##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224523_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 362194 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.16507451807595 34.0 33.0 34.0 31.0 34.0 2 33.27971749946161 34.0 33.0 34.0 31.0 34.0 3 33.392968961385336 34.0 34.0 34.0 31.0 34.0 4 36.60752248794845 37.0 37.0 37.0 35.0 37.0 5 36.65509091812675 37.0 37.0 37.0 35.0 37.0 6 36.703805143100105 37.0 37.0 37.0 36.0 37.0 7 36.68186938491527 37.0 37.0 37.0 36.0 37.0 8 36.68046406069676 37.0 37.0 37.0 36.0 37.0 9 38.531726091542104 39.0 39.0 39.0 37.0 39.0 10-11 38.557786710989134 39.0 39.0 39.0 37.5 39.0 12-13 38.5501982363043 39.0 39.0 39.0 37.5 39.0 14-15 40.12548247624201 41.0 40.0 41.0 38.0 41.0 16-17 40.132498053529325 41.0 40.0 41.0 38.0 41.0 18-19 40.17013258088207 41.0 40.0 41.0 38.5 41.0 20-21 40.18220346002418 41.0 40.0 41.0 39.0 41.0 22-23 40.091789206889125 41.0 40.0 41.0 38.0 41.0 24-25 40.05050608237575 41.0 40.0 41.0 38.0 41.0 26-27 39.987011104546184 41.0 40.0 41.0 38.0 41.0 28-29 39.94207248049388 41.0 40.0 41.0 38.0 41.0 30-31 39.82831714495546 41.0 40.0 41.0 37.5 41.0 32-33 39.71271335251274 41.0 40.0 41.0 37.0 41.0 34-35 39.59853697189904 41.0 40.0 41.0 36.0 41.0 36-37 39.463094363793985 41.0 40.0 41.0 36.0 41.0 38-39 39.33484955576293 41.0 39.5 41.0 35.0 41.0 40-41 39.176823746390056 41.0 39.0 41.0 35.0 41.0 42-43 39.03472724561975 41.0 39.0 41.0 35.0 41.0 44-45 38.73114408300524 41.0 39.0 41.0 35.0 41.0 46-47 38.40556718222831 40.5 38.0 41.0 35.0 41.0 48-49 38.20817158760222 40.0 38.0 41.0 35.0 41.0 50-51 38.02490930274936 40.0 37.5 41.0 34.5 41.0 52-53 37.78160875111128 40.0 37.0 41.0 34.0 41.0 54-55 37.582468235255135 40.0 36.5 41.0 34.0 41.0 56-57 37.364014864961874 40.0 35.5 41.0 34.0 41.0 58-59 37.10640292219087 39.0 35.0 41.0 33.0 41.0 60-61 36.85768262312462 39.0 35.0 41.0 33.0 41.0 62-63 36.63565105992921 39.0 35.0 41.0 33.0 41.0 64-65 36.37776302202687 38.0 35.0 41.0 33.0 41.0 66-67 36.10206408720188 37.0 35.0 40.0 32.0 41.0 68-69 35.814916867755954 37.0 35.0 40.0 32.0 41.0 70-71 35.51128952992043 36.0 35.0 39.0 32.0 41.0 72-73 35.189228700641095 36.0 35.0 39.0 31.0 41.0 74-75 34.8639472216547 35.0 35.0 38.5 31.0 40.5 76-77 33.02442475579386 34.5 32.0 36.5 28.0 39.0 78-79 34.29248827976167 35.0 34.5 37.0 31.0 39.0 80-81 34.20850152128418 35.0 35.0 36.5 31.0 39.0 82-83 33.99853807627956 35.0 35.0 36.0 31.0 38.0 84-85 33.79421525480819 35.0 35.0 36.0 31.0 37.0 86-87 33.60365577563405 35.0 35.0 35.5 31.0 37.0 88-89 33.45089648089146 35.0 34.5 35.0 31.0 36.0 90-91 33.307006742243104 35.0 34.0 35.0 30.5 36.0 92-93 33.21623770686428 35.0 34.0 35.0 30.0 36.0 94-95 33.108582693252785 35.0 34.0 35.0 30.0 36.0 96-97 33.051632550511606 35.0 34.0 35.0 30.0 35.5 98-99 33.00192162211412 35.0 34.0 35.0 30.0 35.0 100-101 32.190892173807406 34.5 32.5 35.0 26.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 4.0 15 24.0 16 85.0 17 245.0 18 532.0 19 900.0 20 1292.0 21 2053.0 22 2824.0 23 2677.0 24 1802.0 25 1352.0 26 1387.0 27 1676.0 28 2035.0 29 2346.0 30 2532.0 31 2826.0 32 3442.0 33 4593.0 34 7831.0 35 15939.0 36 43870.0 37 95764.0 38 124545.0 39 39567.