##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224533_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 894882 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.169686059167574 34.0 33.0 34.0 31.0 34.0 2 33.294365067126165 34.0 33.0 34.0 31.0 34.0 3 33.409462923603336 34.0 34.0 34.0 31.0 34.0 4 36.62809174840929 37.0 37.0 37.0 35.0 37.0 5 36.66123801797332 37.0 37.0 37.0 35.0 37.0 6 36.70518682910149 37.0 37.0 37.0 36.0 37.0 7 36.68539427544637 37.0 37.0 37.0 36.0 37.0 8 36.675268918136695 37.0 37.0 37.0 36.0 37.0 9 38.52254822423515 39.0 39.0 39.0 37.0 39.0 10-11 38.55136822508443 39.0 39.0 39.0 37.5 39.0 12-13 38.527378470010575 39.0 39.0 39.0 37.0 39.0 14-15 40.12313131787208 41.0 40.0 41.0 38.0 41.0 16-17 40.13093849244929 41.0 40.0 41.0 38.0 41.0 18-19 40.12662004599489 41.0 40.0 41.0 38.0 41.0 20-21 40.125411506768486 41.0 40.0 41.0 38.0 41.0 22-23 40.05553190253016 41.0 40.0 41.0 38.0 41.0 24-25 40.012473711617844 41.0 40.0 41.0 38.0 41.0 26-27 39.9349405843452 41.0 40.0 41.0 38.0 41.0 28-29 39.91062229433601 41.0 40.0 41.0 38.0 41.0 30-31 39.85698952487591 41.0 40.0 41.0 38.0 41.0 32-33 39.81429674526921 41.0 40.0 41.0 37.0 41.0 34-35 39.73415824656212 41.0 40.0 41.0 37.0 41.0 36-37 39.60841429372811 41.0 40.0 41.0 37.0 41.0 38-39 39.48463037584844 41.0 39.5 41.0 36.0 41.0 40-41 39.3402929101267 41.0 39.0 41.0 35.5 41.0 42-43 39.231484709715915 41.0 39.0 41.0 35.0 41.0 44-45 38.95867332229277 41.0 38.5 41.0 35.0 41.0 46-47 38.71135747506375 40.0 38.0 41.0 35.0 41.0 48-49 38.57556582879083 40.0 37.5 41.0 35.0 41.0 50-51 38.36952860824108 40.0 37.0 41.0 35.0 41.0 52-53 38.08081847662597 40.0 36.5 41.0 35.0 41.0 54-55 37.85906465880417 39.5 35.5 41.0 34.5 41.0 56-57 37.59831687306259 39.0 35.0 41.0 34.0 41.0 58-59 37.30572578284064 39.0 35.0 41.0 34.0 41.0 60-61 37.046597763727505 38.0 35.0 41.0 34.0 41.0 62-63 36.83529951434937 37.0 35.0 41.0 33.5 41.0 64-65 36.58339311775184 37.0 35.0 40.5 33.0 41.0 66-67 36.339704005667784 36.0 35.0 40.0 33.0 41.0 68-69 36.1121700961691 36.0 35.0 40.0 33.0 41.0 70-71 35.85721469422784 35.0 35.0 39.0 33.0 41.0 72-73 35.60085575528394 35.0 35.0 39.0 33.0 41.0 74-75 35.323495723458514 35.0 35.0 38.5 32.0 40.5 76-77 33.51798002418196 34.5 32.0 35.5 29.0 39.0 78-79 34.83347022288972 35.0 34.5 37.0 32.5 39.0 80-81 34.77373888400929 35.0 35.0 36.5 33.0 39.0 82-83 34.58008374288454 35.0 35.0 36.0 33.0 38.0 84-85 34.38639787145121 35.0 35.0 36.0 33.0 37.0 86-87 34.20480521454225 35.0 35.0 35.5 32.0 37.0 88-89 34.076275419552516 35.0 35.0 35.0 32.0 36.0 90-91 33.93326382696266 35.0 35.0 35.0 32.0 36.0 92-93 33.82757670843753 35.0 35.0 35.0 32.0 36.0 94-95 33.734690160266936 35.0 34.0 35.0 32.0 36.0 96-97 33.69373280499552 35.0 34.0 35.0 31.5 35.5 98-99 33.67861405190852 35.0 34.0 35.0 31.0 35.0 100-101 32.83836248801518 34.5 33.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 8.0 15 41.0 16 109.0 17 233.0 18 412.0 19 631.0 20 891.0 21 1343.0 22 1915.0 23 1879.0 24 1836.0 25 2289.0 26 3082.0 27 4277.0 28 5824.0 29 6662.0 30 7071.0 31 7561.0 32 8831.0 33 11831.0 34 21215.0 35 45878.0 36 136942.0 37 260886.0 38 260289.0 39 102939.