##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224534_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 920483 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.189929634767836 34.0 31.0 34.0 31.0 34.0 2 32.35418796436219 34.0 31.0 34.0 31.0 34.0 3 32.49726719559188 34.0 31.0 34.0 31.0 34.0 4 35.78153969166188 37.0 37.0 37.0 35.0 37.0 5 35.789446410199865 37.0 37.0 37.0 35.0 37.0 6 35.88528739802908 37.0 37.0 37.0 35.0 37.0 7 35.84799936555048 37.0 37.0 37.0 35.0 37.0 8 35.88757424091482 37.0 37.0 37.0 35.0 37.0 9 37.61403198103604 39.0 39.0 39.0 35.0 39.0 10-11 37.68199358380329 39.0 39.0 39.0 35.0 39.0 12-13 37.666897161598854 39.0 39.0 39.0 35.0 39.0 14-15 39.14589731695208 41.0 40.0 41.0 36.0 41.0 16-17 38.97495445325987 41.0 39.5 41.0 35.5 41.0 18-19 39.05725852623025 41.0 39.5 41.0 36.0 41.0 20-21 39.11289562110327 41.0 40.0 41.0 36.0 41.0 22-23 39.05830688888334 41.0 40.0 41.0 36.0 41.0 24-25 38.97920167998757 41.0 39.0 41.0 35.0 41.0 26-27 38.796767566592756 41.0 39.0 41.0 35.0 41.0 28-29 38.717529818584374 41.0 39.0 41.0 35.0 41.0 30-31 38.63931924869878 41.0 39.0 41.0 35.0 41.0 32-33 38.43359138626134 40.0 38.5 41.0 34.0 41.0 34-35 38.417938734338385 40.0 38.0 41.0 34.0 41.0 36-37 38.39405344802674 40.0 38.0 41.0 34.5 41.0 38-39 38.252056800614454 40.0 38.0 41.0 34.0 41.0 40-41 38.12913763752291 40.0 38.0 41.0 34.0 41.0 42-43 37.93834215297838 40.0 37.5 41.0 33.0 41.0 44-45 37.71340372391451 40.0 37.0 41.0 33.0 41.0 46-47 37.483724848802204 40.0 36.5 41.0 32.5 41.0 48-49 37.225103016568475 40.0 36.0 41.0 32.0 41.0 50-51 35.87821285129655 38.0 34.0 40.0 29.5 40.5 52-53 36.16730129725373 38.5 35.0 40.0 30.5 40.5 54-55 36.5280428861804 39.0 35.0 41.0 31.0 41.0 56-57 36.30358898534791 38.0 35.0 41.0 31.0 41.0 58-59 36.09419239681776 37.0 35.0 41.0 31.0 41.0 60-61 35.78701779391906 37.0 35.0 40.0 30.5 41.0 62-63 35.474008754099756 36.0 35.0 40.0 30.0 41.0 64-65 35.19713672061299 35.5 35.0 39.5 30.0 41.0 66-67 34.9439766948439 35.0 35.0 39.0 29.5 41.0 68-69 34.64330465635976 35.0 34.0 39.0 29.0 41.0 70-71 34.37375921119673 35.0 34.0 37.5 29.0 40.5 72-73 34.080282308309876 35.0 34.0 37.0 29.0 40.0 74-75 33.84123009333143 35.0 34.0 36.5 29.0 39.0 76-77 33.567968664277345 35.0 34.0 36.0 28.0 39.0 78-79 33.39492961847204 35.0 34.0 36.0 28.0 38.0 80-81 33.15641570784034 35.0 34.0 35.0 27.0 37.0 82-83 32.94743846437142 35.0 34.0 35.0 27.0 37.0 84-85 32.77316745665047 35.0 33.0 35.0 27.0 36.0 86-87 32.603226241006084 35.0 33.0 35.0 26.5 36.0 88-89 32.48826974534022 35.0 33.0 35.0 26.0 36.0 90-91 32.34715307072483 35.0 33.0 35.0 25.5 35.5 92-93 32.24193602706406 35.0 33.0 35.0 25.0 35.0 94-95 32.12186156615603 35.0 33.0 35.0 25.0 35.0 96-97 31.99791087939701 35.0 33.0 35.0 25.0 35.0 98-99 31.96343278474453 35.0 33.0 35.0 25.0 35.0 100-101 30.672792436144938 34.0 30.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 9.0 7 268.0 8 804.0 9 497.0 10 503.0 11 950.0 12 1489.0 13 1829.0 14 1870.0 15 1963.0 16 2137.0 17 2374.0 18 2532.0 19 3072.0 20 3574.0 21 4755.0 22 5725.0 23 5421.0 24 5172.0 25 5582.0 26 5676.0 27 6019.0 28 6603.0 29 7761.0 30 9560.0 31 12168.0 32 16424.0 33 23507.0 34 40306.0 35 74685.0 36 164224.0 37 259052.0 38 199499.0 39 44463.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.36342668146311 18.188306460386883 12.931327110124682 24.51693974802533 2 16.854539252261315 19.19385713137248 37.25635047724996 26.695253139116243 3 20.494633234834 25.720493655484095 27.44546323657222 26.33940987310968 4 13.481291886976729 16.11002050010701 37.50020369740669 32.90848391550957 5 14.254690200688117 38.85862096312479 32.91326401465318 13.97342482153391 6 30.464223673875562 36.21316200299191 18.862597136503336 14.460017186629193 7 27.857114145508387 30.522453972533985 21.58508087601835 20.035351005939273 8 27.23754811332746 32.93357943601348 