##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224513_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 128706 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.12124531878856 34.0 33.0 34.0 31.0 34.0 2 33.24505462060821 34.0 33.0 34.0 31.0 34.0 3 33.360503783817386 34.0 34.0 34.0 31.0 34.0 4 36.58004288844343 37.0 37.0 37.0 35.0 37.0 5 36.62239522632977 37.0 37.0 37.0 35.0 37.0 6 36.66724939008282 37.0 37.0 37.0 35.0 37.0 7 36.647786427983156 37.0 37.0 37.0 35.0 37.0 8 36.64030425931969 37.0 37.0 37.0 35.0 37.0 9 38.474624337637714 39.0 39.0 39.0 37.0 39.0 10-11 38.50576896181997 39.0 39.0 39.0 37.5 39.0 12-13 38.48408388109334 39.0 39.0 39.0 37.0 39.0 14-15 40.05531599148446 41.0 40.0 41.0 38.0 41.0 16-17 40.05253057355523 41.0 40.0 41.0 38.0 41.0 18-19 40.06760368591985 41.0 40.0 41.0 38.0 41.0 20-21 40.06916538467515 41.0 40.0 41.0 38.0 41.0 22-23 39.98350115767718 41.0 40.0 41.0 38.0 41.0 24-25 39.93679781828353 41.0 40.0 41.0 38.0 41.0 26-27 39.84199260329744 41.0 40.0 41.0 37.5 41.0 28-29 39.79408496884372 41.0 40.0 41.0 37.0 41.0 30-31 39.67640203253927 41.0 40.0 41.0 37.0 41.0 32-33 39.549578108246706 41.0 40.0 41.0 35.5 41.0 34-35 39.425955277920224 41.0 39.5 41.0 35.0 41.0 36-37 39.26166223796871 41.0 39.0 41.0 35.0 41.0 38-39 39.080730502074495 41.0 39.0 41.0 35.0 41.0 40-41 38.88400696160241 41.0 39.0 41.0 35.0 41.0 42-43 38.69687116373751 40.5 38.0 41.0 35.0 41.0 44-45 38.319693720572474 40.0 37.5 41.0 35.0 41.0 46-47 37.94197240221901 40.0 37.0 41.0 34.0 41.0 48-49 37.68609855018414 40.0 36.5 41.0 34.0 41.0 50-51 37.42417602908955 40.0 36.0 41.0 33.5 41.0 52-53 37.07338430220813 39.0 35.0 41.0 33.0 41.0 54-55 36.8044924090563 39.0 35.0 41.0 33.0 41.0 56-57 36.50543875188414 38.0 35.0 41.0 33.0 41.0 58-59 36.192489083648 37.0 35.0 40.5 32.0 41.0 60-61 35.894056998119744 36.5 35.0 40.0 32.0 41.0 62-63 35.675213276770315 36.0 35.0 40.0 31.5 41.0 64-65 35.40631361397293 35.5 35.0 39.5 31.0 41.0 66-67 35.150952558544276 35.0 35.0 39.0 31.0 41.0 68-69 34.902514257299586 35.0 35.0 39.0 31.0 41.0 70-71 34.636846767050486 35.0 35.0 38.5 30.5 41.0 72-73 34.383144530946495 35.0 35.0 37.0 30.0 40.0 74-75 34.11239957733128 35.0 34.5 37.0 30.0 39.5 76-77 32.36302503379795 34.5 32.0 35.5 27.0 38.0 78-79 33.71594952838252 35.0 34.0 36.0 30.0 39.0 80-81 33.71111680885117 35.0 35.0 36.0 30.0 37.5 82-83 33.580439140366416 35.0 35.0 35.0 30.0 37.0 84-85 33.422894037574004 35.0 34.0 35.0 30.0 37.0 86-87 33.279167249390085 35.0 34.0 35.0 30.0 36.0 88-89 33.15429739095302 35.0 34.0 35.0 29.5 36.0 90-91 33.01864326449427 35.0 34.0 35.0 29.0 36.0 92-93 32.930407284819665 35.0 34.0 35.0 29.0 36.0 94-95 32.83559430018802 35.0 34.0 35.0 29.0 35.5 96-97 32.809569872422415 35.0 34.0 35.0 29.0 35.0 98-99 32.789722312868086 35.0 34.0 35.0 29.0 35.0 100-101 31.926642891551285 34.5 32.5 35.0 26.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 5.0 15 13.0 16 36.0 17 87.0 18 203.0 19 299.0 20 476.0 21 762.0 22 1120.0 23 1034.0 24 698.0 25 531.0 26 617.0 27 791.0 28 916.0 29 1043.0 30 1157.0 31 1309.0 32 1520.0 33 1949.0 34 3333.0 35 7311.0 36 21724.0 37 40434.0 38 31414.0 39 9915.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.302208137873976 18.219283935777455 12.445655143345535 23.032852783003037 2 17.197333457647662 19.2640591736205 37.33547775550479 26.203129613227045 3 21.741022174568396 25.465790250648766 27.804453560828556 24.988734013954282 4 13.711093499914535 16.27896135378304 37.553027830870356 32.45691731543207 5 13.28143210106755 38.376610259039985 33.97432909110687 14.367628548785605 6 30.29540192376424 35.702298261153324 18.686774509346886 15.315525305735553 7 26.5729647413485 31.004770562366947 21.60971516479418 20.812549531490372 8 27.029819899616182 32.66669774524886 19.30601525958386 20.9974670955511 9 27.049244013488106 