##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224530_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 738765 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.161013312758456 34.0 33.0 34.0 31.0 34.0 2 33.282466007458396 34.0 34.0 34.0 31.0 34.0 3 33.39942606918303 34.0 34.0 34.0 31.0 34.0 4 36.62157113561146 37.0 37.0 37.0 35.0 37.0 5 36.65526520612103 37.0 37.0 37.0 35.0 37.0 6 36.69170169133621 37.0 37.0 37.0 36.0 37.0 7 36.6675180876192 37.0 37.0 37.0 35.0 37.0 8 36.65147645056276 37.0 37.0 37.0 35.0 37.0 9 38.48991221836443 39.0 39.0 39.0 37.0 39.0 10-11 38.512583162440016 39.0 39.0 39.0 37.5 39.0 12-13 38.494170676737525 39.0 39.0 39.0 37.0 39.0 14-15 40.08051748526256 41.0 40.0 41.0 38.0 41.0 16-17 40.08882526919927 41.0 40.0 41.0 38.0 41.0 18-19 40.08448627100634 41.0 40.0 41.0 38.0 41.0 20-21 40.08237666917084 41.0 40.0 41.0 38.0 41.0 22-23 40.000622660792 41.0 40.0 41.0 38.0 41.0 24-25 39.95510006565011 41.0 40.0 41.0 38.0 41.0 26-27 39.87524652629727 41.0 40.0 41.0 38.0 41.0 28-29 39.847753345109744 41.0 40.0 41.0 38.0 41.0 30-31 39.77601673062476 41.0 40.0 41.0 37.0 41.0 32-33 39.709706740303076 41.0 40.0 41.0 37.0 41.0 34-35 39.62007674971066 41.0 40.0 41.0 37.0 41.0 36-37 39.48550689326105 41.0 40.0 41.0 36.0 41.0 38-39 39.349970558973425 41.0 39.0 41.0 36.0 41.0 40-41 39.19683390523373 41.0 39.0 41.0 35.0 41.0 42-43 39.07003377257991 41.0 39.0 41.0 35.0 41.0 44-45 38.77761128369644 40.5 38.0 41.0 35.0 41.0 46-47 38.515523881071786 40.0 38.0 41.0 35.0 41.0 48-49 38.37366347891414 40.0 37.5 41.0 35.0 41.0 50-51 38.16757967689319 40.0 37.0 41.0 35.0 41.0 52-53 37.881284305564016 40.0 36.0 41.0 34.0 41.0 54-55 37.6450874093927 39.0 35.5 41.0 34.0 41.0 56-57 37.3784410468823 39.0 35.0 41.0 34.0 41.0 58-59 37.07587527833614 38.5 35.0 41.0 33.0 41.0 60-61 36.803415159083066 37.5 35.0 41.0 33.0 41.0 62-63 36.57408715897478 37.0 35.0 40.5 33.0 41.0 64-65 36.29251250397623 36.5 35.0 40.0 33.0 41.0 66-67 36.01531542506751 36.0 35.0 40.0 33.0 41.0 68-69 35.747541505079425 35.5 35.0 39.0 32.0 41.0 70-71 35.467241274288845 35.0 35.0 39.0 32.0 41.0 72-73 35.18687742380865 35.0 35.0 38.5 32.0 40.5 74-75 34.89962437310918 35.0 35.0 37.0 31.0 40.0 76-77 33.130513086028714 34.5 32.0 35.5 28.5 38.5 78-79 34.44587791787646 35.0 34.5 36.0 31.5 39.0 80-81 34.408657692229596 35.0 35.0 36.0 32.0 38.5 82-83 34.23495563541857 35.0 35.0 36.0 32.0 37.0 84-85 34.05362530710036 35.0 35.0 35.5 32.0 37.0 86-87 33.89250099828768 35.0 35.0 35.0 31.5 36.5 88-89 33.76535637178264 35.0 34.5 35.0 31.0 36.0 90-91 33.62736729541871 35.0 34.0 35.0 31.0 36.0 92-93 33.53694882675817 35.0 34.0 35.0 31.0 36.0 94-95 33.44869072032378 35.0 34.0 35.0 31.0 36.0 96-97 33.41383051443964 35.0 34.0 35.0 31.0 35.0 98-99 33.386113310728035 35.0 34.0 35.0 31.0 35.0 100-101 32.533556002246996 34.5 33.0 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 3.0 14 11.0 15 43.0 16 130.0 17 286.0 18 565.0 19 860.0 20 1230.0 21 1846.0 22 2599.0 23 2583.0 24 2105.0 25 2303.0 26 2997.0 27 3920.0 28 4974.0 29 5745.0 30 6120.0 31 6679.0 32 7975.0 33 10856.0 34 19034.0 35 39603.0 36 112739.0 37 223669.0 38 213430.0 39 66411.