.0 34.0 37.0 29.0 39.0 82-83 33.7987903883281 35.0 34.0 37.0 29.0 39.0 84-85 33.5292996501882 35.0 34.0 36.0 29.0 37.0 86-87 33.26194094168296 35.0 34.0 36.0 29.0 37.0 88-89 33.07983532948491 35.0 34.0 35.5 28.5 37.0 90-91 32.87072172491611 35.0 34.0 35.0 27.0 36.0 92-93 32.70324093168051 35.0 34.0 35.0 27.0 36.0 94-95 32.545389211875246 35.0 34.0 35.0 27.0 36.0 96-97 32.386631790534935 35.0 33.0 35.0 26.0 36.0 98-99 32.324598771479586 35.0 33.0 35.0 25.0 35.0 100-101 31.111386901719733 34.5 31.0 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 8.0 7 683.0 8 3261.0 9 2175.0 10 1364.0 11 1365.0 12 1493.0 13 1498.0 14 1412.0 15 1333.0 16 1411.0 17 1498.0 18 1617.0 19 1762.0 20 1986.0 21 2620.0 22 3204.0 23 3159.0 24 3239.0 25 3306.0 26 3401.0 27 3577.0 28 3920.0 29 4386.0 30 5551.0 31 6975.0 32 9608.0 33 13841.0 34 23465.0 35 43066.0 36 93538.0 37 154766.0 38 231369.0 39 93919.0 40 45.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.31370913072952 19.22752859099305 13.579864036688688 24.878898241588747 2 15.619857471900644 21.231507451827227 38.139351978087774 25.009283098184348 3 20.275547395248143 26.28401523663369 28.271902660930092 25.168534707188073 4 13.663487348267589 17.782305524231283 37.742679369324804 30.81152775817632 5 13.605390910921994 38.499714313509756 34.18838317888907 13.706511596679185 6 28.469172577933495 37.16226307546645 19.818969308912735 14.549595037687324 7 26.095028781029868 31.022949462950507 23.25172884858068 19.63029290743895 8 24.471205953240588 35.35716292077098 21.77273605445719 18.39889507153124 9 26.553086304724033 15.93911383750262 20.2775749122045 37.23022494556885 10-11 25.36813821471292 25.894294628408883 27.71946819836645 21.018098958511743 12-13 25.964380306951977 23.461711844411166 28.187048605068917 22.386859243567944 14-15 22.949264729567005 25.45919706563463 25.34076976375535 26.25076844104301 16-17 22.670271967574234 28.200944334711604 26.729183535091693 22.39960016262247 18-19 22.52466664565142 27.767399596233155 27.138107175016344 22.569826583099083 20-21 23.338316037797274 26.50819336183139 26.95087958098677 23.20261101938457 22-23 23.82633267909648 26.839295617938475 26.40802030853563 22.92635139442941 24-25 23.050447478722404 26.81603865700881 26.67529578956817 23.458218074700614 26-27 22.535320304567833 27.988438260888625 27.098288484436594 22.377952950106945 28-29 22.370279835740543 27.792568314696343 27.207630364157787 22.629521485405327 30-31 22.39836891511754 27.334236751203377 27.178102575837087 23.08929175784199 32-33 22.386722223668542 27.317246283677775 27.680554546936854 22.615476945716825 34-35 22.85560431941531 26.87254820017511 27.20372529702489 23.06812218338469 36-37 22.04144535910243 26.96319310582539 27.941114999530605 23.05424653554158 38-39 22.480143219576632 27.19404320566849 27.11539028088275 23.21042329387213 40-41 22.6007110425358 26.95857002206849 27.721683508650287 22.71903542674542 42-43 22.66635242144669 27.30199468066885 27.578512204179006 22.45314069370546 44-45 22.727173064009975 26.70186233264358 27.652213832513397 22.91875077083305 46-47 22.81264858095341 26.378385932989048 27.330057644271676 23.478907841785862 48-49 22.107270138842264 26.9845619679346 27.44570243936527 23.462465453857863 50-51 22.234972685083054 27.26586382140278 27.218112386461886 23.281051107052278 52-53 22.354728077158644 27.084723514395996 26.90961208296281 23.65093632548255 54-55 22.781271023990815 26.576859257269938 26.979629251556204 23.66224046718305 56-57 22.484965491538336 26.820754678201915 27.078900168671495 23.61537966158825 58-59 22.58884118289546 27.15653397761549 27.169073360184516 23.085551479304538 60-61 22.38576881937416 27.39266555067299 26.956660570499807 23.264905059453046 62-63 22.092182566904214 26.909505329242545 27.636061356361267 23.36225074749197 64-65 22.95970088384574 26.273008605415484 26.99530146370886 23.771989047029916 66-67 22.321602324274693 26.82646055174115 26.775000342611243 24.07693678137291 68-69 22.30958002030635 26.858503660486612 28.028927641161328 22.802988678045715 