19.99841387619326 19.830458574465798 9 27.77259330156016 14.671319296499771 19.22316870599457 38.3329186959455 10-11 27.409034170104174 23.791965739725775 26.355945737183628 22.443054352986422 12-13 27.595458036704645 21.76303093050062 26.653235312330594 23.98827572046415 14-15 24.79344276904334 23.505329869384646 23.851416815511044 27.849810546060972 16-17 24.614685467120314 26.105987113509943 25.04461565306825 24.234711766301498 18-19 24.61021461559359 25.71692474870959 25.493507199130672 24.17935343656615 20-21 25.996418896705002 23.58050553875498 25.23161695780113 25.191458606738887 22-23 26.084924095128812 24.859314130226224 24.29499433886474 24.760767435780224 24-25 25.06012837891065 24.663310958930158 25.009711269690786 25.266849392468398 26-27 24.844728256795616 25.670164468002127 25.409105871591326 24.07600140361093 28-29 24.56465790242731 25.821552380652328 25.363151736642607 24.250637980277745 30-31 24.632665676606738 24.551621268399305 25.70927437008614 25.10643868490782 32-33 24.618596975718184 25.020614177556784 25.78662506531897 24.574163781406067 34-35 25.427574436464333 24.17801306488007 25.265376981432574 25.129035517223024 36-37 24.376680883431582 24.38765586373638 26.39520795414414 24.840455298687893 38-39 24.562952162939993 24.97579953869738 24.90241048545419 25.558837812908436 40-41 25.424202982947136 24.425813096459052 25.545015818659067 24.604968101934745 42-43 25.161863674363804 24.879664903218586 25.5880136954676 24.370457726950008 44-45 25.149163851254997 24.27767646098543 25.223969868983538 25.34918981877604 46-47 25.0665683125055 24.2625339088283 25.090849043382658 25.58004873528354 48-49 24.535651391715003 24.781609220376694 25.4738001679553 25.208939219953002 50-51 24.572479882844114 25.217467351379657 24.945816489821105 25.26423627595512 52-53 25.134684725301824 25.07862719898141 24.099358706244438 25.687329369472334 54-55 25.085797347696808 24.15471008155501 24.8039887754581 25.95550379529008 56-57 24.98965217174027 24.898395733544238 24.72164070384787 25.39031139086762 58-59 25.44858421887563 25.092683138839995 25.070028467740187 24.38870417454419 60-61 25.10757034448588 25.295112177397623 24.589059552681217 25.008257925435277 62-63 24.685424724165923 24.70944100742331 25.418627724788607 25.186506543622155 64-65 25.787763806178205 24.055830120614193 24.537004329154897 25.619401744052713 66-67 24.649037406310374 24.776763885840452 24.175237904829373 26.3989608030198 68-69 24.786986831913246 24.952008890984406 25.626817659859007 24.63418661724334 70-71 25.4692373460455 24.15031021757056 25.17053546887884 25.2099169675051 72-73 25.019690749313135 24.599530898452226 25.466467061314553 24.914311290920093 74-75 24.949510202795704 24.44499246591192 25.540124043572774 25.0653732877196 76-77 24.971672480643313 23.872412635540254 24.76732324225434 26.388591641562094 78-79 25.05628440357004 23.336133065891868 25.505310074908238 26.102272455629855 80-81 24.8332645792604 24.938759959149753 24.651514682119757 25.57646077947009 82-83 24.480366251713274 25.268444375847128 25.09551391649991 25.15567545593969 84-85 24.692204580784786 24.196395727730575 25.768422219408865 25.342977472075773 86-87 24.81603289803013 25.530921528567013 24.753093566002324 24.899952007400536 88-89 25.051946922851215 24.542095482356522 24.448634491452665 25.957323103339604 90-91 24.56232217216396 24.34325240118503 24.975094597075664 26.119330829575343 92-93 24.55676812011451 24.559647131038453 25.469468903965975 25.414115844881064 94-95 24.98389432504457 24.083823384027735 25.51785312710827 25.41442916381943 96-97 25.25521927075242 24.98144995616432 25.149242299966428 24.61408847311683 98-99 23.87498669169714 25.368884427438786 25.287405022173264 25.46872385869081 100-101 24.866869154891535 24.487706421420057 24.717801736529452 25.92762268715895 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 