##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224508_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 963650 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.195334405645205 34.0 31.0 34.0 31.0 34.0 2 32.358402947128106 34.0 31.0 34.0 31.0 34.0 3 32.495773361697715 34.0 31.0 34.0 31.0 34.0 4 35.73156540237638 37.0 37.0 37.0 35.0 37.0 5 35.75683806361231 37.0 37.0 37.0 35.0 37.0 6 35.84968401390547 37.0 37.0 37.0 35.0 37.0 7 35.81775229595807 37.0 37.0 37.0 35.0 37.0 8 35.851590307684326 37.0 37.0 37.0 35.0 37.0 9 37.5975188086961 39.0 39.0 39.0 35.0 39.0 10-11 37.672297514657814 39.0 39.0 39.0 36.0 39.0 12-13 37.67724744461164 39.0 39.0 39.0 37.0 39.0 14-15 39.19428267524516 41.0 40.0 41.0 37.0 41.0 16-17 39.04142012141338 41.0 40.0 41.0 36.5 41.0 18-19 39.12364810875318 41.0 40.0 41.0 36.5 41.0 20-21 39.18965651429461 41.0 40.0 41.0 37.0 41.0 22-23 39.15274529134022 41.0 40.0 41.0 37.0 41.0 24-25 39.107808332900944 41.0 40.0 41.0 36.0 41.0 26-27 38.958246251232296 41.0 40.0 41.0 36.0 41.0 28-29 38.89934934882997 41.0 40.0 41.0 35.5 41.0 30-31 38.83692678877186 41.0 39.0 41.0 35.0 41.0 32-33 38.6610589944482 41.0 39.0 41.0 35.0 41.0 34-35 38.67403102786281 41.0 39.0 41.0 35.0 41.0 36-37 38.66614694131687 41.0 39.0 41.0 35.0 41.0 38-39 38.5518383230426 41.0 39.0 41.0 35.0 41.0 40-41 38.47615576194677 41.0 39.0 41.0 35.0 41.0 42-43 38.34909977688994 40.5 38.5 41.0 34.5 41.0 44-45 38.19696310901261 40.0 38.0 41.0 34.0 41.0 46-47 38.059769107040935 40.0 38.0 41.0 34.0 41.0 48-49 37.88537332018886 40.0 38.0 41.0 33.0 41.0 50-51 36.64658849167229 39.0 36.0 40.0 31.5 40.5 52-53 36.93848907798474 39.5 36.5 40.5 32.5 40.5 54-55 37.39441654127536 40.0 36.0 41.0 33.0 41.0 56-57 37.27530898147668 40.0 35.5 41.0 33.0 41.0 58-59 37.15677839464536 40.0 35.0 41.0 33.0 41.0 60-61 36.95258963316557 39.5 35.0 41.0 32.5 41.0 62-63 36.720378768224975 39.0 35.0 41.0 32.0 41.0 64-65 36.515000259430295 39.0 35.0 41.0 32.0 41.0 66-67 36.32997353811031 38.5 35.0 41.0 31.0 41.0 68-69 36.085341150832775 37.5 35.0 41.0 31.0 41.0 70-71 35.838087479894156 37.0 35.0 40.0 31.0 41.0 72-73 35.54780210657397 36.5 35.0 40.0 30.5 41.0 74-75 35.26063508535257 36.0 35.0 39.0 30.0 41.0 76-77 34.91650495511856 36.0 35.0 39.0 30.0 41.0 78-79 34.63099361801484 35.0 35.0 38.5 30.0 39.5 80-81 34.27298241062627 35.0 34.5 37.0 29.5 39.0 82-83 33.95052145488507 35.0 34.0 37.0 29.0 39.0 84-85 33.65425413791314 35.0 34.0 36.5 29.0 38.0 86-87 33.3736154205365 35.0 34.0 36.0 29.0 37.0 88-89 33.17516629481658 35.0 34.0 36.0 29.0 37.0 90-91 32.95554558190214 35.0 34.0 35.0 27.5 36.0 92-93 32.77560992061433 35.0 34.0 35.0 27.0 36.0 94-95 32.61504799460385 35.0 34.0 35.0 27.0 36.0 96-97 32.46582421003477 35.0 34.0 35.0 26.5 36.0 98-99 32.39017641259794 35.0 33.0 35.0 26.0 35.5 100-101 31.21331655684118 34.5 31.0 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 8.0 7 846.0 8 3995.0 9 2635.0 10 1676.0 11 1734.0 12 1813.0 13 1841.0 14 1709.0 15 1635.0 16 1704.0 17 1789.0 18 2002.0 19 2284.0 20 2680.0 21 3464.0 22 3999.0 23 4034.0 24 3888.0 25 4342.0 26 4349.0 27 4602.0 28 5140.0 29 5673.0 30 7161.0 31 9052.0 32 12168.0 33 17515.0 34 29212.0 35 54330.0 36 117034.0 37 202200.0 38 305839.0 39 141237.0 40 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.10439968156507 20.81290285032519 14.007083722196704 24.07561374591304 2 15.128106677735692 21.159030768432523 39.775437140040474 23.937425413791313 3 19.085767654231308 27.649250246458777 29.41088569501375 23.854096404296165 4 12.293467545270586 18.253515280444145 