##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224502_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 340224 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.117131654439426 34.0 33.0 34.0 31.0 34.0 2 33.24340434537246 34.0 33.0 34.0 31.0 34.0 3 33.3592280379985 34.0 34.0 34.0 31.0 34.0 4 36.588571059066965 37.0 37.0 37.0 35.0 37.0 5 36.61816332768999 37.0 37.0 37.0 35.0 37.0 6 36.660347300601956 37.0 37.0 37.0 35.0 37.0 7 36.64309102238525 37.0 37.0 37.0 35.0 37.0 8 36.63000846501129 37.0 37.0 37.0 35.0 37.0 9 38.4483693096313 39.0 39.0 39.0 37.0 39.0 10-11 38.480689193002256 39.0 39.0 39.0 37.0 39.0 12-13 38.46680422310007 39.0 39.0 39.0 37.0 39.0 14-15 40.024035635346124 41.0 40.0 41.0 38.0 41.0 16-17 40.02412675178706 41.0 40.0 41.0 38.0 41.0 18-19 40.02703659941686 41.0 40.0 41.0 38.0 41.0 20-21 40.02664861973288 41.0 40.0 41.0 38.0 41.0 22-23 39.94869409565463 41.0 40.0 41.0 38.0 41.0 24-25 39.89929134922875 41.0 40.0 41.0 38.0 41.0 26-27 39.818475474981184 41.0 40.0 41.0 38.0 41.0 28-29 39.77587706922498 41.0 40.0 41.0 37.0 41.0 30-31 39.69131072469902 41.0 40.0 41.0 37.0 41.0 32-33 39.612124659048156 41.0 40.0 41.0 36.0 41.0 34-35 39.515297274736646 41.0 40.0 41.0 36.0 41.0 36-37 39.371277452501886 41.0 39.0 41.0 35.5 41.0 38-39 39.233406520410085 41.0 39.0 41.0 35.0 41.0 40-41 39.05863636898044 41.0 39.0 41.0 35.0 41.0 42-43 38.90832510346125 41.0 38.5 41.0 35.0 41.0 44-45 38.58929264249436 40.0 38.0 41.0 35.0 41.0 46-47 38.280012579947325 40.0 37.5 41.0 35.0 41.0 48-49 38.100536705229494 40.0 37.0 41.0 34.5 41.0 50-51 37.87023549191122 40.0 36.5 41.0 34.0 41.0 52-53 37.56553329571106 39.5 36.0 41.0 34.0 41.0 54-55 37.331511004514674 39.0 35.0 41.0 33.0 41.0 56-57 37.06113619262604 39.0 35.0 41.0 33.0 41.0 58-59 36.74558820071482 38.0 35.0 41.0 33.0 41.0 60-61 36.458386239653876 37.0 35.0 40.5 33.0 41.0 62-63 36.219523020127916 37.0 35.0 40.0 32.5 41.0 64-65 35.93270462989089 36.0 35.0 40.0 32.0 41.0 66-67 35.646981106565086 36.0 35.0 39.0 32.0 41.0 68-69 35.374550296275395 35.0 35.0 39.0 31.0 41.0 70-71 35.08291302200902 35.0 35.0 39.0 31.0 41.0 72-73 34.79787581123025 35.0 35.0 37.5 31.0 40.0 74-75 34.50520686371332 35.0 35.0 37.0 31.0 39.5 76-77 32.737774231094804 34.5 32.0 35.5 27.5 38.0 78-79 34.08055428188487 35.0 34.0 36.0 31.0 39.0 80-81 34.06200620767494 35.0 35.0 36.0 31.0 37.5 82-83 33.90586789879609 35.0 35.0 35.5 31.0 37.0 84-85 33.73914244732882 35.0 34.0 35.0 31.0 37.0 86-87 33.57465228790444 35.0 34.0 35.0 31.0 36.0 88-89 33.45476656555681 35.0 34.0 35.0 30.5 36.0 90-91 33.332388367663654 35.0 34.0 35.0 30.0 36.0 92-93 33.246325949962376 35.0 34.0 35.0 30.0 36.0 94-95 33.152168865218215 35.0 34.0 35.0 30.0 35.0 96-97 33.111719043924005 35.0 34.0 35.0 30.0 35.0 98-99 33.08929558173439 35.0 34.0 35.0 30.0 35.0 100-101 32.21866182279909 34.5 32.5 35.0 26.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 5.0 15 24.0 16 67.0 17 141.0 18 295.0 19 489.0 20 720.0 21 1226.0 22 1849.0 23 1831.0 24 1333.0 25 1277.0 26 1522.0 27 1947.0 28 2439.0 29 2752.0 30 3079.0 31 3355.0 32 4103.0 33 5504.0 34 9532.0 35 19678.0 36 54382.0 37 103973.0 38 93475.0 39 25222.