14.45387161437695 20.347924727673924 38.14895964446102 10-11 27.70616754463661 23.893990956132583 25.98052926825478 22.419312230976026 12-13 27.73297282177987 22.359874442527932 26.571799294516186 23.335353441176014 14-15 24.521778316473203 24.44485882554038 24.64415023386633 26.38921262412009 16-17 23.376921044861934 26.753609000357404 26.147965129830773 23.721504824949886 18-19 23.167529097322582 25.596320295868104 27.865445278386403 23.37070532842292 20-21 24.437866144546486 24.02957127095862 28.087268658803787 23.44529392569111 22-23 24.58334304561665 25.091878200197353 27.074737962596057 23.25004079158994 24-25 24.056858487011045 24.23556102886046 27.715987273271146 23.991593210857346 26-27 23.607636244969 25.835651349629373 27.66934468772824 22.887367717673385 28-29 23.37176956906867 25.904054453060652 28.253352810455485 22.470823167415187 30-31 23.318052911697293 24.54877432889165 28.44644730196962 23.686725457441433 32-33 23.432085528258202 25.116156200954116 28.588799278976897 22.862958991810796 34-35 24.307608632310952 24.480876439851595 27.655251451991997 23.55626347584546 36-37 23.231601193436102 24.454562406762808 28.52436598707111 23.789470412729983 38-39 23.583982098736655 25.011265986045718 27.33633241651516 24.06841949870247 40-41 23.879228629589917 25.022143489814 27.77182104952372 23.326806831072368 42-43 23.776669308346154 25.144515407207123 27.767547744471898 23.311267539974825 44-45 23.819199732700312 24.838668319158938 27.383066098395815 23.95906584974494 46-47 23.87043098957321 24.714060228129785 26.95103840262497 24.464470379672036 48-49 23.41176881927205 24.822752895197915 27.338204957868605 24.427273327661425 50-51 23.981010986278804 25.443258278557334 26.257517132068436 24.318213603095426 52-53 24.420772924339193 26.210899258775815 25.35041101424953 24.017916802635465 54-55 24.113871925162776 25.026028312588377 26.173993442419157 24.68610631982969 56-57 24.64918414918415 25.200854700854702 25.716394716394714 24.433566433566433 58-59 24.991353481341008 25.52763194198866 25.72349016239911 23.757524414271224 60-61 24.567811527357364 25.879239799030902 25.628999856228607 23.923948817383128 62-63 24.542367877177444 25.1402421021553 26.137476108339936 24.17991391232732 64-65 24.790219570183208 24.704753469146738 25.896617096328068 24.608409864341986 66-67 23.916911410501456 24.996892141780492 25.655369602038753 25.4308268456793 68-69 24.15388559973894 25.198125961493638 26.22915792581542 24.418830512952 70-71 24.948720339378117 24.90676425341476 25.788230540922726 24.3562848662844 72-73 24.295681631003994 25.21832703992044 25.954500955666404 24.531490373409166 74-75 24.418830512952 24.786334747408823 26.140972448836884 24.653862290802294 76-77 24.48331857100679 23.997327241931224 26.08192314266623 25.43743104439575 78-79 24.23660859971096 24.13054964180821 25.937436869667913 25.695404888812917 80-81 23.583549595188884 25.262233687122187 26.139842426691118 25.01437429099781 82-83 23.52472708907968 25.2437745231343 26.609300337982205 24.622198049803814 84-85 23.880875331668033 24.745251756917924 26.87530835900564 24.498564552408407 86-87 23.14111230245676 26.149130576663094 26.259848025733067 24.449909095147078 88-89 24.064534675928083 24.441362485043435 25.727627305642315 25.766475533386167 90-91 23.662455518779232 24.972029276024426 25.8970055786055 25.468509626590834 92-93 23.749956295574005 25.391300294082225 26.226540435334933 24.632202975008838 94-95 23.64575078084938 24.929684707783633 26.203518095504485 25.221046415862507 96-97 24.162820692120025 25.598651189532735 25.856991904029336 24.381536214317904 98-99 22.075893897720388 26.506145789629077 26.423787546812115 24.99417276583842 100-101 23.239017791546974 25.603968016419376 25.708143996081738 25.448870195951905 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8.0 