##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224507_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1373889 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31504946906191 34.0 31.0 34.0 31.0 34.0 2 32.46915944446749 34.0 31.0 34.0 31.0 34.0 3 32.61129101404844 34.0 31.0 34.0 31.0 34.0 4 35.87400728879844 37.0 37.0 37.0 35.0 37.0 5 35.87777032933519 37.0 37.0 37.0 35.0 37.0 6 35.97903469639833 37.0 37.0 37.0 35.0 37.0 7 35.944379786139926 37.0 37.0 37.0 35.0 37.0 8 35.98113894208338 37.0 37.0 37.0 35.0 37.0 9 37.722885909997096 39.0 39.0 39.0 35.0 39.0 10-11 37.8042279980406 39.0 39.0 39.0 36.0 39.0 12-13 37.806629574878315 39.0 39.0 39.0 37.0 39.0 14-15 39.333480361222776 41.0 40.0 41.0 37.0 41.0 16-17 39.1729935970082 41.0 40.0 41.0 36.5 41.0 18-19 39.25247745633017 41.0 40.0 41.0 36.5 41.0 20-21 39.310611337597145 41.0 40.0 41.0 37.0 41.0 22-23 39.27055133274959 41.0 40.0 41.0 37.0 41.0 24-25 39.21692545758791 41.0 40.0 41.0 36.0 41.0 26-27 39.0627587090369 41.0 40.0 41.0 36.0 41.0 28-29 38.992983785444096 41.0 39.0 41.0 35.5 41.0 30-31 38.93226235889507 41.0 39.0 41.0 35.0 41.0 32-33 38.75743127719925 41.0 39.0 41.0 35.0 41.0 34-35 38.760559987014965 41.0 39.0 41.0 35.0 41.0 36-37 38.76710090844311 41.0 39.0 41.0 35.0 41.0 38-39 38.65886545419608 41.0 39.0 41.0 35.0 41.0 40-41 38.56950525115202 41.0 39.0 41.0 35.0 41.0 42-43 38.43093110142085 40.0 38.0 41.0 34.5 41.0 44-45 38.27258606772454 40.0 38.0 41.0 34.0 41.0 46-47 38.11691992584554 40.0 38.0 41.0 34.0 41.0 48-49 37.91906478616541 40.0 37.5 41.0 33.0 41.0 50-51 36.63072380665396 38.5 35.5 40.0 31.5 40.5 52-53 36.94908395074129 39.0 36.0 40.0 32.5 40.5 54-55 37.40077327935517 40.0 36.0 41.0 33.0 41.0 56-57 37.25071166593517 39.5 35.0 41.0 33.0 41.0 58-59 37.1042365867985 39.0 35.0 41.0 33.0 41.0 60-61 36.86186657000675 39.0 35.0 41.0 32.5 41.0 62-63 36.58495154994327 38.5 35.0 41.0 32.0 41.0 64-65 36.34734065124621 37.5 35.0 41.0 32.0 41.0 66-67 36.11500710756109 37.0 35.0 40.5 31.0 41.0 68-69 35.820723144300594 36.5 35.0 40.0 31.0 41.0 70-71 35.533878646673784 36.0 35.0 39.5 31.0 41.0 72-73 35.20991506591872 35.5 35.0 39.0 30.5 41.0 74-75 34.92345269523229 35.0 35.0 39.0 30.0 40.5 76-77 34.58305838390147 35.0 34.5 37.5 30.0 39.5 78-79 34.322977329318455 35.0 34.0 37.0 30.0 39.0 80-81 34.00898835349872 35.0 34.0 36.5 30.0 39.0 82-83 33.74373912302959 35.0 34.0 36.0 29.0 37.5 84-85 33.510513585886486 35.0 34.0 36.0 29.0 37.0 86-87 33.28509508410068 35.0 34.0 35.5 29.0 37.0 88-89 33.13737754651213 35.0 34.0 35.0 29.0 36.0 90-91 32.96648273623269 35.0 34.0 35.0 29.0 36.0 92-93 32.82729208837104 35.0 34.0 35.0 28.5 36.0 94-95 32.70041757376324 35.0 33.5 35.0 27.0 36.0 96-97 32.572346819866816 35.0 33.0 35.0 27.0 35.0 98-99 32.52447140926232 35.0 33.0 35.0 27.0 35.0 100-101 31.309339036850865 34.5 31.0 35.0 23.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 6.0 7 561.0 8 2243.0 9 1442.0 10 1045.0 11 1475.0 12 2027.0 13 2298.0 14 2258.0 15 2354.0 16 2412.0 17 2712.0 18 2834.0 19 3158.0 20 3587.0 21 4554.0 22 5543.0 23 5735.0 24 5935.0 25 6380.0 26 6675.0 27 7287.0 28 8173.0 29 9519.0 30 11774.0 31 15026.0 32 19923.0 33 28434.0 34 47314.0 35 86003.0 36 188324.0 37 332164.0 38 420511.0 39 134187.