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.79204068915573 19.771628745137008 13.484570344297175 22.951760221410087 2 16.438815396890316 20.133939446765048 38.46663582461151 24.96060933173312 3 19.87692232048471 27.652584363078038 28.380725056487893 24.089768259949356 4 13.463339300600527 16.688792488842104 38.78868945849844 31.05917875205893 5 13.80159618810078 38.35097811778536 34.289772282826114 13.557653411287745 6 29.37493434888622 36.685954125795355 19.406916219121626 14.532195306196794 7 26.815490757440646 30.972351662006837 23.119472734952765 19.092684845599756 8 26.104447290257266 33.56990083608788 20.683062124391817 19.64258974926303 9 27.023562883151076 15.31699151396497 20.605733493354432 37.05371210952953 10-11 26.607753871460147 24.631627410094293 27.351986071906687 21.408632646538873 12-13 26.811747247123087 23.026108470167017 27.449652579893215 22.712491702816685 14-15 24.088147934588026 25.103253836818705 24.84366653927557 25.964931689317698 16-17 23.312459072816306 27.485411484419174 26.140988420819728 23.061141021944792 18-19 23.332182343593903 26.7413469038376 27.085526359899966 22.84094439266853 20-21 24.778949450453666 25.107487139258073 26.70491784043461 23.40864556985365 22-23 25.18498486652538 25.787641899023377 25.73009167248222 23.297281561969022 24-25 24.728413155067248 25.45879082044007 25.92550170162575 23.887294322866932 26-27 23.8742023242599 26.941702412261954 26.197121243360034 22.986974020118105 28-29 23.515742032598776 26.577597685420844 27.136909614410023 22.769750667570356 30-31 23.753094007542952 25.301578432742005 27.003994971364715 23.941332588350328 32-33 23.66440193098516 26.0087944752369 27.15246736992669 23.174336223851242 34-35 24.528427342413796 25.51127198199925 26.191161326767627 23.76913934881933 36-37 23.42470299923005 25.636214705491234 26.853272512105203 24.085809783173513 38-39 23.646916576710673 25.930513743711465 26.118527358914363 24.30404232066351 40-41 23.821129489698084 25.86916487313411 26.869967213554414 23.43973842361339 42-43 23.860911270983213 26.001416946591842 26.781296304987695 23.35637547743725 44-45 24.180413517491402 25.492198911278468 26.482966794105124 23.844420777125002 46-47 23.920061241870158 25.300743323758233 26.37409768615107 24.405097748220538 48-49 23.304135603220782 25.33028337461468 27.029178919302183 24.336402102862355 50-51 23.7748105336793 25.5445969412727 26.54824881939742 24.132343705650577 52-53 23.91681128552288 25.931492567168146 25.93752688905005 24.21416925825892 54-55 24.218332696377846 25.334289884029403 26.208650972977445 24.238726446615306 56-57 24.41226119837082 25.494394598161723 25.863412927822942 24.22993127564451 58-59 24.419794697230117 25.611366831277792 26.182167780376904 23.78667069111519 60-61 23.981498093304292 26.106165755935123 26.09744687771941 23.814889273041175 62-63 23.57037017170979 25.579573619762158 26.692010790249444 24.15804541827861 64-65 24.251800796082613 25.193489197458437 26.097183762775426 24.457526243683525 66-67 23.62708155935643 25.76222339928616 25.90917014757253 24.701524893784878 68-69 24.1003841847305 25.56672276344814 26.680668512720114 23.652224539101244 70-71 24.688394671029254 25.33423401074108 26.281174501219155 23.696196817010513 72-73 23.787270276975065 25.557224304433433 26.635690515621054 24.01981490297045 74-75 24.021435228331782 25.078781336533755 26.50410892162319 24.395674513511278 76-77 23.750654418448985 24.830577558852962 26.38285532616998 25.03591269652808 78-79 24.02766159913591 24.379186971154358 26.43536733032377 25.15778409938596 80-81 23.241243164200554 25.859563190529595 26.096815091590074 24.80237855367978 82-83 23.04575839727157 25.82257390425915 26.625759604145387 24.505908094323896 84-85 23.613552526152166 24.874533306364466 26.91731323035249 24.594600937130878 86-87 23.112376827335897 26.110537478684343 26.56540191891221 24.21168377506755 88-89 23.84129974678226 24.883224827407414 25.819940506122595 25.455534919687732 90-91 23.686754231284123 25.255173307765716 25.768760574019815 25.289311886930342 92-93 23.71776390630273 25.443410416121903 26.372192087895385 24.466633589679983 94-95 23.648201662342075 24.69448485945633 26.37839402289911 