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.102498294402395 18.282529659677902 13.265562286061943 23.349409759857764 2 16.332181151241535 18.96838553423627 38.86821623401053 25.831217080511664 3 21.009099887133186 25.511133841234013 27.361091516177577 26.118674755455228 4 13.704206640331076 16.170522949586154 37.56201796463506 32.5632524454477 5 14.301166290443943 37.627563017306244 33.440321670428894 14.63094902182092 6 30.79382994732882 35.42460261474793 18.591868886380738 15.189698551542513 7 28.292242757712565 30.829982599699022 20.666972347629798 20.210802294958615 8 27.28143811136193 33.01795287810384 19.144446012039126 20.556162998495108 9 26.985456640331073 15.799590857787809 19.67968162151994 37.53527088036117 10-11 27.469843397291193 24.312952642964635 25.955987819789318 22.261216139954854 12-13 27.92939357599699 22.161869826937547 26.582780756207676 23.325955840857787 14-15 24.787345983822423 24.243880502257337 24.234915820165536 26.733857693754704 16-17 23.813869685854026 26.96840904815651 25.451026382618508 23.766694883370956 18-19 23.73113007900677 25.803000376222723 27.083480295334837 23.38238924943567 20-21 24.973105479427897 24.221234620155315 27.129516956774776 23.676142943642017 22-23 25.096334441436596 24.945256171723674 26.206495189891278 23.751914196948455 24-25 24.58912554982886 24.549886176424337 26.521113575206595 24.339874698540207 26-27 24.239266697921458 25.8913126865551 26.512391447160542 23.3570291683629 28-29 23.91422243320581 25.7707473865061 27.062172716196535 23.252857464091555 30-31 23.875433543001588 24.656986655693373 27.169331608958906 24.29824819234613 32-33 23.820224058596775 25.104232952750177 27.53822119871202 23.537321789941025 34-35 24.672515075402735 24.84579218797995 26.531973962872552 23.94971877374477 36-37 23.698404253755694 24.79079528653771 27.19705364517352 24.313746814533076 38-39 23.93658295711061 25.066867710684726 26.468297357035365 24.528251975169297 40-41 24.209344431903688 25.07010087471783 26.895956781414597 23.82459791196388 42-43 24.236679364183598 25.234992240406324 26.949891835966895 23.57843655944319 44-45 24.45181288664112 24.691532219542342 26.724075845962325 24.13257904785421 46-47 24.30998548266819 24.735797798719474 26.12207796410233 24.83213875451001 48-49 23.91111698961709 24.621828362321715 26.688711064083066 24.77834358397813 50-51 24.64876081640331 25.032625564334086 25.997431104213693 24.321182515048907 52-53 24.649348664409327 25.645310148607976 25.271144892776526 24.43419629420617 54-55 24.648613854401805 24.794988007900677 25.913368839352895 24.643029298344622 56-57 24.768920315170792 25.21777854857413 25.423688956235583 24.589612180019486 58-59 25.168747803815883 25.29504217408628 25.59320862683175 23.94300139526609 60-61 24.77007303562398 25.51836475472497 25.479847577828217 24.231714631822832 62-63 24.64097183032355 25.00484974604966 25.916308079382993 24.43787034424379 64-65 24.959585449586154 24.727679411211437 25.577119779909708 24.7356153592927 66-67 24.28150277464259 25.0119039221219 25.568595983822423 25.137997319413092 68-69 24.79924990594432 24.83804787434161 25.98420452407825 24.37849769563582 70-71 25.143434913468777 24.78808079382995 25.78507101203913 24.283413280662153 72-73 24.415385158013546 24.911675837095558 26.01771186042137 24.655227144469528 74-75 24.73047168924003 24.703871566967646 25.876481376975168 24.689175366817157 76-77 24.7610019913439 24.201515184915753 25.681135139504295 25.356347684236052 78-79 24.493005399907698 24.047961292332836 25.815056835718757 25.64397647204071 80-81 24.107390875567503 25.08065191734777 25.907820921144104 24.904136285940627 82-83 24.16190136073917 25.06440694904319 26.128131985380026 24.645559704837613 84-85 24.494549794028213 24.71455676018065 26.2088993332187 24.581994112572435 86-87 24.057238760346124 25.65985938675696 25.761263167795335 24.52163868510158 88-89 24.633917654251317 24.52046298908954 25.196047310007526 25.64957204665162 90-91 24.39098946576373 24.902858117005266 25.2463083145222 25.459844102708807 92-93 24.511645268999246 25.12682820729872 25.939234151617757 24.42229237208427 94-95 24.541478555304742 24.8046875 