70-71 22.9941314377087 26.50958248666454 27.41836696943497 23.077919106191793 72-73 22.455711743016437 26.656673348670427 28.039341153515725 22.84827375479741 74-75 22.645141753936922 26.563842366826933 27.74385774045965 23.047158138776496 76-77 22.54210278958813 26.260274779706254 27.166455884388093 24.03116654631752 78-79 22.746950801699327 25.612100863368507 27.601411538988625 24.03953679594354 80-81 22.53962639488406 26.558373143096475 27.133772457470563 23.768228004548902 82-83 22.052615308901256 26.86066285610883 27.591541466377045 23.495180368612868 84-85 22.537357926802105 25.817659737046796 28.001260969233037 23.64372136691806 86-87 22.278212538662338 26.95320211902516 27.25962171233027 23.508963629982233 88-89 22.643064992098203 26.116976730479553 26.86596827494137 24.373990002480873 90-91 22.496543673037635 26.068926490194173 27.219551095405585 24.214978741362607 92-93 22.38098761575121 26.239178512410284 27.766244906124708 23.6135889657138 94-95 22.713788723536318 25.82681232795439 27.73419783755195 23.725201110957343 96-97 23.103610337329293 26.186558073829065 27.523735272073562 23.186096316768083 98-99 22.119844398496603 26.22575920132966 27.702096290419604 23.952300109754145 100-101 22.816176803214304 25.94816371460022 27.3363957509983 23.899263731187173 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 1.5 2 1.5 3 2.5 4 1.5 5 1.5 6 3.5 7 6.0 8 7.0 9 9.0 10 10.5 11 12.5 12 16.0 13 19.5 14 26.5 15 25.0 16 17.5 17 25.5 18 37.5 19 41.5 20 46.5 21 50.5 22 55.5 23 72.0 24 101.0 25 130.0 26 161.5 27 191.5 28 223.0 29 269.0 30 414.5 31 787.0 32 1770.0 33 3888.0 34 6886.0 35 12154.5 36 20688.0 37 29850.0 38 36216.0 39 41673.0 40 47122.0 41 46735.5 42 41152.5 43 35577.5 44 30399.0 45 26893.0 46 25130.5 47 22055.0 48 20201.0 49 21034.5 50 22056.5 51 21511.0 52 20690.0 53 21389.5 54 23232.0 55 23961.5 56 20294.0 57 17165.0 58 16936.5 59 16845.0 60 14424.0 61 10852.0 62 8746.0 63 6125.5 64 3635.0 65 2295.5 66 1834.0 67 1714.0 68 1351.0 69 812.0 70 453.0 71 303.5 72 240.0 73 192.5 74 149.0 75 112.0 76 84.0 77 50.5 78 35.0 79 25.0 80 16.5 81 13.0 82 10.5 83 7.0 84 7.5 85 6.5 86 6.0 87 4.5 88 1.0 89 2.5 90 5.0 91 4.0 92 1.5 93 1.5 94 3.5 95 5.5 96 5.5 97 4.0 98 2.0 99 2.0 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1500367898429889 2 0.0 3 1.3701989939998987E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03555666389429737 16-17 0.07186693723529468 18-19 0.02630782068479805 20-21 0.040763420071496984 22-23 0.06474190246649522 24-25 0.01664791777709877 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.022128713753098363 38-39 0.00445314673049967 40-41 0.006508445221499519 42-43 0.004110596981999696 44-45 0.012468810845399077 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.016442387927998785 60-61 0.01747003717349871 62-63 0.029390768421297824 64-65 0.04638123594689657 66-67 0.01794960682139867 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.016579407827398772 80-81 0.05679474830129579 82-83 0.048847594136096385 84-85 0.030623947515897736 86-87 0.05878153684259565 88-89 0.03288477585599757 90-91 0.0 92-93 0.0031514576861997666 94-95 0.0 96-97 0.0 98-99 0.001096159195199919 100-101 0.04549060660079663 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 729821.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.83317443291344 #Duplication Level Percentage of deduplicated Percentage of total 1 67.43256192357437 24.83755315789252 2 14.559673840132636 10.72558012479864 3 6.278195773921339 6.9373764019447375 4 3.3294175949410296 4.905320761378962 5 2.029608929631948 3.7378469867866135 6 1.273937047892567 2.815388730094663 7 0.9159221348706836 2.3615423832460842 8 0.6590553415880536 1.9420080286124901 9 0.5091597139871961 1.6878571703552436 >10 2.5895886032211832 17.159105969764187 >50 0.21900447216013932 5.654303512999901 >100 0.18950127395826358 13.37054323305745 >500 0.012860365897367164 3.032857722626105 >1k 0.0015129842232196665 0.8327158164424746 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2128 0.2915783459231784 