##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224501_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 977707 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.200104939414366 34.0 31.0 34.0 31.0 34.0 2 32.36279273851982 34.0 31.0 34.0 31.0 34.0 3 32.509164811134625 34.0 31.0 34.0 31.0 34.0 4 35.79503368596113 37.0 37.0 37.0 35.0 37.0 5 35.807866773992615 37.0 37.0 37.0 35.0 37.0 6 35.90845110038079 37.0 37.0 37.0 35.0 37.0 7 35.87417805129758 37.0 37.0 37.0 35.0 37.0 8 35.912554579234886 37.0 37.0 37.0 35.0 37.0 9 37.641600193104885 39.0 39.0 39.0 35.0 39.0 10-11 37.715583503033116 39.0 39.0 39.0 35.0 39.0 12-13 37.705492033911995 39.0 39.0 39.0 35.0 39.0 14-15 39.1895977015609 41.0 40.0 41.0 36.0 41.0 16-17 39.0323905832729 41.0 40.0 41.0 36.0 41.0 18-19 39.11332280529852 41.0 40.0 41.0 36.0 41.0 20-21 39.17052552554088 41.0 40.0 41.0 36.0 41.0 22-23 39.11923050566274 41.0 40.0 41.0 36.0 41.0 24-25 39.059348557389896 41.0 39.5 41.0 35.5 41.0 26-27 38.88155091453779 41.0 39.0 41.0 35.0 41.0 28-29 38.808578643704095 41.0 39.0 41.0 35.0 41.0 30-31 38.74467708628454 41.0 39.0 41.0 35.0 41.0 32-33 38.55809000037844 41.0 39.0 41.0 35.0 41.0 34-35 38.55176397427859 40.0 39.0 41.0 35.0 41.0 36-37 38.543566221782186 40.0 39.0 41.0 35.0 41.0 38-39 38.41764199294881 40.0 38.0 41.0 34.5 41.0 40-41 38.3098852723771 40.0 38.0 41.0 34.0 41.0 42-43 38.156519284407295 40.0 38.0 41.0 33.5 41.0 44-45 37.96798427340707 40.0 38.0 41.0 33.0 41.0 46-47 37.78488493996667 40.0 37.0 41.0 33.0 41.0 48-49 37.56444057370971 40.0 37.0 41.0 33.0 41.0 50-51 36.25010100162932 38.5 35.0 40.0 30.5 40.5 52-53 36.561637586720764 39.0 35.0 40.0 31.5 40.5 54-55 36.985665951046684 39.0 35.0 41.0 32.0 41.0 56-57 36.814274624197225 39.0 35.0 41.0 32.0 41.0 58-59 36.65915606618343 39.0 35.0 41.0 32.0 41.0 60-61 36.397572585651936 38.0 35.0 41.0 31.0 41.0 62-63 36.11685862942579 37.0 35.0 41.0 31.0 41.0 64-65 35.86472225319037 37.0 35.0 40.0 31.0 41.0 66-67 35.646541857632194 36.0 35.0 40.0 30.5 41.0 68-69 35.360541552837404 36.0 35.0 39.5 30.0 41.0 70-71 35.08440156406776 35.0 35.0 39.0 30.0 41.0 72-73 34.780186702151056 35.0 34.5 39.0 29.0 41.0 74-75 34.51292923135459 35.0 34.0 37.5 29.0 40.0 76-77 34.200299271663184 35.0 34.0 37.0 29.0 39.0 78-79 33.976027582905715 35.0 34.0 37.0 29.0 39.0 80-81 33.68279453865013 35.0 34.0 36.0 29.0 39.0 82-83 33.43076504515156 35.0 34.0 36.0 29.0 37.0 84-85 33.20990337596028 35.0 34.0 35.5 28.0 37.0 86-87 32.997490556986904 35.0 34.0 35.0 27.5 36.5 88-89 32.85162374821905 35.0 33.5 35.0 27.0 36.0 90-91 32.67958907934586 35.0 33.0 35.0 27.0 36.0 92-93 32.546464329292924 35.0 33.0 35.0 27.0 36.0 94-95 32.417177641154254 35.0 33.0 35.0 26.0 35.5 96-97 32.29059523967814 35.0 33.0 35.0 25.5 35.0 98-99 32.247566499984146 35.0 33.0 35.0 25.0 35.0 100-101 31.010684182480027 34.0 31.0 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 5.0 7 237.0 8 661.0 9 497.0 10 569.0 11 1001.0 12 1543.0 13 1737.0 14 1998.0 15 1908.0 16 2115.0 17 2221.0 18 2496.0 19 2874.0 20 3308.0 21 4334.0 22 5181.0 23 5077.0 24 5154.0 25 5465.0 26 5557.0 27 5927.0 28 6549.0 29 7613.0 30 9363.0 31 11827.0 32 16090.0 33 22923.0 34 38302.0 35 70001.0 36 150617.0 37 244163.0 38 263379.0 39 77007.