##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224515_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 458894 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.14948768125101 34.0 33.0 34.0 31.0 34.0 2 33.26691349200469 34.0 33.0 34.0 31.0 34.0 3 33.38183109824927 34.0 34.0 34.0 31.0 34.0 4 36.60396518585991 37.0 37.0 37.0 35.0 37.0 5 36.63739338496472 37.0 37.0 37.0 35.0 37.0 6 36.67959485197017 37.0 37.0 37.0 36.0 37.0 7 36.653610637750766 37.0 37.0 37.0 35.0 37.0 8 36.64661773742956 37.0 37.0 37.0 35.0 37.0 9 38.480784233395944 39.0 39.0 39.0 37.0 39.0 10-11 38.507039752099615 39.0 39.0 39.0 37.0 39.0 12-13 38.477397830435784 39.0 39.0 39.0 37.0 39.0 14-15 40.042051105484056 41.0 40.0 41.0 38.0 41.0 16-17 40.048114597270825 41.0 40.0 41.0 38.0 41.0 18-19 40.055703495796415 41.0 40.0 41.0 38.0 41.0 20-21 40.053154976966354 41.0 40.0 41.0 38.0 41.0 22-23 39.960474532244916 41.0 40.0 41.0 38.0 41.0 24-25 39.901954481862916 41.0 40.0 41.0 38.0 41.0 26-27 39.81751014395481 41.0 40.0 41.0 37.0 41.0 28-29 39.777841941712026 41.0 40.0 41.0 37.0 41.0 30-31 39.68038479474563 41.0 40.0 41.0 37.0 41.0 32-33 39.59292995768086 41.0 40.0 41.0 36.0 41.0 34-35 39.48155347422281 41.0 39.5 41.0 36.0 41.0 36-37 39.316186308820775 41.0 39.0 41.0 35.0 41.0 38-39 39.15789485153434 41.0 39.0 41.0 35.0 41.0 40-41 38.980143562565644 41.0 39.0 41.0 35.0 41.0 42-43 38.82193600264985 40.5 38.0 41.0 35.0 41.0 44-45 38.48917614961189 40.0 38.0 41.0 35.0 41.0 46-47 38.15843092304541 40.0 37.0 41.0 34.5 41.0 48-49 37.95132753969327 40.0 37.0 41.0 34.0 41.0 50-51 37.70333780785977 40.0 36.0 41.0 34.0 41.0 52-53 37.383912188871506 39.0 35.5 41.0 33.5 41.0 54-55 37.11862107589117 39.0 35.0 41.0 33.0 41.0 56-57 36.833329701412524 38.5 35.0 41.0 33.0 41.0 58-59 36.520740083766626 37.0 35.0 41.0 33.0 41.0 60-61 36.235465052931616 37.0 35.0 40.0 33.0 41.0 62-63 36.01565285229269 36.0 35.0 40.0 32.5 41.0 64-65 35.73972202730914 36.0 35.0 40.0 32.0 41.0 66-67 35.48164499862713 35.0 35.0 39.0 32.0 41.0 68-69 35.24178786386399 35.0 35.0 39.0 31.0 41.0 70-71 34.98050312272551 35.0 35.0 39.0 31.0 41.0 72-73 34.72518816981699 35.0 35.0 37.5 31.0 40.0 74-75 34.45558560364703 35.0 35.0 37.0 31.0 39.5 76-77 32.69915274551421 34.5 32.0 35.5 27.5 38.0 78-79 34.07599358457509 35.0 34.0 36.0 31.0 39.0 80-81 34.07211796188227 35.0 35.0 36.0 31.0 38.0 82-83 33.90867825685234 35.0 35.0 36.0 31.0 37.0 84-85 33.743778519658136 35.0 35.0 35.0 31.0 37.0 86-87 33.59290489742729 35.0 34.0 35.0 31.0 36.5 88-89 33.47660243977912 35.0 34.0 35.0 31.0 36.0 90-91 33.33992054810044 35.0 34.0 35.0 30.0 36.0 92-93 33.24749288506714 35.0 34.0 35.0 30.0 36.0 94-95 33.154154336295534 35.0 34.0 35.0 30.0 35.5 96-97 33.11449702981517 35.0 34.0 35.0 30.0 35.0 98-99 33.09913618395534 35.0 34.0 35.0 30.0 35.0 100-101 32.22483841584331 34.5 32.5 35.0 26.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 7.0 14 8.0 15 37.0 16 111.0 17 216.0 18 569.0 19 926.0 20 1274.0 21 1861.0 22 2761.0 23 2380.0 24 1675.0 25 1529.0 26 1937.0 27 2674.0 28 3341.0 29 3799.0 30 4021.0 31 4533.0 32 5356.0 33 7095.0 34 12549.0 35 27128.0 36 78125.0 37 142425.0 38 116278.0 39 36249.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.72969955916666 18.90417675359299 12.949862321663872 23.416261365576478 2 16.409454035136655 19.302061042419382 38.34785375271849 25.94063116972547 3 19.701717607987902 27.11628393485206 28.33660932590097 24.845389131259072 4 12.915400942265535 16.561994709017767 38.920970856014684 31.60163349270202 5 13.278883576599391 38.72419338670804 34.04533508827747 13.951587948415103 6 29.05921628960065 36.99198507716379 19.3042401949034 14.644558438332163 7 26.075738623734456 31.279772670812868 22.971317995005382 19.673170710447295 8 26.985752701059507 33.131834366978 20.00658104050173 19.875831891460773 9 27.195823000518637 14.749375672813331 