40.676386654905826 28.77663051937944 5 12.904996627406215 39.38369740050848 35.33741503657967 12.37389093550563 6 27.18362476002698 39.18902091008146 20.68769781559695 12.93965651429461 7 25.021013853577546 31.925491620401598 24.582265345301717 18.47122918071914 8 23.740569708919214 36.14299797644373 22.394852903024955 17.7215794116121 9 25.90058631245784 16.120686971410784 21.349763918435116 36.62896279769626 10-11 24.824832667462253 26.037409847973848 29.26358117573808 19.87417630882582 12-13 25.12976703159861 23.85954444040886 29.214081876199867 21.796606651792665 14-15 22.16332818443038 26.04296427325726 26.212275981198204 25.581431561114155 16-17 22.11664574175439 28.489969022822176 27.51304042609975 21.880344809323685 18-19 22.04634791661693 28.215327031406183 27.95100523246098 21.787319819515908 20-21 23.148740739356587 26.70901141771867 27.525801075176727 22.61644676774802 22-23 23.211653592528194 27.369712476253422 26.90711174637227 22.511522184846115 24-25 22.541212027487486 27.311459450146497 27.35878724598933 22.788541276376684 26-27 22.428111866341514 28.300627821304413 27.49104965495771 21.780210657396356 28-29 22.369843822964768 28.13241322056763 27.524516162507133 21.973226793960464 30-31 22.275255538836713 27.42546567737249 27.742178176723915 22.557100607066882 32-33 22.33767446687075 27.594458568982517 28.022155346858302 22.045711617288436 34-35 22.871789550147874 27.049758729829293 27.59938774451305 22.47906397550978 36-37 21.87313332527198 27.253671591876856 28.381603714588643 22.49159136826252 38-39 22.253678254259405 27.633905059399495 27.323247916023462 22.789168770317637 40-41 22.684099129881606 27.093273225685433 27.9390559093487 22.28357173508426 42-43 22.502835652532163 27.498461535268458 27.897735940300304 22.10096687189907 44-45 22.550411004255597 26.937500681072006 27.79422440557332 22.71786390909907 46-47 22.45068230166554 26.828776007886677 27.862501945727182 22.858039744720593 48-49 21.86509624863799 27.404607481969595 27.985212473408396 22.74508379598402 50-51 22.03279198879261 27.675400819799723 27.589736937684844 22.702070253722827 52-53 22.27556685518601 27.334665075494215 27.18616717687957 23.2036008924402 54-55 22.29331188709594 26.745913972915474 27.714834224044 23.245939915944586 56-57 22.330773621128003 27.150365796710425 27.546827167540084 22.97203341462149 58-59 22.518589400629672 27.35512877528685 27.716771689623304 22.409510134460177 60-61 22.31458311494347 27.53071902072775 27.507989176857905 22.646708687470873 62-63 21.96585792195444 27.067551324183658 28.062375828587914 22.90421492527398 64-65 22.80018189066627 26.51072033687148 27.45422625870002 23.23487151376223 66-67 22.045549960741738 27.071593262628678 27.17346235021274 23.70939442641684 68-69 22.238520209619676 27.134333004721633 28.183572873968764 22.443573911689928 70-71 22.66974523945416 26.88834120271883 27.666787734135838 22.775125823691177 72-73 22.358843978622943 27.189384112488973 27.9062418928034 22.545530016084676 74-75 22.44238053235096 26.982099309915426 27.819488403465986 22.756031754267628 76-77 22.39615005448036 26.615628080734705 27.26425569449489 23.72396617029004 78-79 22.672267102163836 26.196358782828998 27.708766975282213 23.42260713972495 80-81 22.221258918276583 27.319686373615763 27.277531731491543 23.181522976616115 82-83 22.039621733553368 27.564218033220044 27.58254268267677 22.813617550549818 84-85 22.380816946788016 26.605473161496047 28.091680229854514 22.922029661861423 86-87 22.373648121075192 27.478185118118088 27.469307572183272 