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.489160297037785 18.7562222887142 13.334058700323695 23.420558713924326 2 16.147489391078356 19.631276522304116 38.9915602390476 25.229673847569934 3 19.31967540422191 26.784430772979228 28.27989956210703 25.61599426069183 4 12.761297570946105 16.69989780241349 38.781479902269325 31.757324724371077 5 13.708283418949192 38.48720499752966 34.178256955865535 13.626254627655616 6 29.936312629861998 36.60081351986085 19.461804498047417 14.001069352229734 7 27.338734238898706 30.940420837478765 22.481709339235074 19.239135584387455 8 26.912346957422184 33.50036885883873 20.13766217944813 19.449622004290944 9 27.19904164382449 14.961997387531895 20.214276529072166 37.624684439571446 10-11 26.97853850683235 24.514493783544157 26.988555223921 21.51841248570249 12-13 27.18767131631845 22.626816375978827 27.598762800078507 22.58674950762421 14-15 24.226513167245333 24.61736817526548 24.847617307262794 26.308501350226393 16-17 23.545241044175075 27.029163536442574 26.003262201105898 23.42233321827645 18-19 23.517762752702147 26.278248157397822 27.133932982748238 23.0700561071518 20-21 25.092469200057664 24.600834236311005 26.707203088420524 23.59949347521081 22-23 25.117020729386347 25.489876251763093 25.88479583300621 23.508307185844348 24-25 24.469993123649772 25.032689735829035 26.298858634151095 24.1984585063701 26-27 23.999542470079508 26.388105846433735 26.423435819584313 23.188915863902444 28-29 23.794172609817725 26.29946712998089 26.84113596815098 23.065224292050402 30-31 23.877040237586666 25.160471166627413 26.933708014218382 24.028780581567542 32-33 23.853032804138266 25.497469758589858 27.259806419781164 23.389691017490712 34-35 24.62825165586222 25.235502660614912 26.3057724040561 23.830473279466766 36-37 23.630512248689513 25.264279985516126 27.07036524411085 24.034842521683515 38-39 23.919852727186587 25.49714726604536 26.314118833458544 24.26888117330951 40-41 24.170676737528172 25.579717501505893 26.678104674693575 23.57150108627236 42-43 24.235785398604428 25.56550459212334 26.831401054462518 23.367308954809715 44-45 24.38424128793391 25.20574926983461 26.419972857814884 23.990036584416597 46-47 24.131243793630862 24.983438392853515 26.20154629189341 24.683771521622212 48-49 23.77950890681683 25.163720288050246 26.652363419784503 24.404407385348424 50-51 24.28133438914946 25.367809790664147 26.027424147056237 24.323431673130155 52-53 24.572444940166996 25.736347645291563 25.421429968548843 24.2697774459926 54-55 24.32045373021191 24.900137391457363 26.1048506629307 24.674558215400026 56-57 24.610281093074306 25.443563097878652 25.457709466086282 24.48844634296076 58-59 24.926775763895 25.35880891284183 25.989830531425824 23.72458479183734 60-61 24.377232390685634 25.796619899858914 25.64625933237471 24.179888377080744 62-63 24.215210520260165 25.375457689522378 26.153851360040065 24.25548043017739 64-65 24.554019207731823 25.129303635120774 25.737616156693942 24.579061000453457 66-67 24.012913443381862 25.214716452457818 25.723200205748782 25.049169898411538 68-69 24.514899866669374 25.372750468687606 26.140585977949687 23.971763686693333 70-71 24.990829289422212 25.070421581964496 25.979235616197304 23.95951351241599 72-73 24.31632521843888 25.28794677603839 26.186134968494716 24.209593037028014 74-75 24.429351688290595 25.010998084641262 26.149452126183565 24.410198100884585 76-77 24.44175376591593 24.42875909711417 25.898577963613572 25.230909173356324 78-79 24.290585725347498 24.383585936527016 25.96472489806527 25.361103440060212 80-81 23.79354059682844 25.48883442542284 25.947735377946902 24.76988959980182 82-83 23.919505549170974 25.44300644729878 26.236770042733827 24.400717960796417 84-85 24.031003554633884 24.86125286631274 26.54076999921489 24.566973579838486 86-87 23.765202737000262 25.96509038733562 25.939777872530506 24.329929003133607 88-89 24.311452220936292 24.96714110711796 25.295459313854877 25.425947358090866 90-91 24.228746624434024 25.122264860950374 25.568617896083328 25.08037061853228 92-93 24.206885816193243 