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.437193012647754 19.169225001306057 13.326490620464012 24.06709136558218 2 16.151362320204317 19.78701185528998 38.50243477851749 25.559191045988218 3 20.37522488843795 26.139835349445185 27.81119496945404 25.673744792662834 4 13.039796176155024 16.412483494543867 38.5824178409278 31.965302488373304 5 13.991205954340105 39.11652468479821 33.473320739239874 13.418948621621816 6 29.905176090587464 36.78576506049359 19.282054848743027 14.027004000175921 7 27.627295293988897 30.946285543624008 21.920166266580885 19.50625289580621 8 26.274436001787855 34.22896634676851 20.601161697727438 18.895435953716195 9 27.214901805960274 15.412081533629197 19.844288728627287 37.528727931783244 10-11 26.43394186601917 24.83443403800934 27.19357639865522 21.53804769731627 12-13 26.602550661905866 22.495082882704125 27.558511905918643 23.343854549471367 14-15 23.747952431963444 24.544675095331495 24.65691405278812 27.05045841991694 16-17 23.680096371681913 27.281036138868973 25.818317476936965 23.22055001251215 18-19 23.764730194097385 26.761613055358623 26.23097312631522 23.24268362422877 20-21 24.90242753239498 24.99262035472433 26.031909739648164 24.073042373232532 22-23 24.959075806599348 25.797414112923654 25.294042696253193 23.94946738422381 24-25 24.135327770119762 25.665731508026425 25.882497359476858 24.31644336237696 26-27 23.899695921170657 26.807264344021263 26.08532003964378 23.207719695164297 28-29 23.665525561338928 26.818208318033932 26.19465749963946 23.32160862098768 30-31 23.81066106717043 25.814482252863076 26.2061640143724 24.168692665594087 32-33 23.65355878601667 26.05187443682003 26.504412876250242 23.790153900913054 34-35 24.414522960355196 25.410271175311212 25.982119387505666 24.193086476827926 36-37 23.378500654978165 25.784196330792362 26.708991742825035 24.128311271404435 38-39 23.706696833597395 26.105356505409283 25.79865823983733 24.389288421155992 40-41 24.302989543884234 25.605234962141648 26.41149891449715 23.680276579476963 42-43 24.092954750020457 26.000480729891173 26.330547827510024 23.57601669257835 44-45 24.132994687086367 25.423938593602003 26.126206759695503 24.316859959616128 46-47 24.031483869911945 25.433181924646135 25.966214827141464 24.569119378300453 48-49 23.492416439690007 25.90796629256004 26.283948053967087 24.31566921378286 50-51 23.77159005714391 26.09882101693043 25.967237628451063 24.1623512974746 52-53 24.048513511716703 25.97869300311852 25.320162379935912 24.652631105228867 54-55 24.15861807269458 25.290092021433825 25.87313990796834 24.678149997903258 56-57 24.049996573615612 25.723708636636538 25.842711569007893 24.383583220739958 58-59 24.207226007078706 25.881002066327053 26.18133554287117 23.73043638372307 60-61 23.98447377789053 26.19986047063541 25.698260588478394 24.117405162995667 62-63 23.61355937752251 25.673411093571126 26.54736973489154 24.16565979401483 64-65 24.509741724829144 25.00140695043748 25.71700752385932 24.77184380087405 66-67 23.719601827803107 25.742787962359614 25.3719693893104 25.165640820526882 68-69 23.858323608197548 25.72877150311903 26.647042518873242 23.76586236981018 70-71 24.247448366432888 25.395235996060165 26.267174112489734 24.09014152501721 72-73 23.931402761768098 25.757154239460288 26.421105709583752 23.890337289187865 74-75 24.043757485627086 25.388076386893005 26.441970856299484 24.126195271180425 76-77 23.790358461174975 25.056791042715247 25.81755065679186 25.335299839317916 78-79 24.064104931341355 24.472317883369044 26.450265893375658 25.013311291913947 80-81 23.772836701434994 25.69617241405776 25.851209983805486 24.67978090070176 82-83 23.432748995789762 25.961655055126037 26.215783816085885 24.389812132998316 84-85 23.688300102409016 24.943705733165686 26.800470201636294 