25.611802812264862 25.0420311324304 96-97 24.62054411211437 25.34374412151994 25.70703418924003 24.32867757712566 98-99 22.93386122084274 25.903816309255077 26.13513449962378 25.0271879702784 100-101 23.878516217837856 25.359415993129332 25.46368192566971 25.298385863363098 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 2.0 2 3.0 3 5.5 4 4.0 5 2.0 6 8.0 7 15.0 8 25.0 9 38.5 10 44.0 11 44.5 12 48.0 13 59.5 14 61.0 15 65.0 16 76.0 17 85.5 18 100.0 19 115.5 20 124.0 21 155.0 22 190.5 23 245.0 24 327.0 25 425.0 26 582.5 27 768.0 28 915.0 29 1105.5 30 1442.5 31 1898.0 32 2565.5 33 3389.0 34 4271.0 35 5199.5 36 6298.0 37 7127.0 38 7519.0 39 7799.0 40 7737.0 41 7571.0 42 7681.5 43 8116.5 44 8809.0 45 9666.5 46 10543.0 47 11448.5 48 12343.0 49 13959.5 50 16085.5 51 16159.0 52 15136.0 53 16154.5 54 17845.0 55 17866.5 56 15390.5 57 13152.5 58 12710.5 59 12227.5 60 10114.5 61 7426.0 62 6019.5 63 4250.5 64 2510.0 65 1616.0 66 1212.0 67 1037.5 68 786.5 69 515.5 70 301.5 71 211.0 72 149.5 73 98.5 74 73.0 75 57.0 76 38.5 77 21.0 78 12.5 79 6.5 80 4.5 81 3.5 82 2.5 83 1.5 84 1.0 85 1.0 86 0.5 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4799778969149736 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0017635440180586905 22-23 8.817720090293453E-4 24-25 0.0013226580135440181 26-27 0.002792278028592927 28-29 0.005437594055680963 30-31 0.001175696012039127 32-33 1.4696200150489088E-4 34-35 0.005143670052671181 36-37 0.0020574680210684723 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.010140378103837472 46-47 0.0839153028592927 48-49 4.4088600451467263E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.008082910082769 58-59 0.04276594243792325 60-61 0.03409518434913469 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 4.4088600451467263E-4 78-79 0.009699492099322799 80-81 0.008082910082769 82-83 0.0013226580135440181 84-85 0.0022044300225733636 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06701467268623025 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 340224.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.26421282703179 #Duplication Level Percentage of deduplicated Percentage of total 1 79.88962729006909 44.15037365230625 2 12.444471883391575 13.754678853675303 3 3.59482294060215 5.959951801948005 4 1.3681695095265303 3.024432438317195 5 0.6804660294328584 1.8802709736071381 6 0.3753145593743087 1.2444878211807275 7 0.24933095792685953 0.9645355386266372 8 0.17976918386737373 0.7947841949590683 9 0.1203784751382263 0.5987359502849245 >10 0.8545095488701413 9.522383344542398 >50 0.12690182015046217 4.912137130792884 >100 0.10877298870039606 10.546214031858263 >500 0.007464812950027181 2.647014267901167 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 857 0.251892870579383 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 812 0.23866629044394283 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 747 0.21956123024830698 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 713 0.20956781414597442 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 708 0.20809819413092548 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 640 0.18811136192626035 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 589 0.17312123777276148 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 587 0.1725333897667419 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 571 0.1678306057185854 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 567 0.16665490970654626 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 567 0.16665490970654626 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 564 0.16577313769751695 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 