25.305543711464402 26.11635635147848 24.371214120863876 94-95 24.228543582871414 25.071166067694055 25.869119408742968 24.83117094069156 96-97 24.336764735741408 25.635486250702183 26.02431084309625 24.00343817046016 98-99 22.691789676013347 26.151888624934855 26.349041982227096 24.807279716824702 100-101 23.81106214558406 25.313484347624087 25.89158910405276 24.98386440273909 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 2.5 3 4.5 4 4.0 5 4.0 6 9.0 7 19.5 8 33.5 9 45.0 10 46.5 11 47.5 12 58.0 13 67.0 14 78.5 15 99.0 16 111.0 17 109.0 18 122.5 19 149.0 20 170.0 21 210.0 22 257.5 23 336.0 24 467.0 25 636.5 26 956.0 27 1407.0 28 1943.5 29 2735.0 30 3958.0 31 5338.0 32 7125.5 33 9094.0 34 10626.0 35 12073.0 36 13940.5 37 15454.5 38 16311.0 39 17260.0 40 18428.0 41 18845.0 42 18667.0 43 19337.5 44 20702.5 45 22726.0 46 24834.5 47 26478.0 48 27982.5 49 31410.0 50 36020.5 51 35948.5 52 33085.0 53 34293.0 54 37108.0 55 36583.0 56 31004.5 57 25772.0 58 24536.5 59 23995.5 60 19940.5 61 14428.5 62 11571.5 63 7978.5 64 4494.5 65 2968.5 66 2294.0 67 1854.0 68 1448.5 69 961.5 70 518.5 71 318.0 72 240.0 73 207.5 74 155.0 75 120.0 76 85.5 77 41.5 78 28.0 79 17.0 80 10.5 81 5.0 82 3.5 83 4.0 84 1.5 85 0.5 86 0.5 87 0.0 88 0.5 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4744404512937132 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 7.444857295621747E-4 22-23 9.475272921700405E-4 24-25 1.3536104173857724E-4 26-27 0.0020980961469479467 28-29 0.0039931507312880275 30-31 4.0608312521573167E-4 32-33 2.0304156260786584E-4 34-35 0.0035193870852030075 36-37 0.0016920130217322152 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008460065108661076 46-47 0.08284095754400926 48-49 6.768052086928862E-4 50-51 0.0 52-53 6.768052086928862E-5 54-55 0.0 56-57 0.008053981983445344 58-59 0.03790109168680162 60-61 0.028019735639885485 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 6.768052086928862E-5 78-79 0.007715579379098901 80-81 0.005888205315628109 82-83 8.121662504314633E-4 84-85 0.0014889714591243494 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06639459097277213 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 738765.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.764786722777544 #Duplication Level Percentage of deduplicated Percentage of total 1 74.484522706082 35.57737341203888 2 14.730256466722436 14.071751170096238 3 4.832070457411344 6.924084444830611 4 2.105486442807002 4.022724435535041 5 1.0901704896130415 2.6035880463916454 6 0.6321899102548986 1.8117849738970264 7 0.3923343609695232 1.3117836953008548 8 0.2739354502516859 1.0467574685663852 9 0.19858063224906347 0.8536645391985755 >10 1.001981640969121 8.885033742485572 >50 0.11841867931817467 4.009269444591426 >100 0.12468111859372093 12.50219176124418 >500 0.01053242326018652 3.349554040653087 >1k 0.004839221497923537 3.03043882517053 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1837 0.24865823367376635 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1796 0.24310843096248472 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1757 0.23782935033468017 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1682 0.22767727220428688 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1421 0.19234804031051822 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1330 0.1800301855123077 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1272 0.17217924509147023 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1237 0.16744160863062002 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1228 0.1662233592549728 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1178 