##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224513_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 128706 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.035662673068856 34.0 31.0 34.0 30.0 34.0 2 32.190869112551084 34.0 31.0 34.0 30.0 34.0 3 32.32838406911877 34.0 31.0 34.0 30.0 34.0 4 35.61263655152052 37.0 35.0 37.0 35.0 37.0 5 35.620390657778195 37.0 37.0 37.0 35.0 37.0 6 35.73564557984865 37.0 37.0 37.0 35.0 37.0 7 35.68519727130048 37.0 37.0 37.0 35.0 37.0 8 35.737308283996086 37.0 37.0 37.0 35.0 37.0 9 37.433717153823444 39.0 38.0 39.0 35.0 39.0 10-11 37.50944788898731 39.0 38.5 39.0 35.0 39.0 12-13 37.496060789706775 39.0 39.0 39.0 35.0 39.0 14-15 38.95113669914379 41.0 40.0 41.0 36.0 41.0 16-17 38.78744969154508 41.0 39.0 41.0 35.5 41.0 18-19 38.87953164576632 41.0 39.5 41.0 35.0 41.0 20-21 38.93620732522182 41.0 40.0 41.0 35.5 41.0 22-23 38.88853278013457 41.0 39.5 41.0 35.0 41.0 24-25 38.813664475626624 41.0 39.0 41.0 35.0 41.0 26-27 38.612150948673715 41.0 39.0 41.0 35.0 41.0 28-29 38.5282698553292 41.0 39.0 41.0 35.0 41.0 30-31 38.38030472549842 40.5 38.5 41.0 34.0 41.0 32-33 38.119613693223314 40.0 38.0 41.0 34.0 41.0 34-35 38.082890463537055 40.0 38.0 41.0 34.0 41.0 36-37 38.015978276071046 40.0 38.0 41.0 33.5 41.0 38-39 37.83142588535111 40.0 38.0 41.0 33.0 41.0 40-41 37.67195779528538 40.0 37.0 41.0 33.0 41.0 42-43 37.44593492144888 40.0 37.0 41.0 32.0 41.0 44-45 37.13747610833994 40.0 36.0 41.0 31.0 41.0 46-47 36.802643233415694 40.0 36.0 41.0 30.0 41.0 48-49 36.45024707472845 39.5 35.0 41.0 29.5 41.0 50-51 35.077847963575906 38.0 34.0 40.0 27.0 40.5 52-53 35.33887309060961 38.0 34.5 39.5 27.5 40.5 54-55 35.691020620639286 38.0 35.0 40.5 28.0 41.0 56-57 35.459061737603534 37.0 35.0 41.0 28.0 41.0 58-59 35.252804842043105 37.0 35.0 40.0 28.0 41.0 60-61 34.96479185119575 36.0 35.0 40.0 27.0 41.0 62-63 34.6845873541249 35.5 35.0 40.0 26.5 41.0 64-65 34.41928115239383 35.0 34.0 39.5 26.0 41.0 66-67 34.19544543377931 35.0 34.0 39.0 26.0 41.0 68-69 33.90497335011577 35.0 34.0 39.0 26.0 41.0 70-71 33.63657482945628 35.0 34.0 37.5 25.0 41.0 72-73 33.359633583515915 35.0 34.0 37.0 25.0 40.0 74-75 33.13025033797958 35.0 34.0 36.5 24.5 39.5 76-77 32.85963358351592 35.0 33.0 36.0 24.0 39.0 78-79 32.72478750019424 35.0 33.0 36.0 24.0 39.0 80-81 32.480754587975696 35.0 33.0 35.0 24.0 37.0 82-83 32.274656970149024 35.0 33.0 35.0 23.5 37.0 84-85 32.10245443102886 35.0 33.0 35.0 23.0 36.5 86-87 31.930655913477228 35.0 33.0 35.0 23.0 36.0 88-89 31.807044737619073 35.0 33.0 35.0 23.0 36.0 90-91 31.636027069445092 35.0 33.0 35.0 21.5 36.0 92-93 31.50292527154911 35.0 32.5 35.0 20.0 35.5 94-95 31.382122822556838 35.0 32.0 35.0 20.0 35.0 96-97 31.25217550075366 35.0 32.0 35.0 20.0 35.0 98-99 31.19462962099669 35.0 32.0 35.0 20.0 35.0 100-101 29.963502090034652 34.0 29.5 35.0 16.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 68.0 8 197.0 9 102.0 10 109.0 11 252.0 12 377.0 13 386.0 14 363.0 15 366.0 16 397.0 17 423.0 18 523.0 19 627.0 20 844.0 21 1184.0 22 1495.0 23 1269.0 24 1033.0 25 950.0 26 952.0 27 879.0 28 1020.0 29 1082.0 30 1322.0 31 1694.0 32 2187.0 33 3061.0 34 5418.0 35 10088.0 36 22764.0 37 33782.0 38 25806.0 39 7679.