##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224523_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 362194 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36525729305289 34.0 31.0 34.0 31.0 34.0 2 32.50125347189628 34.0 31.0 34.0 31.0 34.0 3 32.63084700464392 34.0 31.0 34.0 31.0 34.0 4 35.92690657492946 37.0 37.0 37.0 35.0 37.0 5 35.95917381292898 37.0 37.0 37.0 35.0 37.0 6 36.075106158578 37.0 37.0 37.0 35.0 37.0 7 36.035340176811324 37.0 37.0 37.0 35.0 37.0 8 36.07116075915118 37.0 37.0 37.0 35.0 37.0 9 37.81759499052994 39.0 39.0 39.0 35.0 39.0 10-11 37.89368266729984 39.0 39.0 39.0 37.0 39.0 12-13 37.89628072248574 39.0 39.0 39.0 37.0 39.0 14-15 39.393975328139064 41.0 40.0 41.0 37.0 41.0 16-17 39.232490046770515 41.0 40.0 41.0 36.5 41.0 18-19 39.35308840013915 41.0 40.0 41.0 37.0 41.0 20-21 39.42123005902914 41.0 40.0 41.0 37.0 41.0 22-23 39.36637823928613 41.0 40.0 41.0 37.0 41.0 24-25 39.310398570931596 41.0 40.0 41.0 36.5 41.0 26-27 39.157829781829626 41.0 40.0 41.0 36.0 41.0 28-29 39.06345632451117 41.0 39.5 41.0 35.0 41.0 30-31 38.93995483083651 41.0 39.0 41.0 35.0 41.0 32-33 38.688314825756365 41.0 39.0 41.0 35.0 41.0 34-35 38.65348404446236 41.0 39.0 41.0 35.0 41.0 36-37 38.617540599789066 41.0 39.0 41.0 35.0 41.0 38-39 38.47235735545039 41.0 38.5 41.0 35.0 41.0 40-41 38.356292484138336 40.0 38.0 41.0 35.0 41.0 42-43 38.17131840947117 40.0 38.0 41.0 34.0 41.0 44-45 37.91378101238563 40.0 38.0 41.0 33.0 41.0 46-47 37.62932986189722 40.0 37.5 41.0 33.0 41.0 48-49 37.330679138804065 40.0 37.0 41.0 32.0 41.0 50-51 36.030019823630425 38.5 35.5 40.0 29.5 40.5 52-53 36.32671855414502 39.0 35.5 40.0 30.5 40.5 54-55 36.75509257469754 40.0 35.5 41.0 31.0 41.0 56-57 36.608038785844045 39.0 35.0 41.0 31.0 41.0 58-59 36.467130874614156 39.0 35.0 41.0 31.0 41.0 60-61 36.22452194128009 39.0 35.0 41.0 30.0 41.0 62-63 35.95142244211665 38.5 35.0 41.0 30.0 41.0 64-65 35.70207816805359 37.5 35.0 41.0 29.0 41.0 66-67 35.43955587337173 37.0 35.0 40.0 29.0 41.0 68-69 35.13097538887999 36.5 35.0 40.0 29.0 41.0 70-71 34.82698498594675 36.0 35.0 39.0 29.0 41.0 72-73 34.496420426622194 35.5 35.0 39.0 28.0 41.0 74-75 34.18990927513984 35.0 34.0 38.5 28.0 40.5 76-77 33.86227822658575 35.0 34.0 37.0 27.0 39.5 78-79 33.61810245338134 35.0 34.0 37.0 27.0 39.0 80-81 33.334051640833366 35.0 34.0 36.0 27.0 39.0 82-83 33.076124949612634 35.0 34.0 36.0 26.0 37.5 84-85 32.8537275603682 35.0 34.0 36.0 26.0 37.0 86-87 32.641778991369264 35.0 34.0 35.0 26.0 37.0 88-89 32.48905144756677 35.0 34.0 35.0 25.5 36.0 90-91 32.32998199859744 35.0 33.0 35.0 25.0 36.0 92-93 32.20579026709443 35.0 33.0 35.0 25.0 36.0 94-95 32.067770310938336 35.0 33.0 35.0 25.0 36.0 96-97 31.94689724291402 35.0 33.0 35.0 24.0 35.0 98-99 31.893765495839247 35.0 33.0 35.0 24.0 35.0 100-101 30.756365373253008 34.5 31.0 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 31.0 8 95.0 9 120.0 10 142.0 11 327.0 12 518.0 13 604.0 14 634.0 15 634.0 16 760.0 17 979.0 18 1275.0 19 1581.0 20 2083.0 21 2982.0 22 3721.0 23 3374.0 24 2595.0 25 2222.0 26 1905.0 27 2072.0 28 2263.0 29 2490.0 30 3132.0 31 3978.0 32 5091.0 33 7248.0 34 11668.0 35 21373.0 36 46546.0 37 87906.0 38 108933.0 39 32874.