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.24593614747801 18.420174143241784 13.192451168899701 25.141438540380502 2 16.28611648111054 19.471674546979084 37.80373654912191 26.438472422788468 3 20.073878090233173 25.296731531387273 27.877806366617293 26.751584011762265 4 13.506331297506566 16.298842191763672 37.25548424945538 32.93934226127438 5 14.281284732609404 37.89192576692877 33.718517289242435 14.108272211219392 6 30.90693644100797 36.13952801136045 18.5806859214973 14.372849626134279 7 27.991271492820747 30.518331539156367 22.04603137516932 19.444365592853572 8 26.214272040899957 34.530082124538445 20.292469042258872 18.963176792302725 9 26.69356840326984 15.719974466641773 19.91951314844212 37.66694398164626 10-11 26.34630599706381 25.094785677736702 27.031659762906614 21.52724856229288 12-13 26.42789919709671 22.589597849607937 27.433584518108812 23.54891843518654 14-15 23.613813300402224 24.46165350684301 24.606042645401246 27.31849054735352 16-17 23.674577313182134 27.333085916970806 25.68757286369386 23.3047639061532 18-19 23.72386835050811 26.89767066659095 26.171656015248345 23.206804967652598 20-21 24.605646304620254 25.495058336603986 26.009431138923617 23.88986421985214 22-23 24.603038470516815 25.982247850539036 25.486348660431236 23.928365018512913 24-25 23.97665182411264 25.97535526944641 25.85032255528284 24.19767035115811 26-27 23.778230992460088 26.880956176226757 26.14250496219127 23.198307869121887 28-29 23.612715437710033 26.70011915081932 26.275739888739192 23.41142552273146 30-31 23.620394369559694 26.186067433395277 26.266277697834393 23.927260499210632 32-33 23.471182897599444 26.312642433267897 26.485291024238496 23.730883644894167 34-35 24.055691544222277 25.87621707430513 26.08642328455938 23.981668096913214 36-37 23.47215240236332 25.97416448834774 26.682790048883405 23.870893060405532 38-39 23.58232161145658 26.395877750465313 25.95109378059459 24.070706857483515 40-41 23.85447883145158 26.07371341098131 26.597768099885936 23.47403965768117 42-43 23.830544079240436 26.31183016412344 26.506539315963096 23.35108644067303 44-45 23.829925233141424 25.94856220659413 26.223578457885317 23.99793410237913 46-47 23.83027304243647 25.626378841376557 26.39816608183048 24.145182034356488 48-49 23.35345140691861 26.107604034969345 26.491950950913797 24.046993607198253 50-51 23.40498395430781 26.447842584080668 26.237490801658648 23.90968265995288 52-53 23.631348675184093 26.238910130294368 25.96268694195819 24.167054252563343 54-55 23.71003043186167 25.73188226996504 26.30412646145358 24.253960836719706 56-57 23.62243237990842 26.015493245815346 26.25998170157851 24.102092672697722 58-59 23.769225309433985 26.116027961439276 26.36179161411612 23.752955115010618 60-61 23.555563806131367 26.35247260657166 26.257469652744188 23.834493934552793 62-63 23.25806169774367 26.045745447661762 26.641608480709444 24.054584373885124 64-65 23.925272846303805 25.494152747323966 26.130108381171404 24.450466025200825 66-67 23.32646111152364 26.140250108106457 25.848581075473593 24.684707704896315 68-69 23.47205633060604 25.978044805657518 26.863523909136767 23.686374954599682 70-71 23.743330065238165 25.779775513160086 26.528162027645614 23.948732393956135 72-73 23.60638304841221 25.96876457996243 26.692476612011596 23.73237575961377 74-75 23.59113436383871 25.844482341732117 26.58915676593961 23.975226528489564 76-77 23.594045807194032 25.50544476300487 26.315044374036038 24.585465055765056 78-79 23.784912561169328 24.917664376411388 26.686897497608552 24.610525564810732 80-81 23.478338765832753 25.97203261174738 26.127451498055258 24.422177124364605 82-83 23.373290508116753 26.24196344466506 26.425005926032195 23.959740121185995 84-85 23.530769412788295 25.35227059682231 26.824622810993226 24.29233717939617 86-87 23.412939156932307 26.17222008991615 26.413397258817366 24.001443494334175 88-89 23.72578879481232 25.509853768926 26.059326121834836 24.705031314426844 90-91 23.39362932522205 25.45624137029993 