##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224537_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 729821 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.163964862617 34.0 33.0 34.0 31.0 34.0 2 33.29733044129999 34.0 33.0 34.0 31.0 34.0 3 33.42368608192968 34.0 34.0 34.0 31.0 34.0 4 36.62521357976819 37.0 37.0 37.0 35.0 37.0 5 36.6593068711369 37.0 37.0 37.0 35.0 37.0 6 36.70569632827775 37.0 37.0 37.0 36.0 37.0 7 36.69363994732955 37.0 37.0 37.0 36.0 37.0 8 36.683477181391055 37.0 37.0 37.0 36.0 37.0 9 38.5467916105456 39.0 39.0 39.0 38.0 39.0 10-11 38.572166325715486 39.0 39.0 39.0 37.5 39.0 12-13 38.561906960747905 39.0 39.0 39.0 38.0 39.0 14-15 40.171909961483706 41.0 40.0 41.0 38.0 41.0 16-17 40.18160617466475 41.0 40.0 41.0 38.0 41.0 18-19 40.18295924617132 41.0 40.0 41.0 38.5 41.0 20-21 40.19014731009385 41.0 40.0 41.0 39.0 41.0 22-23 40.117775454529266 41.0 40.0 41.0 38.0 41.0 24-25 40.08359858102192 41.0 40.0 41.0 38.0 41.0 26-27 40.0250075018395 41.0 40.0 41.0 38.0 41.0 28-29 40.01050737098549 41.0 40.0 41.0 38.0 41.0 30-31 39.94547224593428 41.0 40.0 41.0 38.0 41.0 32-33 39.92070110342125 41.0 40.0 41.0 38.0 41.0 34-35 39.85021875226939 41.0 40.0 41.0 38.0 41.0 36-37 39.740593926455944 41.0 40.0 41.0 37.0 41.0 38-39 39.63547294473577 41.0 40.0 41.0 37.0 41.0 40-41 39.528492602980734 41.0 40.0 41.0 37.0 41.0 42-43 39.46161044968561 41.0 39.0 41.0 36.0 41.0 44-45 39.25057377082874 41.0 39.0 41.0 35.0 41.0 46-47 39.058935684229425 41.0 39.0 41.0 35.0 41.0 48-49 38.98204011668615 41.0 39.0 41.0 35.0 41.0 50-51 38.823225832087594 40.0 38.0 41.0 35.0 41.0 52-53 38.5998155712154 40.0 37.5 41.0 35.0 41.0 54-55 38.42935528026736 40.0 37.0 41.0 35.0 41.0 56-57 38.20849084912602 40.0 36.5 41.0 35.0 41.0 58-59 37.95941128030024 40.0 35.5 41.0 34.5 41.0 60-61 37.73249879079939 39.5 35.0 41.0 34.0 41.0 62-63 37.521638867612744 39.0 35.0 41.0 34.0 41.0 64-65 37.28237266398199 39.0 35.0 41.0 34.0 41.0 66-67 36.999205969682976 38.5 35.0 41.0 33.0 41.0 68-69 36.715981041926725 37.5 35.0 41.0 33.0 41.0 70-71 36.370432612928376 37.0 35.0 40.0 33.0 41.0 72-73 36.063020247430536 36.5 35.0 39.5 33.0 41.0 74-75 35.755563350465394 36.0 35.0 39.0 33.0 41.0 76-77 33.88731620493244 34.5 33.0 37.0 29.5 39.0 78-79 35.14296930343194 35.0 35.0 38.0 32.5 39.0 80-81 35.01108079926448 35.0 35.0 37.0 33.0 39.0 82-83 34.764354547210885 35.0 35.0 37.0 33.0 39.0 84-85 34.51667395155799 35.0 35.0 36.5 33.0 38.0 86-87 34.27970899713766 35.0 35.0 36.0 32.5 37.0 88-89 34.10065139260175 35.0 35.0 36.0 32.0 37.0 90-91 33.92047502058724 35.0 35.0 35.5 32.0 36.5 92-93 33.80428625649303 35.0 35.0 35.0 32.0 36.0 94-95 33.68522281490941 35.0 35.0 35.0 32.0 36.0 96-97 33.616546386031644 35.0 35.0 35.0 32.0 36.0 98-99 33.571727862037406 35.0 34.0 35.0 31.5 36.0 100-101 32.7609276795269 34.5 33.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 9.0 15 24.0 16 88.0 17 132.0 18 244.0 19 401.0 20 549.0 21 715.0 22 1083.0 23 1226.0 24 1452.0 25 2232.0 26 3227.0 27 5049.0 28 7317.0 29 6825.0 30 5022.0 31 5161.0 32 6005.0 33 8150.0 34 13680.0 35 29973.0 36 84714.0 37 169444.0 38 252159.0 39 124844.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.89170398741122 20.388071496129335 14.054444002362462 23.665780514096983 2 14.8481613984799 21.48883082290041 40.45361807895361 23.209389699666083 3 19.22622122410838 27.906568870997134 29.583966479451814 23.283243425442677 4 12.991267721811239 18.596203726667223 39.398838893372485 29.013689658149055 5 13.007436069940436 38.52629617399335 35.56036343158117 12.905904324485046 6 27.30217409474378 37.7826891799496 20.81989967402966 14.095237051276957 7 25.497622019645917 31.47360791207707 23.759524595757043 19.269245472519973 