1 5.0 2 3.0 3 6.0 4 7.5 5 5.0 6 5.0 7 13.0 8 25.5 9 36.0 10 34.5 11 38.0 12 46.5 13 50.0 14 58.0 15 61.5 16 62.5 17 73.5 18 86.0 19 98.0 20 117.5 21 127.5 22 150.0 23 206.5 24 277.0 25 396.0 26 533.0 27 667.0 28 802.0 29 949.0 30 1115.0 31 1227.0 32 1402.0 33 1651.5 34 1809.0 35 1927.5 36 2037.0 37 2112.5 38 2243.5 39 2393.5 40 2479.0 41 2548.5 42 2640.0 43 2740.0 44 2958.5 45 3419.5 46 3838.0 47 4225.5 48 4511.0 49 5123.5 50 6189.0 51 6268.0 52 5759.5 53 6241.5 54 6904.0 55 6739.0 56 5734.0 57 4863.5 58 4648.0 59 4468.0 60 3722.5 61 2718.5 62 2234.5 63 1571.5 64 866.5 65 567.5 66 446.0 67 397.5 68 348.0 69 236.0 70 123.0 71 81.0 72 54.0 73 51.0 74 49.0 75 32.0 76 21.0 77 11.5 78 4.5 79 1.5 80 0.5 81 1.0 82 2.0 83 1.5 84 1.0 85 1.0 86 0.5 87 0.5 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.45763212282255683 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0023308936646310196 24-25 3.8848227743850327E-4 26-27 0.003107858219508026 28-29 0.006215716439016052 30-31 7.769645548770065E-4 32-33 0.0 34-35 0.0027193759420695227 36-37 0.001553929109754013 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008935092381085575 46-47 0.07381163271331562 48-49 0.0011654468323155098 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.004661787329262039 58-59 0.032244029027395774 60-61 0.022920454368871693 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.003107858219508026 80-81 0.003107858219508026 82-83 7.769645548770065E-4 84-85 3.8848227743850327E-4 86-87 0.0 88-89 0.0 90-91 0.0 92-93 3.8848227743850327E-4 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.060214753002968004 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 128706.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.55277920221279 #Duplication Level Percentage of deduplicated Percentage of total 1 85.67085899175451 51.01937749599863 2 9.45882475733222 11.265986045716595 3 1.8004383676025466 3.2166332571908067 4 0.6940820373656195 1.6533805727782698 5 0.41096962738753784 1.2237191739312852 6 0.2596284312702223 0.9276956785231457 7 0.19309049159795427 0.8049352788525788 8 0.13959920676338589 0.6650816589747176 9 0.08871725289635737 0.47550230758472795 >10 1.045037052499739 13.57512470281106 >50 0.15655985805239536 6.532717977405871 >100 0.08219392547750756 8.639845850232312 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 471 0.36595030534707007 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 381 0.2960234954081395 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 360 0.27970723975572237 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 347 0.2696067005423213 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 338 0.26261401954842817 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 337 0.2618370549935512 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 332 0.2579522322191662 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 304 0.23619722468260998 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 272 0.21133435892654578 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 266 0.20667257159728372 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 251 0.19501810327412863 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 236 0.18336363495097355 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 235 0.18258667039609652 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 230 0.1787018476217115 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 223 0.17326309573757245 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 215 0.1670473792985564 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 202 0.15694684008515533 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 194 0.15073112364613928 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 184 0.1429614780973692 No Hit GCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGA 170 0.1320839743290911 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 166 0.1289761161095831 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 165 0.12819915155470607 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 162 0.12586825789007505 No Hit GCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGC 160 0.12431432878032105 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 160 0.12431432878032105 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 159 0.12353736422544404 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 158 0.12276039967056704 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 155 0.12042950600593601 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 154 0.11965254145105901 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 153 0.11887557689618199 No Hit CTGCTGGGCGATCTGTTGCGCGAAGTGGTATGGCCGACAGATGTGTCCAC 150 0.11654468323155098 No Hit GTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTG 148 0.11499075412179696 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 148 0.11499075412179696 No Hit GTTCAATGGTCATTGCGCTCGCCATATACACCAGATTCAGACAGCCAATC 143 0.11110593134741192 No Hit GCCTTTGGTGATGCGATGAACGATCGCGAAATGTTAGTCAGCGTCGGTAG 142 0.11032896679253493 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 141 0.10955200223765792 No Hit GTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGAC 140 0.10877503768278092 No Hit GCATTGACGGTGCTGACCCAACATTTAGGTTTATCGTTGCGCGATTGCAC 138 0.1072211085730269 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 134 0.10411325035351887 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 7.769645548770065E-4 0.0 20-21 0.0 0.0 0.0 0.0011654468323155098 0.0 22-23 0.0 0.0 0.0 0.001553929109754013 0.0 24-25 0.0 0.0 0.0 0.001553929109754013 0.0 26-27 0.0 0.0 0.0 0.0023308936646310196 0.0 28-29 0.0 0.0 0.0 0.006992680993893059 0.0 30-31 0.0 0.0 0.0 0.014762326542663124 0.0 32-33 0.0 0.0 0.0 0.0236974189237487 0.0 34-35 0.0 0.0 0.0 0.04584090873774338 0.0 36-37 0.0 0.0 0.0 0.07614252637794663 0.0 38-39 0.0 0.0 0.0 0.12470281105775954 0.0 40-41 0.0 0.0 0.0 0.17365157801501097 0.0 42-43 0.0 0.0 0.0 0.21949248675275435 0.0 44-45 0.0 0.0 0.0 0.2723260764843908 0.0 46-47 0.0 0.0 0.0 0.3309869003776048 0.0 48-49 0.0 0.0 0.0 0.3927555824903268 0.0 50-51 0.0 0.0 0.0 0.4541357823256103 0.0 52-53 0.0 0.0 0.0 0.5236741099871023 0.0 54-55 0.0 0.0 0.0 0.5811694870480009 0.0 56-57 0.0 0.0 0.0 0.6643046944198405 0.0 58-59 0.0 0.0 0.0 0.7715258029928674 0.0 60-61 0.0 0.0 0.0 0.8624306559134772 0.0 62-63 0.0 0.0 0.0 0.9595512252731031 0.0 64-65 0.0 0.0 0.0 1.0621105465168679 0.0 66-67 0.0 0.0 0.0 1.1743819246965952 0.0 68-69 0.0 0.0 0.0 1.3095737572451944 0.0 70-71 0.0 0.0 0.0 1.4603048808913337 0.0 72-73 0.0 0.0 0.0 1.6083166285954036 0.0 74-75 0.0 0.0 0.0 1.7633210572933664 0.0 76-77 0.0 0.0 0.0 1.9548428200705483 0.0 78-79 0.0 0.0 0.0 2.138206455021522 0.0 80-81 0.0 0.0 0.0 2.346044473451121 0.0 82-83 0.0 0.0 0.0 2.5810762513014156 0.0 84-85 0.0 0.0 0.0 2.799791773499293 0.0 86-87 0.0 0.0 0.0 3.0472549842276195 0.0 88-89 0.0 0.0 0.0 3.3257967771510266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 265 0.0 63.01655 1 TTATACT 25 0.0050153155 56.988113 4 AACCGTG 45 1.5102532E-5 52.76677 7 CCGTGCG 45 1.5102532E-5 52.76677 9 ACCGTGC 55 8.1452527E-7 51.807377 8 AAACCGT 50 2.8163822E-5 47.490093 6 AAGTGAC 45 9.6030487E-4 42.213417 7 GTATCAA 455 0.0 39.847824 1 GTGCGCG 45 5.684378E-7 36.93674 10-11 ACATTGG 60 0.0038528424 31.808352 1 TTGTACA 60 0.0039420645 31.660065 4 ATCAACG 565 0.0 31.099707 3 TCAACGC 580 0.0 30.295403 4 AGCTGTG 80 4.4772108E-4 29.681307 7 GTGTAGC 65 0.0056992583 29.361555 1 GTACATG 645 0.0 28.109707 1 ACATGGG 650 0.0 27.763441 3 CATGGGA 190 3.8926373E-10 27.494265 4 GAGTACT 380 0.0 27.494265 12-13 TACATGG 640 0.0 27.455208 2 >>END_MODULE