550 0.16165820165537997 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 511 0.1501951655379985 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 487 0.14314098946576373 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 459 0.13491111738148986 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 456 0.1340293453724605 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 425 0.12491770127915727 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 418 0.12286023325808879 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 410 0.12050884123401054 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 406 0.11933314522197142 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 363 0.10669441309255079 No Hit GGATGGCACTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCT 360 0.10581264108352145 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 358 0.10522479307750188 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.939240030097818E-4 0.0 2 0.0 0.0 0.0 2.939240030097818E-4 0.0 3 0.0 0.0 0.0 2.939240030097818E-4 0.0 4 0.0 0.0 0.0 2.939240030097818E-4 0.0 5 0.0 0.0 0.0 2.939240030097818E-4 0.0 6 0.0 0.0 0.0 2.939240030097818E-4 0.0 7 0.0 0.0 0.0 2.939240030097818E-4 0.0 8 0.0 0.0 0.0 2.939240030097818E-4 0.0 9 0.0 0.0 0.0 2.939240030097818E-4 0.0 10-11 0.0 0.0 0.0 2.939240030097818E-4 0.0 12-13 0.0 0.0 0.0 2.939240030097818E-4 0.0 14-15 0.0 0.0 0.0 2.939240030097818E-4 0.0 16-17 0.0 0.0 0.0 5.878480060195636E-4 0.0 18-19 0.0 0.0 0.0 8.817720090293454E-4 0.0 20-21 0.0 0.0 0.0 0.0013226580135440181 0.0 22-23 0.0 0.0 0.0 0.0017635440180586907 0.0 24-25 0.0 0.0 0.0 0.0020574680210684727 0.0 26-27 0.0 0.0 0.0 0.002792278028592927 0.0 28-29 0.0 0.0 0.0 0.0038210120391271637 0.0 30-31 0.0 0.0 0.0 0.005878480060195636 0.0 32-33 0.0 0.0 0.0 0.012638732129420616 0.0 34-35 0.0 0.0 0.0 0.019839870203160272 0.0 36-37 0.0 0.0 0.0 0.029098476297968398 0.0 38-39 0.0 0.0 0.0 0.04790961249059443 0.0 40-41 0.0 0.0 0.0 0.07289315274642588 0.0 42-43 0.0 0.0 0.0 0.08905897291196388 0.0 44-45 0.0 0.0 0.0 0.11727567720090294 0.0 46-47 0.0 0.0 0.0 0.15225263355906696 0.0 48-49 0.0 0.0 0.0 0.18487819789315274 0.0 50-51 0.0 0.0 0.0 0.22176566027088035 0.0 52-53 0.0 0.0 0.0 0.2582122366440933 0.0 54-55 0.0 0.0 0.0 0.3005372930775019 0.0 56-57 0.0 0.0 0.0 0.355648043641836 0.0 58-59 0.0 0.0 0.0 0.405468162151994 0.0 60-61 0.0 0.0 0.0 0.464693848758465 0.0 62-63 0.0 0.0 0.0 0.5325902934537246 0.0 64-65 0.0 0.0 0.0 0.5981353461249059 0.0 66-67 0.0 0.0 0.0 0.6714693848758465 0.0 68-69 0.0 0.0 0.0 0.7580300037622272 0.0 70-71 0.0 0.0 0.0 0.8529674567343868 0.0 72-73 0.0 0.0 0.0 0.9515789597441685 0.0 74-75 0.0 0.0 0.0 1.0606247648607976 0.0 76-77 0.0 0.0 0.0 1.1711401899924756 0.0 78-79 0.0 0.0 0.0 1.2970866252821671 0.0 80-81 0.0 0.0 0.0 1.431703818660647 0.0 82-83 0.0 0.0 0.0 1.583956452219714 0.0 84-85 0.0 0.0 0.0 1.75090528592927 0.0 86-87 0.0 0.0 0.0 1.930198927765237 0.0 88-89 0.0 0.0 0.0 2.136386615876599 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTGC 180 0.0 55.406036 8 CCGTGCG 165 0.0 54.686478 9 AAACCGT 150 0.0 53.82301 6 AACCGTG 165 0.0 51.808243 7 GGTATCA 545 0.0 49.050293 1 GTATCAA 925 0.0 43.349854 1 ATGCGGG 75 6.9170346E-6 37.992714 8 GTATAAC 130 1.9463187E-10 36.72034 1 AATGCGG 80 1.0767957E-5 35.618168 7 TGGTATC 265 0.0 34.050068 2 AAATGCG 90 2.4111678E-5 31.660593 6 ATCAACG 1250 0.0 31.533949 3 TCAACGC 1295 0.0 30.804901 4 GTCTTAG 95 3.3675486E-5 30.149334 1 ATAACTC 95 3.4882643E-5 29.994246 3 TATCAAC 1370 0.0 29.465149 2 CTAGACG 65 0.005843842 29.225163 4 GTTCCGG 295 0.0 28.97749 6 GTCTAAT 385 0.0 28.517878 1 CAACGCA 1400 0.0 28.494534 5 >>END_MODULE