8 23.812003217227236 35.89661026470875 22.446051840108737 17.84533467795528 9 26.196560526485264 16.08545109006181 20.720697266864065 36.99729111658886 10-11 25.026547605508746 25.988358789346975 28.69600902139018 20.2890845837541 12-13 25.726787801392398 23.703414946952748 28.651888613783377 21.917908637871477 14-15 22.84128573992801 25.80852017138449 25.577710150845206 25.772483937842296 16-17 22.480649364707237 28.755955227377672 26.943044938416406 21.82035046949869 18-19 22.460096379797235 27.822849712463743 27.55442772953916 22.162626178199858 20-21 23.01225446705366 26.657422321120887 27.414531480901683 22.91579173092377 22-23 23.695264194570523 27.174651023379294 26.76221632268562 22.367868459364562 24-25 23.46960237374087 27.16415108687982 26.795223743985662 22.57102279539365 26-27 22.855868545887535 28.261825745472084 27.2388826619677 21.643423046672677 28-29 22.676256469211552 27.534211287155575 27.609574090542242 22.179958153090627 30-31 22.410877855012174 27.299390391785295 27.855902813460435 22.4338289397421 32-33 22.84667647274429 27.38540145885387 28.09975617258788 21.668165895813964 34-35 23.49677955964135 26.884322440039384 27.49497630487612 22.12392169544315 36-37 21.994186130159157 27.307580845059615 27.890269544050373 22.80796348073085 38-39 22.39138090024814 26.947498085146904 27.481944202756566 23.179176811848386 40-41 22.27868203299165 26.858503660486612 28.399977528736496 22.46283677778524 42-43 22.736671046736117 27.0356703904108 28.3492801659585 21.878378396894583 44-45 22.628838996475494 26.55005563564409 28.26249609454223 22.55860927333819 46-47 23.096752961825363 25.90603060552874 27.635613207547173 23.36160322509873 48-49 22.25742140131403 26.288100409007765 27.927625494132073 23.526852695546133 50-51 22.233122916441157 26.58549151093213 27.927669935504735 23.25371563712198 52-53 22.34253330611205 26.79102136003212 27.85409024952694 23.0123550843289 54-55 22.667270467690024 26.268975543318156 27.663221529662753 23.400532459329067 56-57 22.95971431821016 26.50072694833802 27.161763476635564 23.377795256816253 58-59 22.440998577866115 27.179959906104894 27.741548583863064 22.637492932165927 60-61 22.537953417675023 27.845435550289434 26.89705411715687 22.719556914878673 62-63 21.88413323266938 27.695078656273253 27.46015803875197 22.960630072305403 64-65 22.40241100214984 27.483862481348165 26.894950953727008 23.218775562774983 66-67 22.17262863085606 27.711658064100646 26.679418651970828 23.436294653072466 68-69 22.41577044234134 27.513184739819764 27.441934392131767 22.629110425707125 70-71 22.933637152123605 27.29813200771148 27.115415971861594 22.652814868303324 72-73 22.399602094212142 27.093766827756394 27.55908640611876 22.947544671912702 74-75 22.55553073972933 26.949895933386404 27.375753780721574 23.11881954616269 76-77 22.556224595567254 26.404441652273817 27.242663758180974 23.796669993977954 78-79 22.776740910050126 26.209503920456257 27.027304792521395 23.98645037697222 80-81 22.261008857512444 27.10550908772007 26.969234395211682 23.66424765955581 82-83 21.976810625129314 27.062400574390566 27.531696301949665 23.429092498530455 84-85 22.649328761351452 26.169161045892235 27.605019131757345 23.57649106099896 86-87 22.058628074555266 27.14275144179189 27.181802113120888 23.616818370531952 88-89 22.683986895416822 26.327071980663753 26.51437818314354 24.47456294077589 90-91 22.736876576585217 26.350707913310252 26.72778667645902 24.18462883364551 92-93 22.461466578791235 26.51889983982374 27.343485594412876 23.676147986972147 94-95 22.509355033631532 26.09509729097957 27.230101627659387 24.16544604772951 96-97 22.9403511271942 26.434153032044843 27.102262061519195 23.52323377924176 98-99 