2.0 2 2.5 3 4.0 4 4.5 5 4.0 6 6.5 7 15.0 8 30.0 9 32.5 10 26.5 11 30.0 12 46.0 13 53.5 14 59.5 15 65.0 16 68.0 17 79.0 18 87.5 19 103.0 20 123.0 21 147.5 22 175.0 23 247.0 24 336.5 25 457.5 26 660.5 27 901.0 28 1171.0 29 1576.0 30 2402.0 31 3650.0 32 5197.5 33 6933.0 34 8642.0 35 10537.5 36 12958.0 37 14909.0 38 15880.0 39 16775.0 40 17488.0 41 17960.0 42 18755.0 43 19944.0 44 21656.0 45 25303.0 46 30092.5 47 31766.0 48 34278.5 49 40407.5 50 47018.0 51 48477.0 52 46968.5 53 48239.0 54 51737.5 55 52414.0 56 44435.0 57 37645.0 58 36021.0 59 34323.5 60 29028.5 61 22340.5 62 18342.0 63 13315.0 64 8016.0 65 5159.0 66 3925.5 67 3389.5 68 2586.0 69 1673.5 70 1042.5 71 652.0 72 438.5 73 302.0 74 216.5 75 176.0 76 140.5 77 94.0 78 61.5 79 40.5 80 34.0 81 28.5 82 21.5 83 16.5 84 14.0 85 14.0 86 12.0 87 8.0 88 9.0 89 9.0 90 7.5 91 6.0 92 5.0 93 6.0 94 3.5 95 3.0 96 4.5 97 5.5 98 4.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1459016624967544 2 1.0863861690004053E-4 3 3.2591585070012154E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03677417182066372 16-17 0.07414585603427766 18-19 0.025312797737709444 20-21 0.04079380064596522 22-23 0.0667584300850749 24-25 0.017436498012456503 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.022596832315208426 38-39 0.004997376377401864 40-41 0.0055405694619020665 42-43 0.0035307550492513174 44-45 0.011135458232254154 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.015535322216705795 60-61 0.01683898561950628 62-63 0.029766981030611102 64-65 0.04801826866981791 66-67 0.017056262853306362 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017056262853306362 80-81 0.058393256583771785 82-83 0.04997376377401864 84-85 0.029278107254560922 86-87 0.05969691998657226 88-89 0.034003887089712685 90-91 0.0 92-93 0.0030418812732011346 94-95 0.0 96-97 0.0 98-99 5.431930845002026E-4 100-101 0.04666028595856741 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 920483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.782180459507295 #Duplication Level Percentage of deduplicated Percentage of total 1 73.16612990037252 32.03372702821862 2 14.716521446452088 12.886427954095495 3 5.252900511574893 6.899503144008305 4 2.4059970832351683 4.213591939330013 5 1.2853327475027205 2.8137335150839213 6 0.7447236868750534 1.9563376110739914 7 0.47187135778084377 1.4461689858023543 8 0.3268232296906225 1.1447226896539069 9 0.22936841103494843 0.90380242472783 >10 1.1190577179891625 8.982478174135625 >50 0.11929074671717366 3.7342474661404066 >100 0.13737176580691027 13.052754295786789 >500 0.01808184120091258 5.392320710093871 >1k 0.006529553766996211 4.540184061848947 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3403 0.36969721331083794 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2695 0.2927810725456092 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2396 0.2602981260924971 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1999 0.217168595183181 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1889 0.20521834732417657 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1771 0.19239899052997175 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1716 0.18642386660046956 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1686 0.18316470809346833 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1686 0.18316470809346833 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1630 0.17708094554706605 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1604 0.174256341507665 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1536 0.16686891555846223 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1515 0.1645875046035614 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1492 0.16208881641486048 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1457 0.15828646482335904 