25.278919455302486 96-97 23.91846075795468 25.478722334341285 26.360291077482838 24.24252583022119 98-99 22.280479437512433 25.91364001063827 26.849852829758557 24.956027722090734 100-101 23.21180167285414 25.303260723710697 26.31955316008409 25.165384443351073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 1.5 2 3.5 3 5.0 4 3.0 5 3.0 6 4.5 7 11.5 8 23.0 9 27.5 10 28.5 11 30.5 12 33.5 13 38.5 14 43.0 15 46.0 16 54.0 17 62.5 18 64.0 19 66.5 20 77.5 21 98.5 22 103.5 23 135.0 24 185.5 25 220.5 26 315.5 27 430.0 28 537.0 29 736.5 30 1147.0 31 2107.5 32 4106.0 33 7498.0 34 12489.5 35 19848.5 36 28931.0 37 35922.0 38 37496.0 39 35204.5 40 31726.5 41 27689.5 42 24125.5 43 22292.5 44 21781.0 45 22131.5 46 23399.0 47 25013.5 48 27163.0 49 32290.5 50 38596.0 51 38897.0 52 36737.5 53 38829.5 54 43187.5 55 43429.5 56 35984.5 57 30173.5 58 29537.0 59 29351.0 60 24736.5 61 17970.5 62 14276.5 63 9726.5 64 5382.5 65 3275.0 66 2473.0 67 2210.5 68 1634.5 69 950.0 70 525.5 71 327.0 72 266.5 73 222.5 74 156.5 75 107.0 76 70.0 77 40.0 78 22.0 79 13.5 80 9.0 81 3.5 82 2.0 83 1.5 84 0.5 85 0.5 86 2.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4723527794726009 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 8.38099324827184E-4 22-23 0.001285085631401682 24-25 2.793664416090613E-4 26-27 0.0018438185146198048 28-29 0.003631763740917797 30-31 7.822260365053717E-4 32-33 2.2349315328724906E-4 34-35 0.0034082705876305477 36-37 0.002123184956228866 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.007934006941697342 46-47 0.08073690162501872 48-49 7.263527481835594E-4 50-51 0.0 52-53 1.1174657664362453E-4 54-55 0.0 56-57 0.008436866536593651 58-59 0.03905542853694677 60-61 0.030339195558744057 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 3.9111301825268583E-4 78-79 0.007542893923444655 80-81 0.005866695273790288 82-83 8.939726131489962E-4 84-85 0.002570171262803364 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06727143913946197 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 894882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.234924205609516 #Duplication Level Percentage of deduplicated Percentage of total 1 68.21914866150172 25.401348297822246 2 15.906664158732852 11.845668686290065 3 6.24406202310051 6.97491528495817 4 2.9952023672260544 4.461045324964974 5 1.7021491030621863 3.1689696419583364 6 1.0405908132514075 2.3247792036281836 7 0.7313039493282912 1.9061032987151278 8 0.5118908097054227 1.5248172400743598 9 0.35822530351596493 1.2004642822453577 >10 1.895283507242303 12.835788781028759 >50 0.17831221125884886 4.6870853727436685 >100 0.18975765326898913 14.999396709161775 >500 0.020782981072216173 5.108885968332781 >1k 0.006626457733170376 3.5607319080762507 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2508 0.2802604142222103 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 2153 0.2405903795137236 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1971 0.22025250256458395 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1672 0.1868402761481402 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1670 0.18661678299485296 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1504 0.1680668512720113 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1501 0.1677316115420804 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1486 0.16605541289242604 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1486 0.16605541289242604 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1457 0.16281476216976093 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1400 0.15644520730107433 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1337 