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.88896969160706 18.968668515604907 12.55941534471269 22.582946448075344 2 16.636388233929882 20.269800162343937 38.97220826407947 24.121603339646708 3 19.89099764214758 27.840328663644343 28.783193537165165 23.48548015704291 4 12.510974781470704 16.783546938933277 38.81041651711514 31.895061762480882 5 12.69209318762873 39.88525486341574 33.46714744032204 13.955504508633496 6 28.702297663682998 37.218175894686276 19.430194867943698 14.64933157368703 7 26.4844254736412 32.72362325162758 22.227866833796252 18.56408444093497 8 26.770460029707838 33.519329420145006 20.652191919247695 19.05801863089946 9 27.999911649557973 14.548280755617155 20.479080271898486 36.97272732292639 10-11 25.71577662799494 25.786595029183257 27.513293980573945 20.984334362247857 12-13 26.544200069575975 24.1140107235349 27.62166131962429 21.720127887264837 14-15 24.066412388730388 25.17089189689315 25.71857453372405 25.04412118065241 16-17 22.442805457742832 27.874024885030718 26.93686462979821 22.74630502742824 18-19 22.24798259034847 26.721357201641542 28.799109633303694 22.231550574706297 20-21 24.282038781989755 24.898114760550698 28.68806613460314 22.131780322856404 22-23 23.895734335285667 26.182451099569015 27.835948723615868 22.08586584152945 24-25 22.638073317860304 25.9909619465642 28.73123457932183 22.63973015625367 26-27 22.47828511792023 26.67313649591103 28.734600794049598 22.11397759211914 28-29 22.27507910125513 26.647459648696554 28.8265404727853 22.250920777263016 30-31 22.5125209142062 25.967713435341285 28.941396047422103 22.57836960303042 32-33 22.33195469831085 26.152421078206707 29.086622086506125 22.429002136976315 34-35 22.888562483089174 26.011612561224094 28.643765495839247 22.456059459847484 36-37 22.32545744757234 25.982690725122747 29.015956124799096 22.675895702505812 38-39 22.389100266722625 26.40705848570024 28.384561012110197 22.81928023546693 40-41 22.994112003092408 25.843957727909654 28.860020293916655 22.30190997508128 42-43 22.860542874734595 26.126433322381224 28.494573185378663 22.518450617505515 44-45 22.835782774069294 26.199236520022367 28.107798402628692 22.85718230327965 46-47 22.873515298431226 26.079531963533352 27.72864818301794 23.318304555017477 48-49 22.417406141460102 26.354798809477792 27.88436583709283 23.343429211969276 50-51 22.63924857949055 26.85729194851378 27.13973726787302 23.363722204122652 52-53 23.249556867314205 26.88434927138495 26.535641120504483 23.330452740796368 54-55 22.995963489179832 26.348586669022676 27.113922373092876 23.54152746870462 56-57 23.06954284168153 26.896083314466836 26.756103082878234 23.278270760973403 58-59 23.32435421450199 26.81792638963485 26.955581666029243 22.902137729833917 60-61 23.22117442390269 27.037706932497553 26.82576939539122 22.915349248208543 62-63 23.054478469322376 26.670588365259274 27.362547226088687 22.912385939329667 64-65 23.63313942889342 26.092438831711938 26.806460166724673 23.46796157266997 66-67 22.86381754895612 26.523773559896778 26.43347586745845 24.178933023688646 68-69 22.94267712883151 26.722695571986282 27.253212366853123 23.081414932329082 70-71 23.452348741282297 26.151316697681352 26.988437135899545 23.407897425136806 72-73 23.21076550136115 26.518799317492835 27.098737140869254 23.17169804027676 74-75 23.09038802409758 26.50941208302733 27.11267994500185 23.28751994787324 76-77 23.117169251837414 26.19162658685677 26.727941379481713 23.963262781824106 78-79 23.182981097011226 25.675397672437477 27.16060291849665 