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.15538229836663 18.8770826225998 12.56715565133701 22.400379427696556 2 16.276912372927217 20.457544851654085 39.445159224062245 23.820383551356457 3 19.752950076478353 28.21609413739598 28.675516435943173 23.3554393501825 4 12.549904194989425 16.76366808947691 39.05862604018841 31.627801675345257 5 12.627763022026869 39.201091127959046 34.15848964919353 14.012656200820556 6 28.697327951318908 36.89072706891886 19.725892753607184 14.686052226155045 7 26.635173415351993 32.392585189152776 22.381375726820433 18.590865668674798 8 26.77349707615256 33.3103254057218 20.59421194166662 19.321965576459025 9 28.043810775440786 14.472906784761758 20.647774397146282 36.83550804265118 10-11 25.87632594686825 25.738002286067683 27.492310750592225 20.893361016471836 12-13 26.7414700409173 24.074667167319173 27.601506375036582 21.58235641672695 14-15 24.054374175165798 25.2498660938613 25.916773883609334 24.77898584736357 16-17 22.265001628961276 27.938480482835164 27.000723369244106 22.795794518959454 18-19 22.08912903029868 26.6248198479268 29.23502321960055 22.051027902173974 20-21 24.186962127717145 25.08952458785558 28.906571394650886 21.81694188977639 22-23 23.83690350796059 26.224321179048044 28.02019931500136 21.918575997990008 24-25 22.873684922562113 25.70048882710485 28.89836510042284 22.5274611499102 26-27 22.565691203715208 26.670200752649876 28.753102679002833 22.011005364632084 28-29 22.41491179873158 26.501105794584507 29.086401073490475 21.99758133319344 30-31 22.600199065963725 25.686687843309407 29.293343438484893 22.41976965224198 32-33 22.501846393837532 26.056723979651704 29.26013100768238 22.181298618828386 34-35 22.970665260373597 26.043157919440947 28.740148240592077 22.24602857959338 36-37 22.528279590377345 25.847973560619238 28.878314240986008 22.745432608017406 38-39 22.50189125164967 26.288674025522234 28.453121807650046 22.756312915178054 40-41 22.798969612969845 26.02514122265968 28.965830466545555 22.210058697824923 42-43 22.761282627542144 26.123983279678846 28.75392745324329 22.360806639535717 44-45 22.84546313016683 26.148092311260584 28.3936095602569 22.61283499831569 46-47 22.851012860559155 26.007230869762836 27.93362078135944 23.208135488318568 48-49 22.423082816686755 26.30832032226046 28.13594465910989 23.132652201942893 50-51 22.9279060393049 26.4575061983357 27.47381237679255 23.14077538556685 52-53 23.15527037996212 26.922450399509657 26.92465916056036 22.997620059967865 54-55 23.041243090719338 26.360872902367237 27.29255592306885 23.30532808384457 56-57 23.27749260687926 26.703593153321314 26.79181358567046 23.227100654128964 58-59 23.417738999781804 26.650205352136798 27.070438406787805 22.861617241293594 60-61 23.371587725269855 26.861294113260804 26.9275753362046 22.839542825264743 62-63 23.01377162515116 26.541577165828258 27.45186281385114 22.992788395169438 64-65 23.372833343456822 26.15324936360072 27.09445766633351 23.379459626608945 66-67 22.801454469151892 26.39690331700691 27.020740266266145 23.780901947575057 68-69 23.141189528263858 26.49118980435899 27.33024290849655 23.037377758880602 70-71 23.54760156159406 26.158081028399145 27.251141653368084 23.043175756638707 72-73 23.0176369569899 26.358388046185194 27.3129869627879 23.31098803403701 74-75 23.003832200422977 26.313522587342696 27.2429968469936 23.43964836524073 76-77 23.002653281537743 26.014169241260877 27.011703704930795 23.971473772270585 78-79 23.078293043226154 25.78990239255588 26.998467549321443 24.133337014896526 80-81 