22.678859188623452 88-89 22.670108860951338 26.742818467849844 27.046034677304664 23.541037993894154 90-91 22.433092927930264 26.614746017745034 27.378145592279356 23.57401546204535 92-93 22.386376844080264 26.828877238424948 27.751955119424178 23.032790798070618 94-95 22.736003735796192 26.454469983915324 27.703159860945366 23.10636641934312 96-97 23.124370881544127 26.98407098012764 27.43791833134437 22.453639806983862 98-99 22.15460864259282 27.092677186435683 27.560743260491922 23.191970910479576 100-101 22.933473000771873 26.509163599329554 27.170005829281475 23.387357570617098 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 1.0 3 2.0 4 2.0 5 3.5 6 6.0 7 9.5 8 16.0 9 19.5 10 16.0 11 20.5 12 27.5 13 23.5 14 25.0 15 36.5 16 36.5 17 38.5 18 55.5 19 67.5 20 85.5 21 95.5 22 99.5 23 122.0 24 169.5 25 220.5 26 293.0 27 456.5 28 722.5 29 1469.0 30 3159.5 31 6176.5 32 10552.5 33 16500.0 34 23952.0 35 32266.0 36 40050.0 37 45853.0 38 50202.5 39 52298.5 40 50970.0 41 47181.0 42 41923.0 43 36690.5 44 31759.0 45 28744.5 46 28196.5 47 25861.5 48 24413.5 49 26637.0 50 29455.0 51 29485.0 52 28737.0 53 29590.5 54 31653.0 55 32492.0 56 26945.0 57 22136.0 58 21370.0 59 20768.0 60 17443.0 61 12858.0 62 10611.5 63 7554.0 64 4219.0 65 2526.5 66 2045.5 67 1889.0 68 1472.5 69 948.5 70 518.5 71 307.5 72 266.5 73 207.5 74 157.0 75 121.5 76 87.5 77 62.5 78 39.0 79 28.5 80 23.5 81 16.0 82 13.0 83 10.5 84 7.0 85 6.5 86 8.0 87 7.0 88 4.5 89 2.0 90 3.0 91 6.5 92 4.0 93 0.5 94 3.0 95 4.0 96 2.5 97 1.5 98 1.5 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14984693612826233 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03507497535412235 16-17 0.07087635552327089 18-19 0.025009080060187826 20-21 0.03803248067244332 22-23 0.06397550978052198 24-25 0.016292222279873397 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.021325169926840658 38-39 0.004929175530534945 40-41 0.004721631297670316 42-43 0.0028018471436724954 44-45 0.009910237119286049 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.01354226119441706 60-61 0.016499766512738025 62-63 0.027395838738131065 64-65 0.045037098531624555 66-67 0.01644788045452187 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.015929019872360298 80-81 0.054947335650910596 82-83 0.048409692315674775 84-85 0.026773206039537176 86-87 0.056659575572043784 88-89 0.03227312821044986 90-91 0.0 92-93 0.0026980750272401805 94-95 0.0 96-97 0.0 98-99 4.150884657292586E-4 100-101 0.04249468167903284 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 963650.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.09332552426283 #Duplication Level Percentage of deduplicated Percentage of total 1 68.30094136292605 27.384118756773816 2 15.161458996112684 12.157466219078179 3 6.226961639662938 7.489788001383109 4 3.122880345775764 5.0082663310604065 5 1.8312167822798517 3.670978527871961 6 1.1632452085516662 2.798302128660058 7 0.7600018152388197 2.132970012418046 8 0.5651694825410868 1.8127619231919176 9 0.4169113319695914 1.5043825572669751 >10 2.1379152811415265 15.38406669818123 >50 0.16110320618185006 4.556059065638017 >100 0.13700128813682716 11.07431606293078 >500 0.01126396823625406 2.912884146482535 >1k 0.0039292912452049055 2.1136395690629537 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2647 0.27468479219633685 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1957 0.20308203185803975 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1827 0.18959165672183884 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1403 