21.50328642228711 26.75923274337132 27.593341380968756 24.144139453372812 100-101 22.300908009611398 26.352776644717675 27.149247438617657 24.19706790705327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 1.5 2 1.0 3 1.0 4 0.5 5 1.0 6 1.5 7 2.5 8 10.0 9 15.5 10 16.5 11 12.5 12 9.5 13 13.5 14 15.0 15 17.0 16 21.5 17 23.0 18 26.0 19 32.5 20 33.5 21 41.5 22 55.5 23 62.0 24 73.0 25 104.5 26 135.0 27 165.0 28 206.5 29 261.5 30 443.5 31 942.5 32 2242.5 33 4785.5 34 8535.5 35 14794.0 36 23978.0 37 33110.5 38 38922.0 39 43223.0 40 47481.5 41 46316.5 42 39889.0 43 34473.5 44 30142.0 45 26739.0 46 24173.5 47 21376.0 48 20131.5 49 21170.0 50 22827.5 51 21700.0 52 19626.5 53 20031.5 54 22401.0 55 23136.0 56 19167.0 57 16012.0 58 16028.0 59 16371.5 60 13953.0 61 10125.5 62 8113.5 63 5566.0 64 3074.0 65 1801.0 66 1422.5 67 1406.0 68 1072.5 69 601.0 70 327.5 71 215.0 72 152.5 73 133.0 74 118.0 75 79.5 76 52.5 77 35.5 78 24.5 79 7.5 80 2.0 81 2.5 82 1.5 83 0.5 84 0.5 85 1.0 86 0.5 87 0.5 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4740888519239649 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 7.536094466999443E-4 22-23 0.0011646691448999138 24-25 3.4254974849997466E-4 26-27 0.002055298490999848 28-29 0.002466358189199818 30-31 0.001096159195199919 32-33 2.0552984909998477E-4 34-35 0.004042087032299701 36-37 0.0019867885412998528 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.01000245265619926 46-47 0.07412776557539451 48-49 8.221193963999391E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.007947154165199411 58-59 0.03884514147989713 60-61 0.028705668924297878 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 3.4254974849997466E-4 78-79 0.008084174064599402 80-81 0.006165895472999543 82-83 5.480795975999595E-4 84-85 0.0018497686418998632 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06556402186289514 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 729821.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.68846760339286 #Duplication Level Percentage of deduplicated Percentage of total 1 64.34727122797646 21.677609621304185 2 15.88677958433076 10.704025186979397 3 6.797868860352013 6.870293546222459 4 3.6253491249025327 4.885298261810704 5 2.200723899879866 3.7069507902557626 6 1.490321964488088 3.0123997931569053 7 1.0250210109904634 2.417197098508445 8 0.7452677957227481 2.0085543993646247 9 0.532373187778319 1.6141353200446393 >10 2.859752341421147 17.335899147679296 >50 0.24586072142908613 5.832266128918672 >100 0.2250319877204465 14.506093693457666 >500 0.014702634406417555 3.2499164316026627 >1k 0.0032672520903150124 1.4750583829309574 >5k 4.0840651128937655E-4 0.7043021977636014 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT 5119 0.7014048650285482 No Hit ATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTT 2235 0.30623947515897737 TruSeq Adapter, Index 3 (95% over 21bp) TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1677 0.22978237129378298 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1297 0.17771480952178684 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1172 0.1605873220967881 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1145 0.15688778481298837 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1104 0.15126996893758882 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1054 0.1444189739675893 No Hit TCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTCTGCTTG 1037 0.14208963567778948 TruSeq Adapter, Index 3 (96% over 28bp) GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 999 0.13688287950058986 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 957 0.1311280437257903 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 949 0.1300318845305904 