23.98101831205464 80-81 22.871661565321162 26.85264478060531 26.60402324887568 23.671670405197847 82-83 22.998538766873928 26.895528737124437 26.852990003397576 23.252942492604063 84-85 22.872056173491583 26.26428329777612 27.339699110034037 23.52396141869826 86-87 22.514130380732954 27.30713342504959 26.823827440840255 23.354908753377202 88-89 23.079876104557147 26.47070601898202 26.701318356880186 23.748099519580645 90-91 22.795518423828113 26.35259004842709 26.978083568474354 23.873807959270447 92-93 22.728301834697735 26.668967516600635 27.28481300992587 23.317917638775764 94-95 22.966697405257953 26.293781785451998 27.225050663456603 23.51447014583345 96-97 23.207866502482094 26.67120382999166 27.015356411205044 23.1055732563212 98-99 22.315312554356378 27.01750171869694 27.079071102975483 23.588114623971197 100-101 22.959565576464673 26.480556177028696 26.78894495957663 23.770933286930003 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 2.0 2 3.5 3 4.0 4 10.0 5 14.0 6 16.5 7 28.5 8 45.0 9 71.5 10 79.0 11 88.5 12 124.5 13 151.0 14 177.0 15 202.5 16 228.5 17 238.0 18 274.5 19 329.5 20 364.0 21 401.5 22 458.0 23 570.5 24 733.5 25 947.5 26 1292.0 27 1779.5 28 2214.5 29 2722.0 30 3414.5 31 4226.0 32 5257.0 33 6394.0 34 7656.0 35 8768.0 36 9942.0 37 10833.0 38 10802.5 39 10889.5 40 10873.0 41 10595.0 42 10357.5 43 10395.5 44 10802.0 45 11668.5 46 12581.0 47 12435.5 48 12651.5 49 13646.0 50 14707.5 51 14330.0 52 13352.0 53 13848.0 54 14373.0 55 14115.0 56 12212.0 57 10142.5 58 9186.0 59 8542.0 60 7300.5 61 5515.5 62 4439.5 63 3251.0 64 2003.5 65 1462.5 66 1237.0 67 1059.5 68 887.5 69 650.0 70 425.0 71 294.5 72 235.5 73 184.5 74 150.5 75 124.0 76 90.0 77 72.0 78 60.5 79 49.5 80 34.0 81 19.5 82 13.0 83 9.0 84 11.5 85 11.0 86 8.0 87 4.5 88 2.0 89 1.0 90 3.0 91 3.5 92 1.5 93 1.5 94 1.5 95 2.0 96 2.5 97 2.5 98 1.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15047184657945742 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03395970115462984 16-17 0.06888573526894427 18-19 0.026505132608491584 20-21 0.0398957464784066 22-23 0.06460626073319824 24-25 0.01615156518329956 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0209832299817225 38-39 0.00552190262676908 40-41 0.004555569667084491 42-43 0.003037046444722994 44-45 0.01007747229385357 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.015875470051961105 60-61 0.016289612748968785 62-63 0.02926608392187612 64-65 0.04417522101415264 66-67 0.01615156518329956 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.015323279789284196 80-81 0.05466683600501388 82-83 0.04721226745887563 84-85 0.028023655830853082 86-87 0.057427787318398434 88-89 0.03161289253825298 90-91 0.0 92-93 0.002484856182046086 94-95 0.0 96-97 0.0 98-99 2.7609513133845397E-4 100-101 0.04169036483210655 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 362194.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.68967155085428 #Duplication Level Percentage of deduplicated Percentage of total 1 84.20883517365476 52.79024218716442 2 10.351036280120333 12.978061292234406 3 2.356640620442772 4.432110793768764 4 0.8854108087403569 2.2202445115003697 5 0.43087048547460194 1.3505564607679965 6 0.2722073367092107 1.023875311921993 7 0.20164857090347088 0.8848897875046416 8 0.13899921103233775 0.6971051908356108 9 0.1110218344419511 0.6263930102525311 >10 0.873079249690296 