20.575775669326685 37.479025657341346 10-11 27.352830936991985 24.123544870928797 26.63610768499915 21.887516507080065 12-13 27.28113682026786 22.529494828871155 27.358169860577824 22.831198490283157 14-15 24.31291322178978 24.50576821662519 24.67290921214921 26.50840934943582 16-17 23.348311374740135 26.708891377965283 26.25791577139819 23.684881475896393 18-19 23.327827341390385 25.956321067610382 27.533591635541104 23.18225995545812 20-21 24.956498526343314 24.074265759409883 27.283078280860984 23.686157433385816 22-23 25.21971735837955 25.180056005317237 26.184556043453156 23.41567059285006 24-25 24.54956721843048 24.676503403851015 26.702797172319414 24.071132205399092 26-27 23.939845298425418 26.10880539396165 26.845375787100643 23.105973520512286 28-29 23.704652062347115 26.18764062695788 27.315162378168704 22.7925449325263 30-31 23.56917545149955 24.553948407834163 27.70624608427992 24.17063005638637 32-33 23.785828068852652 25.03459412106962 27.979071373936844 23.200506436140884 34-35 24.529122183068665 24.799129178407288 26.88127755367996 23.790471084844086 36-37 23.757815070746958 24.764158652746087 27.620078058092478 23.857948218414474 38-39 23.671261772871294 25.184901088268752 26.702244962889033 24.44159217597092 40-41 24.086826151573128 25.132056640531363 27.333218564635843 23.447898643259663 42-43 24.1237627861772 25.303773856271818 27.26337672752313 23.30908663002785 44-45 24.230774679119417 24.880762856199514 26.732330183097258 24.156132281583815 46-47 24.223715588277305 24.63861353210634 26.221331969603956 24.9163389100124 48-49 23.849231513503266 24.759473423856313 26.85398865520856 24.537306407431863 50-51 24.34429301755961 25.125628140703515 26.021150854009857 24.508927987727013 52-53 24.89847862303563 25.597987332572806 25.220557711102902 24.282976333288662 54-55 24.399970363526215 24.73305382070805 25.98998897348843 24.8769868422773 56-57 24.714211150859246 25.355581150303525 25.183089014877037 24.747118683960192 58-59 25.218735319091422 25.168595417867028 25.68481840090775 23.927850862133802 60-61 24.604587999877932 25.499169504012976 25.61709557461167 24.27914692149742 62-63 24.523201436497317 25.030290219527824 26.123679978382807 24.322828365592052 64-65 24.985508635981294 24.83885167380702 25.46198032661137 24.71365936360031 66-67 24.217357385365684 24.950206365740236 25.356618304009203 25.475817944884877 68-69 24.49487245420511 25.151777970511706 26.128909944344446 24.224439630938736 70-71 25.25452501013306 24.73011196485463 25.76390190327178 24.251461121740533 72-73 24.59903594294107 25.004903093089037 26.045230488958232 24.35083047501166 74-75 24.67704960186884 24.663865729340547 26.036840751894776 24.62224391689584 76-77 24.68429459590798 24.02117704998769 25.65543601667491 25.63909233742942 78-79 24.48514605507466 24.087864048048676 25.71937899352319 25.707610903353466 80-81 23.846415355849317 25.181422351233675 25.98719910040665 24.984963192510364 82-83 23.91920442200849 25.39625811611368 26.205499617007693 24.479037844870135 84-85 23.96189492448065 24.60823859364683 26.741543161853954 24.688323320018565 86-87 23.58442254638326 25.93659973763004 26.031610785933136 24.447366930053562 88-89 24.31814318775142 24.662231364977533 25.279040475578242 25.740584971692808 90-91 24.194258369035115 24.852907207328926 25.564727366232727 25.388107057403236 92-93 24.09913836310782 25.252672730521645 26.083365657428516 24.564823248942023 94-95 24.234463732365207 24.810522691514816 25.8905106625931 25.06450291352687 96-97 24.22247839370312 25.699290032120707 25.82829585917445 24.249935715001723 98-99 22.38392744293889 26.348023726612247 26.29964654146709 24.96840228898177 100-101 23.555739209884187 25.395177838204415 25.716270053271874 25.332812898639528 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.5 3 4.5 4 5.0 5 2.5 6 7.0 7 12.0 8 21.5 9 34.5 