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 902 0.12359194925879087 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 864 0.11838519308159125 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 844 0.11564479509359143 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 843 0.11550777519419146 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 826 0.11317843690439164 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 811 0.11112313841339176 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 806 0.11043803891639181 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.110596981999696E-4 1.3701989939998987E-4 10-11 0.0 0.0 0.0 5.480795975999595E-4 1.3701989939998987E-4 12-13 0.0 0.0 0.0 6.165895472999543E-4 1.3701989939998987E-4 14-15 0.0 0.0 0.0 9.591392957999291E-4 2.055298490999848E-4 16-17 0.0 0.0 0.0 9.591392957999291E-4 2.7403979879997973E-4 18-19 0.0 0.0 0.0 0.001096159195199919 2.7403979879997973E-4 20-21 0.0 0.0 0.0 0.0014387089436998935 2.7403979879997973E-4 22-23 0.0 0.0 0.0 0.0026718880382998024 3.4254974849997466E-4 24-25 0.0 0.0 0.0 0.00513824622749962 4.110596981999696E-4 26-27 0.0 0.0 0.0 0.012194771046599098 4.110596981999696E-4 28-29 0.0 0.0 0.0 0.023841462495598237 4.110596981999696E-4 30-31 0.0 0.0 0.0 0.0526841513192961 4.110596981999696E-4 32-33 0.0 0.0 0.0 0.10865678022419195 4.110596981999696E-4 34-35 0.0 0.0 0.0 0.17881096871698676 5.480795975999595E-4 36-37 0.0 0.0 0.0 0.28534394050047884 5.480795975999595E-4 38-39 0.0 0.0 0.0 0.4418891755649673 5.480795975999595E-4 40-41 0.0 0.0 0.0 0.6150823284065545 5.480795975999595E-4 42-43 0.0 0.0 0.0 0.783890844467342 5.480795975999595E-4 44-45 0.0 0.0 0.0 0.9786646314644276 6.850994969999493E-4 46-47 0.0 0.0 0.0 1.2054325649714106 8.221193963999392E-4 48-49 0.0 0.0 0.0 1.433091127824494 8.221193963999392E-4 50-51 0.0 0.0 0.0 1.6593109817338774 8.221193963999392E-4 52-53 0.0 0.0 0.0 1.8828589476049606 8.221193963999392E-4 54-55 0.0 0.0 0.0 2.100309527952745 8.221193963999392E-4 56-57 0.0 0.0 0.0 2.3520150831505258 8.221193963999392E-4 58-59 0.0 0.0 0.0 2.623999583459506 8.221193963999392E-4 60-61 0.0 0.0 0.0 2.9024240190402852 8.221193963999392E-4 62-63 0.0 0.0 0.0 3.1958521336053636 8.221193963999392E-4 64-65 0.0 0.0 0.0 3.4918151163093416 8.221193963999392E-4 66-67 0.0 0.0 0.0 3.834227844909916 8.906293460999341E-4 68-69 0.0 0.0 0.0 4.222542239809488 9.591392957999291E-4 70-71 0.0 0.0 0.0 4.616268920735358 0.001096159195199919 72-73 0.0 0.0 0.0 5.034248123855027 0.0012331790945999087 74-75 0.0 0.0 0.0 5.444691232507697 0.0012331790945999087 76-77 0.0 0.0 0.0 5.865136793816566 0.0012331790945999087 78-79 0.0 0.0 0.0 6.336690777601631 0.0012331790945999087 80-81 0.0 0.0 0.0 6.856886825673692 0.0012331790945999087 82-83 0.0 0.0 0.0 7.382974729419954 0.0012331790945999087 84-85 0.0 0.0 0.0 7.920435284816414 0.0012331790945999087 86-87 0.0 0.0 0.0 8.475776937084573 0.0012331790945999087 88-89 0.0 0.0 0.0 9.073594758166728 0.0012331790945999087 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 725 0.0 48.725067 1 GTATCAA 1210 0.0 42.21406 1 CCGTGCG 80 1.07880605E-5 35.616627 9 AGCCGTA 30 0.0039558485 31.659224 62-63 GACCGTG 60 0.0039545638 31.659224 7 ATCAACG 1615 0.0 31.169142 3 TCAACGC 1650 0.0 30.507977 4 ACCGTGC 95 3.4947207E-5 29.992947 8 TCGCACC 710 0.0 28.91138 1 CGCACCA 735 0.0 27.782583 2 CCTCGTC 125 7.3995634E-6 26.593746 8 CGCAGAG 1895 0.0 26.563673 8 TAGTCGT 45 8.914501E-4 26.406204 42-43 AAACCGT 90 8.95669E-4 26.382687 6 CCTATCC 90 8.95669E-4 26.382687 3 TATCAAC 1970 0.0 25.793425 2 CTCGTCC 130 1.0032822E-5 25.57091 9 GTCTAGT 130 1.0032822E-5 25.57091 9 AATGCGG 130 1.0032822E-5 25.57091 7 GCGAATT 75 1.0626154E-6 25.327377 14-15 >>END_MODULE