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.086367880485525 18.773731714908184 12.515561780267662 23.624338624338627 2 17.272699019470732 19.06204838935248 36.85919848336519 26.8060541078116 3 21.723151989806226 25.216384628533245 27.954407719919814 25.10605566174071 4 13.481888956225818 15.981383929265148 37.24457290258418 33.29215421192485 5 13.331934797134554 38.81948005531988 33.72181561077184 14.12676953677373 6 30.193619567075352 36.43808369462185 18.00226873650024 15.36602800180256 7 26.621136543750872 31.042841825555918 21.242210930337357 21.09381070035585 8 27.29631874193899 32.71020776032197 19.581060712010316 20.412412785728716 9 27.060898481811257 14.510590026882975 20.254688981088684 38.17382251021708 10-11 27.765993815362144 23.836107096794244 25.864373067300672 22.533526020542944 12-13 27.654887884014734 22.143101331717247 26.55936786163815 23.642642922629868 14-15 24.661138140612128 24.14779351188348 24.210747205944074 26.98032114156032 16-17 23.34359596336552 26.907916219620283 26.0122685077203 23.736219309293897 18-19 23.522623511355466 25.502690731062888 27.295863850950987 23.678821906630663 20-21 24.885460586395165 23.46280140672664 27.71834379311015 23.933394213768043 22-23 24.687490282658043 25.13798625579153 26.556329487857212 23.61819397369321 24-25 23.75142788315836 24.586788098253905 27.306565542751017 24.355218475836722 26-27 23.6298230074744 25.859322797693967 27.208133264960455 23.302720929871178 28-29 23.340015228505276 26.27888365732755 27.532515966621602 22.84858514754557 30-31 23.41887713082529 24.77351483225335 27.70189423958479 24.105713797336563 32-33 23.376921044861934 25.05904930617065 27.911286187124144 23.65274346184327 34-35 24.00354295837024 24.782061442357 27.32040464314018 23.893990956132583 36-37 23.432206024058935 24.621942121786702 28.224177053868395 23.72167480028597 38-39 23.642692587110485 25.029234313508393 26.89362594841552 24.434447150965607 40-41 24.188529271220617 24.892872266446002 27.478312218583312 23.440286243750073 42-43 24.148326567083 24.961830578271595 27.506847186340593 23.38299566830481 44-45 23.87387037368 24.6948163458774 27.183685204323467 24.24762807611914 46-47 24.057153512656754 24.570338601153015 26.804500178701847 24.568007707488384 48-49 23.484142153434963 25.259894643606355 26.722141935884885 24.533821267073797 50-51 23.591363262007985 25.90089040137989 26.00500365173341 24.50274268487872 52-53 24.38697496620204 25.945954345562754 25.03807126318897 24.62899942504623 54-55 24.11542585427253 25.138688173045548 25.63400307677964 25.111882895902287 56-57 24.301120382888133 25.82474787500194 25.130918527496775 24.74321321461315 58-59 24.865862423995182 25.856596149736777 25.791712803776445 23.485828622491596 60-61 24.452085397361927 26.2210307515978 25.2738116051829 24.053072245857372 62-63 24.361689313371592 25.439172517767012 25.83278610812134 24.366352060740056 64-65 25.405634383027675 24.567744342493384 25.31352865964798 24.713092614830963 66-67 23.861530392213997 25.255551022786875 25.15725469627212 25.725663888727002 68-69 24.037729398784826 25.54737152891085 26.228380961260545 24.186518111043775 70-71 24.74360169689059 24.81352850682952 25.87253119512688 24.570338601153015 72-73 24.350069149845385 25.117710130063863 26.234208195422127 24.298012524668625 74-75 24.456513293863534 25.13208397432909 26.062499028794306 24.348903703013068 76-77 24.616567992168196 24.389305859866674 25.405963979923236 25.588162168041894 78-79 24.43526641748712 23.990395449494518 25.982795732346975 25.591542400671386 80-81 23.942616387988462 25.606523479707405 25.660548961078334 24.790311171225795 82-83 23.82344139263186 25.60737202532482 25.938895517631376 24.630291064411942 84-85 23.846844291437254 24.724995045830923 26.78942644321745 24.638734219514376 86-87 23.537436646870432 26.490936227107365 25.65607412704829 24.315552998973914 88-89 24.428364913807844 24.96308271027311 25.280182798874606 25.32836957704444 90-91 23.66905971749569 25.104501732630958 25.800661973800754 25.4257765760726 92-93 23.58958221642075 25.309821837874797 26.485008119468855 24.615587826235597 94-95 24.418053548397122 24.86675057883859 26.025204730160212 24.68999114260407 96-97 24.44291641415319 25.47511382530729 25.94867372150482 24.1332960390347 98-99 