0.14559227935453742 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1278 0.13262076480049811 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1235 0.12815856379390858 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1228 0.12743215897888238 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1147 0.1190266175478649 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1130 0.11726249156851555 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1124 0.11663985886992165 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1058 0.10979089918538888 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1046 0.1085456337882011 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1024 0.1062626472266902 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1019 0.10574378664452862 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1002 0.10397966066517927 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.0377211643231463E-4 0.0 3 0.0 0.0 0.0 2.0754423286462926E-4 0.0 4 0.0 0.0 0.0 2.0754423286462926E-4 0.0 5 0.0 0.0 0.0 2.0754423286462926E-4 0.0 6 0.0 0.0 0.0 2.0754423286462926E-4 0.0 7 0.0 0.0 0.0 2.0754423286462926E-4 0.0 8 0.0 0.0 0.0 2.0754423286462926E-4 0.0 9 0.0 0.0 0.0 3.113163492969439E-4 0.0 10-11 0.0 0.0 0.0 3.113163492969439E-4 0.0 12-13 0.0 0.0 0.0 3.113163492969439E-4 0.0 14-15 0.0 0.0 0.0 5.188605821615732E-4 0.0 16-17 0.0 0.0 0.0 7.264048150262025E-4 0.0 18-19 0.0 0.0 0.0 8.30176931458517E-4 0.0 20-21 0.0 0.0 0.0 0.001141493280755461 0.0 22-23 0.0 0.0 0.0 0.0020754423286462927 0.0 24-25 0.0 0.0 0.0 0.0037357961915633273 0.0 26-27 0.0 0.0 0.0 0.005188605821615733 0.0 28-29 0.0 0.0 0.0 0.009598920769989104 0.0 30-31 0.0 0.0 0.0 0.02397135889586468 0.0 32-33 0.0 0.0 0.0 0.05889067607533856 0.0 34-35 0.0 0.0 0.0 0.1038240024905308 0.0 36-37 0.0 0.0 0.0 0.17584185129455715 0.0 38-39 0.0 0.0 0.0 0.30213251699268406 0.0 40-41 0.0 0.0 0.0 0.45675297047683283 0.0 42-43 0.0 0.0 0.0 0.6030716546463966 0.0 44-45 0.0 0.0 0.0 0.7599750946920563 0.0 46-47 0.0 0.0 0.0 0.9348829969387226 0.0 48-49 0.0 0.0 0.0 1.1248378560680745 0.0 50-51 0.0 0.0 0.0 1.3276604576350335 0.0 52-53 0.0 0.0 0.0 1.5328179318217194 0.0 54-55 0.0 0.0 0.0 1.7184662481191304 0.0 56-57 0.0 0.0 0.0 1.935661287811965 0.0 58-59 0.0 0.0 0.0 2.1714834224043997 0.0 60-61 0.0 0.0 0.0 2.4291495875058375 0.0 62-63 0.0 0.0 0.0 2.6904477766824053 0.0 64-65 0.0 0.0 0.0 2.945208322523738 0.0 66-67 0.0 0.0 0.0 3.2194261401961293 0.0 68-69 0.0 0.0 0.0 3.532869817879936 0.0 70-71 0.0 0.0 0.0 3.8751621439319255 0.0 72-73 0.0 0.0 0.0 4.236548539407462 0.0 74-75 0.0 0.0 0.0 4.585222850620038 0.0 76-77 0.0 0.0 0.0 4.942406475380066 0.0 78-79 0.0 0.0 0.0 5.351009183832304 0.0 80-81 0.0 0.0 0.0 5.802002801847143 0.0 82-83 0.0 0.0 0.0 6.28018471436725 0.0 84-85 0.0 0.0 0.0 6.740102734395268 0.0 86-87 0.0 0.0 0.0 7.206817828049603 0.0 88-89 0.0 0.0 0.0 7.729258548228091 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1275 0.0 39.551003 1 GGTATCA 710 0.0 38.19252 1 CCGTGCG 100 3.0249794E-8 38.00714 9 ATAACCG 100 3.0388037E-8 37.987423 5 TAACCGT 120 3.805326E-9 35.61321 6 ATCAACG 1455 0.0 33.6143 3 AACCGTG 250 0.0 32.28931 7 TCAACGC 1515 0.0 32.28304 4 TCGCACC 1080 0.0 31.274935 1 CGCAGAG 1675 0.0 29.484304 8 CTGTGCG 1240 0.0 29.118376 9 CGCACCA 1180 0.0 28.571049 2 ACGCAGA 1790 0.0 27.58863 7 GTACATG 3235 0.0 26.911543 1 ACATGGG 3100 0.0 26.039764 3 TACATGG 3300 0.0 25.468842 2 GCACCAC 1410 0.0 25.257595 3 CGTTATA 95 0.001215459 25.038494 1 AAACCGT 190 1.1947122E-8 24.991724 6 ACACGCT 575 0.0 24.774406 6 >>END_MODULE