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1450 0.15752599450505875 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1390 0.1510076774910563 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 1248 0.13558099389125058 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 1226 0.13319094431944967 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1201 0.13047497889694867 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 1075 0.11678651316754357 No Hit CTTCGAGGCAATCCGTGGCGGAAAAACACAAATGTGCACGCTCGCCTAAT 1074 0.11667787455064353 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1073 0.11656923593374349 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1038 0.11276688434224205 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 1021 0.11092002785494136 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 1021 0.11092002785494136 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 971 0.10548809700993934 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 965 0.10483626530853911 No Hit CCTAAATGTTGGGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCAC 928 0.10081663648323762 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 5.431930845002026E-5 0.0 16-17 0.0 0.0 0.0 1.0863861690004052E-4 0.0 18-19 0.0 0.0 0.0 2.715965422501013E-4 0.0 20-21 0.0 0.0 0.0 7.061510098502633E-4 0.0 22-23 0.0 0.0 0.0 8.691089352003241E-4 0.0 24-25 0.0 0.0 0.0 0.0011407054774504254 0.0 26-27 0.0 0.0 0.0 0.0015209406366005673 0.0 28-29 0.0 0.0 0.0 0.001846856487300689 0.0 30-31 0.0 0.0 0.0 0.003910990208401459 0.0 32-33 0.0 0.0 0.0 0.010049072063253749 0.0 34-35 0.0 5.431930845002026E-5 0.0 0.018142649022306768 0.0 36-37 0.0 1.0863861690004052E-4 0.0 0.030473132040461363 0.0 38-39 0.0 1.0863861690004052E-4 0.0 0.0538847539824201 0.0 40-41 0.0 1.0863861690004052E-4 0.0 0.0814789626750304 0.0 42-43 0.0 1.0863861690004052E-4 0.0 0.10499922323388916 0.0 44-45 0.0 1.0863861690004052E-4 0.0 0.13416869187155006 0.0 46-47 0.0 1.0863861690004052E-4 0.0 0.16551093284721174 0.0 48-49 0.0 1.0863861690004052E-4 0.0 0.2032085329115258 0.0 50-51 0.0 1.0863861690004052E-4 0.0 0.24405665286594103 0.0 52-53 0.0 1.0863861690004052E-4 0.0 0.28729482239215715 0.0 54-55 0.0 2.715965422501013E-4 0.0 0.332379848405674 0.0 56-57 0.0 3.259158507001216E-4 0.0 0.38604732515429396 0.0 58-59 0.0 3.259158507001216E-4 0.0 0.43928024743531385 0.0 60-61 0.0 3.259158507001216E-4 0.0 0.5057127616696886 0.0 62-63 0.0 3.259158507001216E-4 0.0 0.5765451398885151 0.0 64-65 0.0 3.259158507001216E-4 0.0 0.6428690155059897 0.0 66-67 0.0 3.259158507001216E-4 0.0 0.72380478509652 0.0 68-69 0.0 3.259158507001216E-4 0.0 0.8221770526995067 0.0 70-71 0.0 3.259158507001216E-4 0.0 0.9287515358784464 0.0 72-73 0.0 3.259158507001216E-4 0.0 1.0440171084093894 0.0 74-75 0.0 3.259158507001216E-4 0.0 1.1592283616318824 0.0 76-77 0.0 3.259158507001216E-4 0.0 1.270528624645974 0.0 78-79 0.0 3.259158507001216E-4 0.0 1.4031220565724734 0.0 80-81 0.0 3.259158507001216E-4 0.0 1.5629837813408831 0.0 82-83 0.0 3.259158507001216E-4 0.0 1.7353932663612475 0.0 84-85 0.0 3.259158507001216E-4 0.0 1.9107903133463626 0.0 86-87 0.0 3.259158507001216E-4 0.0 2.101451086005934 0.0 88-89 0.0 3.259158507001216E-4 0.0 2.307810138807561 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 845 0.0 59.64902 1 GTATCAA 1805 0.0 52.16055 1 AACCGTG 230 0.0 39.225285 7 ATCAACG 2455 0.0 38.296055 3 AAACCGT 225 0.0 37.986595 6 CCGTGCG 260 0.0 36.54741 9 TCAACGC 2575 0.0 36.511387 4 GTCTAAT 505 0.0 35.7805 1 GTATAAG 355 0.0 33.4862 1 ACCGTGC 320 0.0 32.6465 8 ACGCAGA 2955 0.0 32.137558 7 CGCAGAG 2960 0.0 32.085014 8 GCCCATA 1150 0.0 31.424614 1 CATAATA 1215 0.0 30.873877 4 CTAATGT 630 0.0 30.14809 3 GCGTAAG 80 4.5022485E-4 29.677025 7 TATCAAC 3190 0.0 29.621206 2 GGCGTAA 65 0.0058535603 29.220455 6 GTACATG 4545 0.0 29.189356 1 CCCATAA 1205 0.0 29.159834 2 >>END_MODULE