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1416 0.19402017755038564 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1377 0.18867640147378603 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1056 0.1446930137663893 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 951 0.13030592432939037 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 946 0.1296208248323904 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 899 0.1231808895605909 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 879 0.1204404915725911 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 828 0.11345247670319161 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 813 0.11139717821219176 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 783 0.10728658123019207 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 775 0.10619042203499215 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 761 0.10427214344339228 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 742 0.10166876535479248 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.110596981999696E-4 0.0 10-11 0.0 0.0 0.0 5.480795975999595E-4 0.0 12-13 0.0 0.0 0.0 5.480795975999595E-4 0.0 14-15 0.0 0.0 0.0 8.221193963999392E-4 0.0 16-17 0.0 0.0 0.0 8.906293460999341E-4 0.0 18-19 0.0 0.0 0.0 0.001096159195199919 0.0 20-21 0.0 0.0 0.0 0.0014387089436998935 0.0 22-23 0.0 0.0 0.0 0.002808907937699792 6.850994969999493E-5 24-25 0.0 0.0 0.0 0.005343776076599605 1.3701989939998987E-4 26-27 0.0 0.0 0.0 0.012126261096899103 1.3701989939998987E-4 28-29 0.0 0.0 0.0 0.02363593264649825 1.3701989939998987E-4 30-31 0.0 0.0 0.0 0.05220458167139613 1.3701989939998987E-4 32-33 0.0 0.0 0.0 0.10756062102899204 1.3701989939998987E-4 34-35 0.0 0.0 0.0 0.1782628891193868 1.3701989939998987E-4 36-37 0.0 0.0 0.0 0.28445331115437894 1.3701989939998987E-4 38-39 0.0 0.0 0.0 0.44168364571586727 2.7403979879997973E-4 40-41 0.0 0.0 0.0 0.6137121294125546 4.110596981999696E-4 42-43 0.0 0.0 0.0 0.7817670360266422 4.7956964789996453E-4 44-45 0.0 0.0 0.0 0.9753076439291277 5.480795975999595E-4 46-47 0.0 0.0 0.0 1.1997462391463112 5.480795975999595E-4 48-49 0.0 0.0 0.0 1.4265826826029944 5.480795975999595E-4 50-51 0.0 0.0 0.0 1.6500621385243779 5.480795975999595E-4 52-53 0.0 0.0 0.0 1.8706641765583616 6.850994969999493E-4 54-55 0.0 0.0 0.0 2.0874296574091455 8.221193963999392E-4 56-57 0.0 0.0 0.0 2.3382445832608267 8.221193963999392E-4 58-59 0.0 0.0 0.0 2.6076257054812073 9.591392957999291E-4 60-61 0.0 0.0 0.0 2.8827616634763866 0.001096159195199919 62-63 0.0 0.0 0.0 3.172764280556465 0.001096159195199919 64-65 0.0 0.0 0.0 3.4635890170329438 0.001096159195199919 66-67 0.0 0.0 0.0 3.8027132680479188 0.001096159195199919 68-69 0.0 0.0 0.0 4.18760216546249 0.001096159195199919 70-71 0.0 0.0 0.0 4.576122090211161 0.0015072188933998884 72-73 0.0 0.0 0.0 4.985880099366831 0.0015072188933998884 74-75 0.0 0.0 0.0 5.3915960214902015 0.0015072188933998884 76-77 0.0 0.0 0.0 5.80765694601827 0.0015072188933998884 78-79 0.0 0.0 0.0 6.272017385084836 0.0015072188933998884 80-81 0.0 0.0 0.0 6.783581179494698 0.0016442387927998784 82-83 0.0 0.0 0.0 7.304051267365559 0.0019182785915998581 84-85 0.0 0.0 0.0 7.83287956909982 0.0019182785915998581 86-87 0.0 0.0 0.0 8.38150724629738 0.0019182785915998581 88-89 0.0 0.0 0.0 8.973090661956835 0.0019182785915998581 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 615 0.0 46.400654 1 GTATCAA 1185 0.0 46.155926 1 AAACCGT 100 3.039895E-8 37.983368 6 ATCAACG 1490 0.0 36.32637 3 TCAACGC 1570 0.0 34.777763 4 CCGTGCG 115 1.03325874E-7 33.05166 9 TAGGGTA 115 1.0394979E-7 33.029015 4 TCGCACC 790 0.0 31.305756 1 ACCGTGC 140 1.7102138E-8 30.524437 8 AAGGACG 80 4.5035844E-4 29.674503 5 TATCAAC 1880 0.0 29.04313 2 CCTCGTC 115 3.873147E-6 28.902369 8 CGCAGAG 1945 0.0 28.562714 8 ATACCGT 150 3.3473043E-8 28.487524 6 CGCACCA 885 0.0 27.897385 2 ACGCAGA 2015 0.0 27.332945 7 CGGTCTA 65 1.0057596E-5 25.565727 28-29 CTATTAA 335 0.0 25.554985 1 CTGTGCG 935 0.0 25.407358 9 AAATGCG 170 1.1264092E-7 25.136051 6 >>END_MODULE