10 41.5 11 49.5 12 57.5 13 63.0 14 77.5 15 94.5 16 104.0 17 111.5 18 126.0 19 148.0 20 177.5 21 227.0 22 318.0 23 403.5 24 515.0 25 731.0 26 1081.0 27 1519.0 28 1997.0 29 2677.5 30 3340.0 31 3876.0 32 4686.0 33 5582.5 34 6374.0 35 7189.0 36 8212.0 37 9043.5 38 9314.5 39 9598.0 40 9903.5 41 9969.0 42 9989.5 43 10759.0 44 11747.0 45 12880.0 46 14281.0 47 15190.5 48 16482.0 49 19202.5 50 22862.0 51 22677.0 52 20413.5 53 22126.5 54 24439.5 55 23927.5 56 19811.0 57 16152.5 58 15382.5 59 15085.5 60 12833.0 61 9491.5 62 7757.5 63 5482.5 64 3134.5 65 2034.5 66 1682.5 67 1554.5 68 1213.0 69 755.0 70 459.0 71 333.5 72 257.0 73 215.5 74 175.0 75 131.0 76 95.5 77 61.0 78 39.0 79 28.0 80 22.5 81 17.5 82 8.5 83 3.5 84 2.0 85 1.5 86 0.5 87 0.5 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.44280378475203425 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 3.268728726023875E-4 22-23 0.0019612372356143247 24-25 4.358304968031833E-4 26-27 0.0022881101082167124 28-29 0.0025060253566183037 30-31 0.0014164491146103457 32-33 2.1791524840159164E-4 34-35 0.0037045592228270585 36-37 0.0010895762420079582 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008607652311862871 46-47 0.0757255488195531 48-49 0.0010895762420079582 50-51 0.0 52-53 1.0895762420079582E-4 54-55 0.0 56-57 0.0070822455730517285 58-59 0.03867995659128252 60-61 0.028764812789010094 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 2.1791524840159164E-4 78-79 0.005665796458441383 80-81 0.004358304968031833 82-83 0.0016343643630119375 84-85 0.0010895762420079582 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06602832026568227 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 458894.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.31306459706225 #Duplication Level Percentage of deduplicated Percentage of total 1 76.32369000733233 35.34783985595737 2 14.010975359097477 12.977824137474578 3 4.284310185794594 5.952586031656706 4 1.8156893134955152 3.3636054585645363 5 0.9308227260864135 2.1554626520826825 6 0.5417992867547075 1.5055431219667812 7 0.3438394426526272 1.1146980823012305 8 0.22420715322919713 0.8306976296501795 9 0.1447206127063022 0.6032209576314063 >10 1.0257046353463044 9.412868335217334 >50 0.16861884809220856 5.492509774795917 >100 0.16956349149876435 15.270047785613558 >500 0.013225007693496939 4.159467655728535 >1k 0.002833930220035059 1.813628521359205 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 2132 0.4645953095921934 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1421 0.30965756797866173 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1412 0.3076963307430474 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1184 0.2580116541074845 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1083 0.23600221401892377 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1059 0.23077224805728558 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 942 0.20527616399429932 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 897 0.1954699778162277 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 878 0.19132958809659747 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 876 0.19089375759979427 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 856 0.18653545263176247 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 844 0.18392046965094336 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 804 0.17520385971487967 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 796 0.17346053772766695 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 723 0.15755272459435077 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 712 0.15515565686193325 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 695 0.1514510976391062 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 689 0.15014360614869665 No Hit GTGCAGAAATCCACTGTTCGTCACGAAATCCTTCGCTTAATTGCCGCACT 688 