0.15945530716804396 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1131 0.15309333820633084 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1124 0.1521458109141608 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1081 0.14632528611940196 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1073 0.14524239778549336 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1072 0.1451070367437548 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1052 0.14239981590898323 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1017 0.13766217944813303 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 964 0.13048804423598845 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 959 0.12981123902729555 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 959 0.12981123902729555 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 948 0.1283222675681712 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 927 0.1254796856916611 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 862 0.11668121797865356 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 766 0.10368655797175015 No Hit GGATGGCACTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCT 753 0.10192686442914865 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.3536104173857721E-4 0.0 10-11 0.0 0.0 0.0 1.3536104173857721E-4 0.0 12-13 0.0 0.0 0.0 1.3536104173857721E-4 0.0 14-15 0.0 0.0 0.0 1.3536104173857721E-4 0.0 16-17 0.0 0.0 0.0 2.7072208347715443E-4 0.0 18-19 0.0 0.0 0.0 2.7072208347715443E-4 0.0 20-21 0.0 0.0 0.0 4.0608312521573167E-4 0.0 22-23 0.0 0.0 0.0 6.76805208692886E-4 0.0 24-25 0.0 0.0 0.0 0.0010152078130393292 0.0 26-27 0.0 0.0 0.0 0.0016243325008629267 0.0 28-29 0.0 0.0 0.0 0.00291026239737941 0.0 30-31 0.0 0.0 0.0 0.005752844273889532 0.0 32-33 0.0 0.0 0.0 0.011302646985171198 0.0 34-35 0.0 0.0 0.0 0.01766461594688433 0.0 36-37 0.0 0.0 0.0 0.028425818765101217 0.0 38-39 0.0 0.0 0.0 0.0504896685684893 0.0 40-41 0.0 0.0 0.0 0.07776491847881262 0.0 42-43 0.0 0.0 0.0 0.10172382286654078 0.0 44-45 0.0 0.0 0.0 0.12825458704730192 0.0 46-47 0.0 0.0 0.0 0.15918458508456682 0.0 48-49 0.0 0.0 0.0 0.19857464823049278 0.0 50-51 0.0 0.0 0.0 0.24202554262857606 0.0 52-53 0.0 0.0 0.0 0.28608556171448296 0.0 54-55 0.0 0.0 0.0 0.3286566093412655 0.0 56-57 0.0 0.0 0.0 0.3771835428045454 0.0 58-59 0.0 0.0 0.0 0.4357948738773494 0.0 60-61 0.0 0.0 0.0 0.49968528557795777 0.0 62-63 0.0 0.0 0.0 0.5717650403037502 0.0 64-65 0.0 0.0 0.0 0.6387010754434765 0.0 66-67 0.0 0.0 0.0 0.7205945056953158 0.0 68-69 0.0 0.0 0.0 0.8146027491827577 0.0 70-71 0.0 0.0 0.0 0.9146345590275662 0.0 72-73 0.0 0.0 0.0 1.0252245301279839 0.0 74-75 0.0 0.0 0.0 1.134257849248408 0.0 76-77 0.0 0.0 0.0 1.246404472328819 0.0 78-79 0.0 0.0 0.0 1.3803442231291412 0.0 80-81 0.0 0.0 0.0 1.5358740600867664 0.0 82-83 0.0 0.0 0.0 1.708120985699106 0.0 84-85 0.0 0.0 0.0 1.8815184801662235 0.0 86-87 0.0 0.0 0.0 2.06642166318112 0.0 88-89 0.0 0.0 0.0 2.271425960894195 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 860 0.0 56.490067 1 CCGTGCG 310 0.0 50.55072 9 AAACCGT 320 0.0 48.971012 6 GTATCAA 1650 0.0 47.917538 1 AACCGTG 355 0.0 45.480545 7 ACCGTGC 360 0.0 44.84887 8 ATCAACG 2380 0.0 33.12121 3 TCAACGC 2495 0.0 31.594584 4 TATCAAC 2770 0.0 28.972239 2 ACGCAGA 2795 0.0 28.373293 7 CGCAGAG 2795 0.0 28.373293 8 CAACGCA 2835 0.0 27.80546 5 AACGCAG 2885 0.0 27.488165 6 GTACAAC 160 6.0737875E-8 26.791245 1 CAAAACC 700 0.0 25.778679 4 TACATGG 4015 0.0 25.31065 2 GTCTAAT 660 0.0 25.257738 1 GCAGAGT 3220 0.0 24.628372 9 GTATTGG 215 1.6079866E-9 24.368263 1 GTGCGCG 335 0.0 24.0979 10-11 >>END_MODULE