24.567523962789004 86-87 23.730822976559555 26.258969062458902 25.926583525937176 24.083624435044364 88-89 23.951205637768467 25.218690659376637 25.7097854734154 25.120318229439498 90-91 23.591679306786183 25.109925570748704 25.970664012838203 25.32773110962691 92-93 23.582670883434727 25.357272902082883 26.51347470143727 24.546581513045115 94-95 23.882154878711106 24.93124218196249 26.58183893538657 24.60476400393983 96-97 24.275115141857427 25.568703098167443 26.291158803199732 23.865022956775395 98-99 23.00819831001589 25.901821772800798 26.384126443500396 24.705853473682918 100-101 23.832414982170175 25.163231163568827 25.94462265743711 25.059731196823886 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 2.5 2 1.0 3 2.5 4 3.0 5 2.0 6 3.0 7 6.0 8 12.5 9 18.0 10 21.5 11 27.0 12 29.0 13 30.0 14 33.0 15 37.0 16 54.5 17 59.5 18 55.5 19 68.0 20 79.5 21 90.5 22 110.0 23 148.0 24 177.5 25 210.0 26 286.5 27 388.5 28 537.5 29 791.5 30 1256.5 31 2239.0 32 4053.5 33 7071.0 34 10842.0 35 15575.0 36 22310.0 37 28998.0 38 33328.5 39 35407.5 40 35651.0 41 34557.0 42 32962.5 43 31992.0 44 31023.0 45 30708.5 46 32278.0 47 32439.0 48 33690.0 49 37513.0 50 41433.0 51 42133.0 52 41468.5 53 42583.0 54 44583.5 55 45163.0 56 38280.5 57 31915.5 58 30159.5 59 28792.5 60 24514.0 61 18720.0 62 15480.0 63 11245.5 64 6766.0 65 4272.0 66 3274.0 67 2961.5 68 2339.0 69 1476.5 70 875.0 71 559.5 72 391.0 73 303.5 74 239.5 75 164.0 76 107.5 77 71.5 78 56.0 79 37.0 80 20.5 81 18.0 82 17.5 83 12.5 84 10.5 85 13.5 86 10.0 87 7.5 88 5.5 89 2.5 90 4.5 91 5.0 92 4.0 93 5.5 94 4.0 95 4.0 96 5.0 97 3.5 98 3.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1519882746057868 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.033547882954709334 16-17 0.06714690597489842 18-19 0.021274267239571775 20-21 0.03646286668705451 22-23 0.06090781798637015 24-25 0.01580228023323961 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.01979120534065932 38-39 0.0036820847145412686 40-41 0.005062866482494244 42-43 0.0027615635359059514 44-45 0.00910293165539369 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.012989576631853919 60-61 0.013807817679529755 62-63 0.026388273787545758 64-65 0.04254853447914355 66-67 0.014319218334327154 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01570000010228013 80-81 0.05364592868824709 82-83 0.045668078473407675 84-85 0.025979153263707838 86-87 0.05405504921208502 88-89 0.030581759156884426 90-91 0.0 92-93 0.002352443012068033 94-95 0.0 96-97 0.0 98-99 5.625407202771383E-4 100-101 0.04213941395530563 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 977707.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.310412550184545 #Duplication Level Percentage of deduplicated Percentage of total 1 71.01136424884616 31.46542845617799 2 15.238465714087926 13.50445404846157 3 5.817319999997645 7.733035474090055 4 2.7142485211978027 4.810778869520118 5 1.4848728251386774 3.289766373322642 6 0.9054771651127909 2.4073240044551603 7 0.5819217083253313 1.804963367746251 8 0.40288842893563936 1.428172199826711 9 0.29464694855742746 1.1750335062509352 >10 1.2946902500403061 10.148616502268458 >50 0.11457031459413435 3.576799649212274 >100 0.12180047299446685 11.574869987399994 >500 0.013300051628800118 4.026990235143762 >1k 0.004433350542933374 3.053767326124064 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3355 0.3431498393690543 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2559 0.26173485512530853 