0.14992569090029506 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 658 0.1433882334482473 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 653 0.14229865720623935 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 643 0.14011950472222345 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 622 0.13554328450579 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 619 0.13488953876058524 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 585 0.12748042031493112 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 567 0.12355794584370247 No Hit GCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGC 566 0.12334003059530088 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 560 0.12203253910489133 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 551 0.12007130186927699 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 533 0.11614882739804835 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 533 0.11614882739804835 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 511 0.11135469193321335 No Hit GGTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTC 508 0.11070094618800856 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 506 0.11026511569120537 No Hit GGATGGCACTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCT 500 0.10895762420079583 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 477 0.10394557348755921 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 477 0.10394557348755921 No Hit ACTTTGGCGCGACTGCGTGAACGCGACATTACCCTCACTTTTGCCACGGG 465 0.10133059050674012 No Hit GCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCGTAGCCCCTCCGATG 465 0.10133059050674012 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.1791524840159164E-4 0.0 18-19 0.0 0.0 0.0 4.358304968031833E-4 0.0 20-21 0.0 0.0 0.0 6.537457452047749E-4 0.0 22-23 0.0 0.0 0.0 7.627033694055708E-4 0.0 24-25 0.0 0.0 0.0 0.0019612372356143247 0.0 26-27 0.0 0.0 0.0 0.002288110108216712 0.0 28-29 0.0 0.0 0.0 0.004467262592232629 0.0 30-31 0.0 0.0 0.0 0.0070822455730517285 0.0 32-33 0.0 0.0 0.0 0.011985338662087541 0.0 34-35 0.0 0.0 0.0 0.019394457107741656 0.0 36-37 0.0 0.0 0.0 0.03148875339403 0.0 38-39 0.0 0.0 0.0 0.05175487149537802 0.0 40-41 0.0 0.0 0.0 0.078449489424573 0.0 42-43 0.0 0.0 0.0 0.10492619210536638 0.0 44-45 0.0 0.0 0.0 0.1331462167733725 0.0 46-47 0.0 0.0 0.0 0.16278269055598898 0.0 48-49 0.0 0.0 0.0 0.19982828278425957 0.0 50-51 0.0 0.0 0.0 0.24373820533718027 0.0 52-53 0.0 0.0 0.0 0.29396767009374714 0.0 54-55 0.0 0.0 0.0 0.33471782154484475 0.0 56-57 0.0 0.0 0.0 0.38679956591282516 0.0 58-59 0.0 0.0 0.0 0.43768277641459685 0.0 60-61 0.0 0.0 0.0 0.50382005430448 0.0 62-63 0.0 0.0 0.0 0.5757320862770051 0.0 64-65 0.0 0.0 0.0 0.6394722964344707 0.0 66-67 0.0 0.0 0.0 0.7089872606745784 0.0 68-69 0.0 0.0 0.0 0.7989862582644358 0.0 70-71 0.0 0.0 0.0 0.8950868828095377 0.0 72-73 0.0 0.0 0.0 0.9972891343098842 0.0 74-75 0.0 0.0 0.0 1.1096244448609047 0.0 76-77 0.0 0.0 0.0 1.2191268571827045 0.0 78-79 0.0 0.0 0.0 1.352817862077081 0.0 80-81 0.0 0.0 0.0 1.5019808496079703 0.0 82-83 0.0 0.0 0.0 1.6619306419347386 0.0 84-85 0.0 0.0 0.0 1.8297253832039644 0.0 86-87 0.0 0.0 0.0 2.000788853199214 0.0 88-89 0.0 0.0 0.0 2.2071545934355212 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 315 0.0 64.82172 9 ACCGTGC 320 0.0 62.324944 8 GGTATCA 635 0.0 60.87075 1 AAACCGT 335 0.0 59.53427 6 AACCGTG 350 0.0 56.982803 7 GTATCAA 1185 0.0 45.907524 1 TCCTAAC 45 9.4030134E-4 42.41748 1 GTCTAAT 700 0.0 40.22086 1 CAAAACC 510 0.0 40.036938 4 ATACAAA 515 0.0 37.06382 1 TCTAATG 760 0.0 36.863876 2 CTAATGT 755 0.0 36.479057 3 GTTATTA 795 0.0 35.83824 8 TGCGCGG 300 0.0 34.0314 12-13 TAATGTT 875 0.0 33.646988 4 ATCAACG 1650 0.0 32.232697 3 TGGTATC 310 0.0 32.167713 2 ATGTTAT 860 0.0 32.02522 6 TACAAAA 655 0.0 31.898773 2 CGTTAAT 60 0.0039543365 31.657114 2 >>END_MODULE