22.847119975447825 26.579672197380845 25.90565282757924 24.66755499959209 100-101 23.852365999253824 25.68710359408034 25.403401318244 25.05712908842184 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7.0 1 5.5 2 3.0 3 3.0 4 4.5 5 4.5 6 5.5 7 14.0 8 21.0 9 30.0 10 33.5 11 29.5 12 39.0 13 53.5 14 61.0 15 61.5 16 56.5 17 62.5 18 80.5 19 92.0 20 99.5 21 115.0 22 155.5 23 205.0 24 291.5 25 414.0 26 522.5 27 651.5 28 803.0 29 923.0 30 1083.0 31 1296.5 32 1452.5 33 1567.0 34 1741.0 35 1902.0 36 2033.0 37 2118.0 38 2188.5 39 2332.0 40 2436.5 41 2514.5 42 2527.5 43 2578.5 44 2825.0 45 3332.5 46 3935.5 47 4137.0 48 4409.5 49 5063.0 50 5915.5 51 6090.5 52 5856.0 53 6422.0 54 7066.5 55 7022.5 56 5876.0 57 4853.0 58 4518.5 59 4294.5 60 3678.5 61 2830.0 62 2334.0 63 1642.5 64 982.5 65 667.0 66 536.5 67 487.5 68 419.0 69 278.5 70 161.5 71 112.5 72 84.0 73 63.0 74 55.5 75 45.5 76 29.0 77 18.5 78 12.5 79 7.5 80 4.5 81 2.5 82 3.5 83 3.5 84 1.5 85 2.0 86 2.5 87 2.5 88 2.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14451540720712322 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03107858219508026 16-17 0.06526502260966854 18-19 0.018258667039609655 20-21 0.029913135362764753 22-23 0.05438751884139046 24-25 0.014762326542663124 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.017093220207294143 38-39 0.0034963404969465296 40-41 0.0034963404969465296 42-43 0.0027193759420695227 44-45 0.010100539213401085 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.010489021490839589 60-61 0.010489021490839589 62-63 0.020589560704240673 64-65 0.03845974546641182 66-67 0.010489021490839589 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.013208397432909112 80-81 0.048948766957251415 82-83 0.04467546190542788 84-85 0.020589560704240673 86-87 0.048171802402374404 88-89 0.03107858219508026 90-91 0.0 92-93 0.0023308936646310196 94-95 0.0 96-97 0.0 98-99 3.8848227743850327E-4 100-101 0.03884822774385033 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 128706.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.69020869267944 #Duplication Level Percentage of deduplicated Percentage of total 1 86.90285771861107 53.61055428651345 2 8.498847592538949 10.485913632620079 3 1.7821383140845601 3.2982145354528924 4 0.625952467915213 1.5446055350954888 5 0.35516820111084524 1.0955200223765793 6 0.24307610927089765 0.8997249545475735 7 0.14357863449161828 0.6200177147918512 8 0.11712993866421491 0.5780616288284929 9 0.11964886207634856 0.6643046944198405 >10 0.9886774392624592 12.953553058909453 >50 0.1536543281401529 6.5389336938448865 >100 0.06927039383367549 7.710596242599413 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 463 0.359734588908054 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 463 0.359734588908054 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 453 0.3519649433592839 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 367 0.2851459916398614 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 335 0.2602831258837972 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 317 0.24629776389601107 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 316 0.24552079934113408 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 312 0.24241294112162604 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 252 0.19579506782900566 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 249 0.1934641741643746 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 234 0.18180970584121953 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 233 0.1810327412863425 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 224 0.17404006029244945 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 201 0.1561698755302783 No Hit GCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGC 190 0.14762326542663123 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 189 0.14684630087175424 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 187 0.14529237176200022 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 185 0.1437384426522462 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 180 0.13985361987786118 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 179 0.13907665532298416 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 179 0.13907665532298416 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 174 0.13519183254859915 No Hit CTTCGAGGCAATCCGTGGCGGAAAAACACAAATGTGCACGCTCGCCTAAT 155 0.12042950600593601 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 153 0.11887557689618199 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 149 0.11576771867667396 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 148 0.11499075412179696 No Hit GCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCGTAGCCCCTCCGATG 146 0.11343682501204295 No Hit CGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAAT 145 0.11265986045716593 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 144 0.11188289590228895 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 140 0.10877503768278092 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 139 0.1079980731279039 No Hit ACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCG 136 0.10566717946327289 No Hit GCCTTTGGTGATGCGATGAACGATCGCGAAATGTTAGTCAGCGTCGGTAG 129 0.10022842757913383 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 3.8848227743850327E-4 0.0 22-23 0.0 0.0 0.0 7.769645548770065E-4 0.0 24-25 0.0 0.0 0.0 7.769645548770065E-4 0.0 26-27 0.0 0.0 0.0 0.001553929109754013 0.0 28-29 0.0 0.0 0.0 0.005438751884139045 0.0 30-31 0.0 0.0 0.0 0.013208397432909112 0.0 32-33 0.0 0.0 0.0 0.022143489813994686 0.0 34-35 0.0 0.0 0.0 0.04428697962798937 0.0 36-37 0.0 0.0 0.0 0.07420011499075413 0.0 38-39 0.0 0.0 0.0 0.12159495283825152 0.0 40-41 0.0 0.0 0.0 0.16898979068574893 0.0 42-43 0.0 0.0 0.0 0.2136652525911768 0.0 44-45 0.0 0.0 0.0 0.26494491321305924 0.0 46-47 0.0 0.0 0.0 0.3212748434416422 0.0 48-49 0.0 0.0 0.0 0.38382049010924124 0.0 50-51 0.0 0.0 0.0 0.44481220766708623 0.0 52-53 0.0 0.0 0.0 0.5135735707737014 0.0 54-55 0.0 0.0 0.0 0.5710689478345998 0.0 56-57 0.0 0.0 0.0 0.6534271906515625 0.0 58-59 0.0 0.0 0.0 0.7555980296178888 0.0 60-61 0.0 0.0 0.0 0.8445604711513062 0.0 62-63 0.0 0.0 0.0 0.940904075956055 0.0 64-65 0.0 0.0 0.0 1.0422979503675043 0.0 66-67 0.0 0.0 0.0 1.1518499526051622 0.0 68-69 0.0 0.0 0.0 1.2850993737665688 0.0 70-71 0.0 0.0 0.0 1.435053532857831 0.0 72-73 0.0 0.0 0.0 1.5811228691747083 0.0 74-75 0.0 0.0 0.0 1.7295230991562165 0.0 76-77 0.0 0.0 0.0 1.9210448619333986 0.0 78-79 0.0 0.0 0.0 2.1005236741099873 0.0 80-81 0.0 0.0 0.0 2.306419281152394 0.0 82-83 0.0 0.0 0.0 2.539508647615496 0.0 84-85 0.0 0.0 0.0 2.7555047938713035 0.0 86-87 0.0 0.0 0.0 2.997140770438053 0.0 88-89 0.0 0.0 0.0 3.2698553291998818 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTGTC 20 0.002073377 71.219696 2 ACCGTGA 20 0.002073377 71.219696 8 GGTATCA 250 0.0 66.60109 1 CCGTGCG 70 1.8189894E-11 61.09293 9 ACCGTGC 80 1.8189894E-12 59.349747 8 AACCGTG 75 3.6379788E-11 56.97576 7 AAACCGT 75 3.6379788E-11 56.97576 6 TAATAGT 25 0.0050196215 56.975758 4 GTGCTAC 40 5.330149E-4 47.57221 1 GTAGAGC 40 5.3815293E-4 47.479797 3 GTATCAA 485 0.0 45.12003 1 CACCGTG 50 0.0016138577 37.98384 7 CAAAACC 125 1.3278623E-10 37.983837 4 GCCCATA 140 1.0913936E-11 37.378162 1 ATACAAA 140 1.0913936E-11 37.378162 1 CCCATAA 140 1.0913936E-11 37.305557 2 ATCAACG 610 0.0 36.582794 3 TCAACGC 640 0.0 34.126102 4 TGGTATC 70 2.0483644E-4 33.914143 2 CGGCTTA 65 8.205461E-9 32.89619 16-17 >>END_MODULE