0.149405172972526 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1321 0.14761722774622799 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1297 0.144935309906781 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1288 0.14392959071698838 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1207 0.1348781180088548 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 1183 0.1321962001694078 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1128 0.12605013845400848 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1084 0.12113328908168897 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1046 0.11688691916923125 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1042 0.11643993286265676 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 1008 0.11264054925677351 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 1000 0.11174657664362452 No Hit ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 993 0.11096435060711915 No Hit GGTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTC 980 0.10951164511075204 No Hit GGATGGCACTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCT 968 0.10817068619102853 No Hit ACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGC 927 0.10358907654863994 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 924 0.10325383681870906 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 904 0.10101890528583658 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 5.587328832181226E-5 0.0 16-17 0.0 0.0 0.0 1.1174657664362452E-4 0.0 18-19 0.0 0.0 0.0 2.2349315328724903E-4 0.0 20-21 0.0 0.0 0.0 5.028595948963103E-4 0.0 22-23 0.0 0.0 0.0 9.498459014708083E-4 0.0 24-25 0.0 0.0 0.0 0.0017879452262979923 0.0 26-27 0.0 0.0 0.0 0.0025142979744815514 0.0 28-29 0.0 0.0 0.0 0.004134623335814107 0.0 30-31 0.0 0.0 0.0 0.009554332303029897 0.0 32-33 0.0 0.0 0.0 0.021399469427254098 0.0 34-35 0.0 0.0 0.0 0.037826216193866904 0.0 36-37 0.0 0.0 0.0 0.06570698706645123 0.0 38-39 0.0 0.0 0.0 0.11588119997943863 0.0 40-41 0.0 0.0 0.0 0.17013416293991834 0.0 42-43 0.0 0.0 0.0 0.2278512697763504 0.0 44-45 0.0 0.0 0.0 0.28903252048873485 0.0 46-47 0.0 0.0 0.0 0.3588182576026784 0.0 48-49 0.0 0.0 0.0 0.4373761009831464 0.0 50-51 0.0 0.0 0.0 0.528561307524344 0.0 52-53 0.0 0.0 0.0 0.6151090311348312 0.0 54-55 0.0 0.0 0.0 0.707746943172396 0.0 56-57 0.0 0.0 0.0 0.8101626806662778 0.0 58-59 0.0 0.0 0.0 0.9334750279925175 0.0 60-61 0.0 0.0 0.0 1.071035063840819 0.0 62-63 0.0 0.0 0.0 1.2011639523423199 0.0 64-65 0.0 0.0 0.0 1.3330249127817968 0.0 66-67 0.0 0.0 0.0 1.4936047434186854 0.0 68-69 0.0 0.0 0.0 1.6782659613222748 0.0 70-71 0.0 0.0 0.0 1.8830415630217168 0.0 72-73 0.0 0.0 0.0 2.096086411392787 0.0 74-75 0.0 0.0 0.0 2.313265883099671 0.0 76-77 0.0 0.0 0.0 2.5347475980073346 0.0 78-79 0.0 0.0 0.0 2.796513953795025 0.0 80-81 0.0 0.0 0.0 3.10124686830219 0.0 82-83 0.0 0.0 0.0 3.427882111831504 0.0 84-85 0.0 0.0 0.0 3.7536233827476693 0.0 86-87 0.0 0.0 0.0 4.094394568222403 0.0 88-89 0.0 0.0 0.0 4.470030685609946 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1140 0.0 57.738678 1 GTATCAA 2115 0.0 46.45681 1 AAACCGT 175 0.0 46.135044 6 CCGTGCG 180 0.0 42.21507 9 AACCGTG 230 0.0 37.167618 7 ATCAACG 2760 0.0 35.618965 3 TCAACGC 2940 0.0 33.43821 4 ACCGTGC 275 0.0 32.812622 8 CGCAGAG 3445 0.0 28.398672 8 CAACGCA 3510 0.0 27.87277 5 TTAATAC 615 0.0 27.800167 3 TATCAAC 3605 0.0 27.796955 2 ACGCAGA 3570 0.0 27.537352 7 TAATATA 190 3.965397E-10 27.49534 4 AACGCAG 3695 0.0 26.477245 6 GTACATG 5465 0.0 26.183254 1 GCAGAGT 3885 0.0 25.426838 9 AATGCGG 225 1.0186341E-10 25.32904 7 ACATGGG 5600 0.0 24.763662 3 TATAGTA 270 1.8189894E-12 24.625456 2 >>END_MODULE