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2078 0.21253811213379878 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1759 0.17991075035772475 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1619 0.1655915320233976 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1531 0.1565908804989634 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1517 0.15515895866553067 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1511 0.1545452778797738 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1504 0.15382931696305743 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1495 0.15290879578442212 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1442 0.1474879488435697 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1271 0.1299980464494987 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1270 0.1298957663185392 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1194 0.12212247636561875 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1182 0.12089511479410497 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1101 0.11261042418638713 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 1051 0.10749641763841314 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 1050 0.10739413750745366 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1047 0.10708729711457522 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.0456026191895937E-4 0.0 18-19 0.0 0.0 0.0 2.0456026191895937E-4 0.0 20-21 0.0 0.0 0.0 2.557003273986992E-4 0.0 22-23 0.0 0.0 0.0 4.6026058931765857E-4 0.0 24-25 0.0 0.0 0.0 0.001022801309594797 0.0 26-27 0.0 0.0 0.0 0.001994462553709854 0.0 28-29 0.0 0.0 0.0 0.0034263843871425695 0.0 30-31 0.0 0.0 0.0 0.007773289952920455 0.0 32-33 0.0 0.0 0.0 0.018666123900105042 0.0 34-35 0.0 0.0 0.0 0.03359902302018908 0.0 36-37 0.0 0.0 0.0 0.05901563556361977 0.0 38-39 0.0 0.0 0.0 0.10396775312031109 0.0 40-41 0.0 0.0 0.0 0.15408501729045615 0.0 42-43 0.0 0.0 0.0 0.2034351804784051 0.0 44-45 0.0 0.0 0.0 0.262808796500383 0.0 46-47 0.0 0.0 0.0 0.33445602823749854 0.0 48-49 0.0 0.0 0.0 0.4079443023318847 0.0 50-51 0.0 0.0 0.0 0.48383615950381864 0.0 52-53 0.0 0.0 0.0 0.5646374629618076 0.0 54-55 0.0 0.0 0.0 0.6491719911998175 0.0 56-57 0.0 0.0 0.0 0.7466449560042017 0.0 58-59 0.0 0.0 0.0 0.8495387677494383 0.0 60-61 0.0 0.0 0.0 0.964399354816934 0.0 62-63 0.0 0.0 0.0 1.0931700396949189 0.0 64-65 0.0 0.0 0.0 1.214065154489024 0.0 66-67 0.0 0.0 0.0 1.3554674355405045 0.0 68-69 0.0 0.0 0.0 1.5211101076293818 0.0 70-71 0.0 0.0 0.0 1.6900768839744422 0.0 72-73 0.0 0.0 0.0 1.8736185789812285 0.0 74-75 0.0 0.0 0.0 2.0623254206014687 0.0 76-77 0.0 0.0 0.0 2.2658117411453533 0.0 78-79 0.0 0.0 0.0 2.494100993446912 0.0 80-81 0.0 0.0 0.0 2.75200034366124 0.0 82-83 0.0 0.0 0.0 3.0300488796745855 0.0 84-85 0.0 0.0 0.0 3.312802301712067 0.0 86-87 0.0 0.0 0.0 3.612227385095944 0.0 88-89 0.0 0.0 0.0 3.9431036087498605 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 785 0.0 56.33038 1 GTATCAA 1750 0.0 49.449593 1 ATCAACG 2200 0.0 38.625195 3 TCAACGC 2310 0.0 36.7859 4 GTCTAAT 300 0.0 33.283382 1 CGCAGAG 2790 0.0 30.800598 8 TATCAAC 2850 0.0 30.648788 2 ACGCAGA 2875 0.0 29.721792 7 AATGCGG 290 0.0 29.46557 7 AAATGCG 305 0.0 28.016443 6 TCGCACC 1105 0.0 27.969227 1 CAACGCA 3130 0.0 27.30037 5 CGAATAC 35 0.0084064 27.133972 40-41 AACGCAG 3170 0.0 27.105639 6 GTACATG 4995 0.0 26.653358 1 GTATTGG 275 0.0 25.935102 1 ATGCGGG 330 0.0 25.896635 8 TACATGG 5195 0.0 25.586615 2 CGCACCA 1210 0.0 25.501654 2 TCGGTTG 150 1.0553085E-6 25.345785 9 >>END_MODULE