22.5833929276502 26.740821324733343 26.96447258339293 23.71131316422353 82-83 22.85179842210979 26.563636740131287 27.36459203324199 23.219972804516935 84-85 22.675472443064553 26.321798300047078 27.410601996485234 23.592127260403135 86-87 22.28350000276095 27.064777439714625 27.17411111172466 23.477611445799766 88-89 23.018603289949585 26.168020453127326 26.86612699271661 23.947249264206473 90-91 22.791791139555045 26.296128594068374 26.953096959088224 23.95898330728836 92-93 22.736296018156015 26.586994814933433 27.223394092668567 23.45331507424198 94-95 22.731050210660587 26.28977840604759 27.13380122254924 23.845370160742586 96-97 22.945714175276233 26.6517391232323 27.03192211908535 23.370624582406112 98-99 21.6713970965836 27.018255410084098 27.41693677973683 23.893410713595475 100-101 22.424393956765762 26.53715826538125 26.986242898011785 24.052204879841195 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 6.0 3 9.5 4 9.5 5 11.0 6 14.0 7 28.5 8 54.5 9 89.0 10 104.0 11 109.0 12 136.0 13 157.0 14 185.0 15 224.5 16 240.5 17 258.0 18 285.5 19 318.0 20 368.5 21 422.0 22 493.0 23 616.5 24 764.0 25 1007.5 26 1389.5 27 1864.0 28 2289.0 29 2722.0 30 3425.5 31 4201.0 32 5196.0 33 6375.0 34 7489.0 35 8657.0 36 9921.0 37 10861.5 38 10998.5 39 11018.0 40 10803.0 41 10532.5 42 10444.0 43 10470.5 44 10884.0 45 11678.0 46 12377.0 47 12461.0 48 12563.5 49 13535.5 50 15026.5 51 14684.0 52 13350.0 53 13779.0 54 14383.0 55 13850.5 56 12103.5 57 10237.0 58 9460.5 59 8904.0 60 7321.5 61 5402.0 62 4359.5 63 3138.0 64 1913.0 65 1290.5 66 1086.0 67 969.5 68 764.0 69 530.5 70 352.0 71 256.0 72 218.0 73 201.5 74 152.0 75 113.0 76 86.5 77 58.0 78 40.5 79 31.0 80 19.5 81 13.0 82 14.0 83 8.0 84 3.5 85 3.0 86 2.0 87 0.5 88 0.0 89 0.5 90 0.5 91 0.0 92 0.5 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4558330618397875 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 8.28285394015362E-4 22-23 9.66332959684589E-4 24-25 1.3804756566922698E-4 26-27 0.001932665919369178 28-29 0.003037046444722994 30-31 6.90237828346135E-4 32-33 4.14142697007681E-4 34-35 0.0034511891417306744 36-37 0.001932665919369178 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.007730663677476712 46-47 0.07551201842106717 48-49 6.90237828346135E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.009111139334168981 58-59 0.036720652468014384 60-61 0.027747560699514628 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 2.7609513133845397E-4 78-79 0.008006758808815165 80-81 0.006350188020784441 82-83 4.14142697007681E-4 84-85 0.0020707134850384045 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06502040343020592 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 362194.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.167921994645816 #Duplication Level Percentage of deduplicated Percentage of total 1 83.29728089098583 50.95121579905923 2 10.860464612759042 13.286241045177128 3 2.4948230728892513 4.578094293387968 4 0.9776248878646923 2.3919713152372744 5 0.4707992799658975 1.4398906816044716 6 0.3156093586373967 1.1583101177947486 7 0.20742579059949007 0.8881463205347141 8 0.17048571753692354 0.8342605657199808 9 0.1258439311515651 0.6927850587760664 >10 0.8993720462369239 10.984434000537348 >50 0.1136881237553413 4.949300403413067 >100 0.06341170249299766 6.524077804497416 >500 0.0027176443925570424 1.04338699727099 >1k 4.529407320928404E-4 0.27788559698959187 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1003 0.27692341673246934 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 958 0.2644991358222389 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 704 0.1943709724622716 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 548 0.15130013197347278 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 533 0.14715870500339598 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 521 0.1438455634273345 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 502 0.13859975593190388 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 484 0.13363004356781172 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 426 0.1176165259501814 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 407 0.11237071845475077 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 373 0.10298348398924333 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 367 0.1013269132012126 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 364 0.10049862780719723 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 2.7609513133845397E-4 0.0 14-15 0.0 0.0 0.0 2.7609513133845397E-4 0.0 16-17 0.0 0.0 0.0 5.521902626769079E-4 0.0 18-19 0.0 0.0 0.0 6.90237828346135E-4 0.0 20-21 0.0 0.0 0.0 0.002070713485038405 0.0 22-23 0.0 0.0 0.0 0.003313141576061448 0.0 24-25 0.0 0.0 0.0 0.004831664798422945 0.0 26-27 0.0 0.0 0.0 0.005107759929761398 0.0 28-29 0.0 0.0 0.0 0.006488235586453669 0.0 30-31 0.0 0.0 0.0 0.013528661435584243 0.0 32-33 0.0 0.0 0.0 0.027195370436837715 0.0 34-35 0.0 0.0 0.0 0.047212267458875634 0.0 36-37 0.0 0.0 0.0 0.07095644875398267 0.0 38-39 0.0 0.0 0.0 0.11361314654577381 0.0 40-41 0.0 0.0 0.0 0.1657951263687416 0.0 42-43 0.0 0.0 0.0 0.21701077323202483 0.0 44-45 0.0 0.0 0.0 0.2701590860146772 0.0 46-47 0.0 0.0 0.0 0.3251020171510296 0.0 48-49 0.0 0.0 0.0 0.38667123143950477 0.0 50-51 0.0 0.0 0.0 0.45279601539506453 0.0 52-53 0.0 0.0 0.0 0.5165739907342475 0.0 54-55 0.0 0.0 0.0 0.5868402016598839 0.0 56-57 0.0 0.0 0.0 0.6691165507987432 0.0 58-59 0.0 0.0 0.0 0.7618845149284638 0.0 60-61 0.0 0.0 0.0 0.8695616161504608 0.0 62-63 0.0 0.0 0.0 0.9730972904023811 0.0 64-65 0.0 0.0 0.0 1.0737339657752476 0.0 66-67 0.0 0.0 0.0 1.2030845348073131 0.0 68-69 0.0 0.0 0.0 1.3367145783751249 0.0 70-71 0.0 0.0 0.0 1.479593808842775 0.0 72-73 0.0 0.0 0.0 1.6337929396953015 0.0 74-75 0.0 0.0 0.0 1.7900627840328664 0.0 76-77 0.0 0.0 0.0 1.9544774347449159 0.0 78-79 0.0 0.0 0.0 2.1499527877325413 0.0 80-81 0.0 0.0 0.0 2.3628221339944893 0.0 82-83 0.0 0.0 0.0 2.5958464248441446 0.0 84-85 0.0 0.0 0.0 2.821968337410338 0.0 86-87 0.0 0.0 0.0 3.0780465717267544 0.0 88-89 0.0 0.0 0.0 3.3598016532576462 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 815 0.0 67.88681 1 CCGTGCG 130 0.0 54.79869 9 AACCGTG 125 0.0 53.191265 7 ACCGTGC 130 0.0 51.145443 8 AAACCGT 140 0.0 47.4922 6 GTATCAA 1640 0.0 45.660522 1 CCGGCCA 50 0.0016156576 37.99376 9 ATCAACG 2095 0.0 34.910736 3 TGGTATC 315 0.0 34.676846 2 AGAGCGT 55 0.0025793791 34.539783 8 TCAACGC 2145 0.0 34.096966 4 TATCAAC 2265 0.0 32.50018 2 CAACGCA 2295 0.0 31.868402 5 AACGCAG 2345 0.0 31.391432 6 GTCTAAT 350 0.0 31.34331 1 CTAATGT 365 0.0 31.227747 3 GTACATG 3010 0.0 30.582703 1 TCTAATG 365 0.0 29.92659 2 TACATGG 3075 0.0 29.653666 2 ACGCAGA 2520 0.0 29.211473 7 >>END_MODULE