26.341938832030827 24.80819047244719 92-93 23.412113362009514 25.712734282905696 26.65625308213108 24.218899272953713 94-95 23.586002944924953 25.306738754004144 26.674170911915006 24.43308738915589 96-97 23.966928914926896 25.58594617177953 26.623548190574347 23.82357672271923 98-99 23.090089050750084 25.77653280364108 26.63839878242597 24.49497936318287 100-101 23.730727247174034 25.337066092261622 26.235884731588712 24.69632192897563 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.5 2 1.0 3 0.5 4 1.0 5 1.5 6 4.0 7 7.5 8 10.5 9 13.5 10 14.0 11 15.5 12 18.5 13 22.5 14 30.5 15 35.0 16 37.0 17 38.5 18 39.0 19 48.5 20 68.5 21 83.5 22 98.0 23 109.0 24 136.0 25 183.5 26 235.5 27 298.0 28 361.5 29 442.5 30 586.0 31 1035.0 32 2161.0 33 4337.5 34 8769.0 35 16507.0 36 29145.0 37 43774.5 38 56191.5 39 64559.5 40 65922.5 41 62922.5 42 59552.5 43 57093.5 44 54606.5 45 51351.0 46 48402.0 47 44318.5 48 42443.5 49 44959.0 50 48207.0 51 48795.5 52 48466.0 53 50646.5 54 54563.5 55 55628.0 56 48509.5 57 41791.5 58 39691.5 59 38312.5 60 33503.5 61 26329.5 62 21547.5 63 15818.0 64 10278.0 65 7067.0 66 5534.0 67 4908.5 68 3757.0 69 2455.0 70 1698.5 71 1189.5 72 950.5 73 810.0 74 643.0 75 480.5 76 351.0 77 241.0 78 178.0 79 132.5 80 85.0 81 59.0 82 45.0 83 39.5 84 32.5 85 25.5 86 21.5 87 17.5 88 14.0 89 12.0 90 11.0 91 8.5 92 6.5 93 5.0 94 5.0 95 4.5 96 5.0 97 5.5 98 4.5 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13938535063604118 2 7.278608388305024E-5 3 2.9114433553220094E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03763040536753697 16-17 0.07529720377701546 18-19 0.026421348449547234 20-21 0.04119692347780643 22-23 0.06758187888541213 24-25 0.01808734184493798 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.022891223381219298 38-39 0.0055317423751118176 40-41 0.005968458878410119 42-43 0.0032753737747372603 44-45 0.011063484750223635 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.015394256741265124 60-61 0.018014555761054932 62-63 0.030497369146998046 64-65 0.04949453704047416 66-67 0.017687018383581207 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017687018383581207 80-81 0.060084912245457964 82-83 0.05171451259890719 84-85 0.02958754309845992 86-87 0.060558021790697796 88-89 0.034973713305805634 90-91 0.0 92-93 0.003093408565029635 94-95 0.0 96-97 0.0 98-99 6.914677968889772E-4 100-101 0.04672866585291825 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1373889.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.82943993324201 #Duplication Level Percentage of deduplicated Percentage of total 1 66.87695416460825 26.636716288174426 2 15.826545221956104 12.60724864537278 3 6.542005499014205 7.816932451977755 4 3.3671204731937308 5.364420905402363 5 1.9431252776469419 3.8696795764401535 6 1.224308963010442 2.9258124181172525 7 0.8344788876625464 2.3265778712199796 8 0.6133877499994811 1.9544712435512634 9 0.42090513154446063 1.5087974088999079 >10 2.057603723873296 14.346870664114089 >50 0.14192960496437035 3.9781106790647045 >100 0.13536225598238633 11.07019614420588 >500 0.012944468841544272 3.4916673930443767 >1k 0.0033285777021113843 2.1024983104150183 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3718 0.27061865987718076 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2497 0.1817468514559764 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2324 0.16915485894420873 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1701 0.12380912868506845 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1620 0.11791345589054138 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1520 0.11063484750223634 