10.741864490733628 >50 0.11290759507219744 4.9613860418171045 >100 0.05467572517271275 5.9662589954639484 >500 0.002667108545010378 1.3270119260345314 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 988 0.2727819897623925 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 922 0.25455971109405456 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 762 0.21038449007990193 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 713 0.1968558286443177 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 697 0.19243830654290242 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 680 0.1877446893101487 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 499 0.13777147053788855 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 447 0.12341452370828893 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 421 0.11623605029348913 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 407 0.11237071845475077 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 401 0.11071414766672004 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 394 0.10878148174735087 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 370 0.10215519859522798 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.7609513133845397E-4 0.0 18-19 0.0 0.0 0.0 4.1414269700768095E-4 0.0 20-21 0.0 0.0 0.0 0.0016565707880307238 0.0 22-23 0.0 0.0 0.0 0.0026229037477153126 0.0 24-25 0.0 0.0 0.0 0.0040033794044075826 0.0 26-27 0.0 0.0 0.0 0.004279474535746036 0.0 28-29 0.0 0.0 0.0 0.005659950192438307 0.0 30-31 0.0 0.0 0.0 0.012562328475899656 0.0 32-33 0.0 0.0 0.0 0.0260909899114839 0.0 34-35 0.0 0.0 0.0 0.04624593449919104 0.0 36-37 0.0 0.0 0.0 0.06929987796595195 0.0 38-39 0.0 0.0 0.0 0.11168048062640464 0.0 40-41 0.0 0.0 0.0 0.1637244128837032 0.0 42-43 0.0 0.0 0.0 0.21424982191864028 0.0 44-45 0.0 0.0 0.0 0.26712203956995423 0.0 46-47 0.0 0.0 0.0 0.3213747328779605 0.0 48-49 0.0 0.0 0.0 0.3819776142067511 0.0 50-51 0.0 0.0 0.0 0.44879263599065694 0.0 52-53 0.0 0.0 0.0 0.5122945161985013 0.0 54-55 0.0 0.0 0.0 0.5807661087704379 0.0 56-57 0.0 0.0 0.0 0.6602815065959127 0.0 58-59 0.0 0.0 0.0 0.7509787572405948 0.0 60-61 0.0 0.0 0.0 0.8587939060282611 0.0 62-63 0.0 0.0 0.0 0.961501294886166 0.0 64-65 0.0 0.0 0.0 1.0597911616426556 0.0 66-67 0.0 0.0 0.0 1.1861046842299983 0.0 68-69 0.0 0.0 0.0 1.3187683948381255 0.0 70-71 0.0 0.0 0.0 1.4594388642550677 0.0 72-73 0.0 0.0 0.0 1.6107389962285406 0.0 74-75 0.0 0.0 0.0 1.764247889252721 0.0 76-77 0.0 0.0 0.0 1.9259015886513857 0.0 78-79 0.0 0.0 0.0 2.1176496573659422 0.0 80-81 0.0 0.0 0.0 2.3269297669204905 0.0 82-83 0.0 0.0 0.0 2.5576072491537687 0.0 84-85 0.0 0.0 0.0 2.781106257972247 0.0 86-87 0.0 0.0 0.0 3.034423540975278 0.0 88-89 0.0 0.0 0.0 3.3125893857987707 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 720 0.0 65.3561 1 AAACCGT 135 0.0 63.32312 6 AACCGTG 145 0.0 58.95601 7 CCGTGCG 155 0.0 55.16762 9 ACCGTGC 180 0.0 50.130802 8 GTATCAA 1510 0.0 45.643036 1 TGCGCGG 115 0.0 37.183315 12-13 GACTATC 65 1.3276479E-4 36.53257 7 ATCAACG 1900 0.0 36.49411 3 TCAACGC 1965 0.0 35.286926 4 TATCAAC 2125 0.0 33.077015 2 CAACGCA 2175 0.0 32.09827 5 GTGCGCG 135 0.0 31.67468 10-11 GTAATAC 60 0.00395053 31.661558 3 TGGTATC 345 0.0 31.661558 2 AACGCAG 2230 0.0 31.306608 6 ACGCAGA 2325 0.0 29.823147 7 CGCAGAG 2350 0.0 29.505878 8 AAGACCG 245 0.0 29.07694 5 GTACATG 2770 0.0 28.656303 1 >>END_MODULE