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1475 0.10735947372749909 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1461 0.10634046855313639 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1447 0.1053214633787737 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1439 0.10473917470770928 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.4557216776610047E-4 0.0 8 0.0 0.0 0.0 1.4557216776610047E-4 0.0 9 0.0 0.0 0.0 2.183582516491507E-4 0.0 10-11 0.0 0.0 0.0 2.183582516491507E-4 0.0 12-13 0.0 3.639304194152512E-5 0.0 2.9114433553220094E-4 0.0 14-15 0.0 7.278608388305024E-5 0.0 3.6393041941525117E-4 0.0 16-17 0.0 7.278608388305024E-5 0.0 3.6393041941525117E-4 0.0 18-19 0.0 7.278608388305024E-5 0.0 5.095025871813516E-4 0.0 20-21 0.0 7.278608388305024E-5 0.0 6.914677968889772E-4 0.0 22-23 0.0 7.278608388305024E-5 0.0 0.0010553982163042284 0.0 24-25 0.0 7.278608388305024E-5 0.0 0.001965224264842356 0.0 26-27 0.0 7.278608388305024E-5 0.0 0.0032753737747372603 0.0 28-29 0.0 7.278608388305024E-5 0.0 0.005495349333170293 0.0 30-31 0.0 7.278608388305024E-5 0.0 0.011900524714878714 0.0 32-33 0.0 7.278608388305024E-5 0.0 0.030133438727582798 0.0 34-35 0.0 7.278608388305024E-5 0.0 0.05557217504470885 0.0 36-37 0.0 7.278608388305024E-5 0.0 0.0972422080677551 0.0 38-39 0.0 1.0917912582457536E-4 0.0 0.17727050729716884 0.0 40-41 0.0 1.4557216776610047E-4 0.0 0.27276584935173076 0.0 42-43 0.0 1.4557216776610047E-4 0.0 0.36221994644399946 0.0 44-45 0.0 1.4557216776610047E-4 0.0 0.46648601160646896 0.0 46-47 0.0 1.4557216776610047E-4 0.0 0.5860007613424374 0.0 48-49 0.0 1.4557216776610047E-4 0.0 0.7106833230341025 0.0 50-51 0.0 1.4557216776610047E-4 0.0 0.8372219298647854 0.0 52-53 0.0 1.8196520970762558E-4 0.0 0.9714394685451299 0.0 54-55 0.0 2.183582516491507E-4 0.0 1.1062029028545974 0.0 56-57 0.0 2.183582516491507E-4 0.0 1.2589444998831785 0.0 58-59 0.0 2.183582516491507E-4 0.0 1.426570851065843 0.0 60-61 0.0 2.183582516491507E-4 0.0 1.6159602413295397 0.0 62-63 0.0 2.183582516491507E-4 0.0 1.8084066471163245 0.0 64-65 0.0 2.183582516491507E-4 0.0 1.9988150425543838 0.0 66-67 0.0 2.183582516491507E-4 0.0 2.2109864770734755 0.0 68-69 0.0 2.183582516491507E-4 0.0 2.4600240630793317 0.0 70-71 0.0 2.183582516491507E-4 0.0 2.730679115998454 0.0 72-73 0.0 2.183582516491507E-4 0.0 3.01192454412256 3.639304194152512E-5 74-75 0.0 2.183582516491507E-4 0.0 3.2962997738536375 7.278608388305024E-5 76-77 0.0 2.183582516491507E-4 0.0 3.586934606798657 7.278608388305024E-5 78-79 0.0 2.183582516491507E-4 0.0 3.9167647459146995 7.278608388305024E-5 80-81 0.0 2.183582516491507E-4 0.0 4.288483276305437 7.278608388305024E-5 82-83 0.0 2.183582516491507E-4 0.0 4.687169050774845 7.278608388305024E-5 84-85 0.0 2.183582516491507E-4 0.0 5.089348557270638 7.278608388305024E-5 86-87 0.0 2.183582516491507E-4 0.0 5.50459316582344 7.278608388305024E-5 88-89 0.0 2.183582516491507E-4 0.0 5.958559971002025 7.278608388305024E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1010 0.0 43.333324 1 GTATCAA 1810 0.0 43.104324 1 AAACCGT 200 0.0 35.610523 6 ATCAACG 2445 0.0 30.682821 3 TCAACGC 2515 0.0 29.828825 4 CCGTGCG 210 1.8189894E-12 29.409935 9 TCGCACC 1270 0.0 28.843143 1 GTACATG 5515 0.0 28.5521 1 TAGACCG 100 4.9675495E-5 28.488417 5 AACCGTG 315 0.0 27.131826 7 CGCACCA 1370 0.0 27.032803 2 ACATGGG 5845 0.0 26.400726 3 ACCGTGC 295 0.0 25.75318 8 CGCAGAG 3025 0.0 25.428602 8 TACATGG 6140 0.0 25.28695 2 TACCCCG 95 0.0012295872 24.98984 5 ACGCAGA 3130 0.0 24.726368 7 TATCAAC 3095 0.0 24.392344 2 CTGTGCG 1665 0.0 23.96818 9 CATGGGG 4095 0.0 23.88528 4 >>END_MODULE