##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224501_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 977707 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.14574100420678 34.0 33.0 34.0 31.0 34.0 2 33.27230039265342 34.0 33.0 34.0 31.0 34.0 3 33.39205815239126 34.0 34.0 34.0 31.0 34.0 4 36.613390310184954 37.0 37.0 37.0 35.0 37.0 5 36.645086922769295 37.0 37.0 37.0 35.0 37.0 6 36.69077954847413 37.0 37.0 37.0 36.0 37.0 7 36.67213592620284 37.0 37.0 37.0 35.0 37.0 8 36.661146948932554 37.0 37.0 37.0 35.0 37.0 9 38.506942263888874 39.0 39.0 39.0 37.0 39.0 10-11 38.53018798065269 39.0 39.0 39.0 37.5 39.0 12-13 38.5171355017403 39.0 39.0 39.0 37.0 39.0 14-15 40.113713515398786 41.0 40.0 41.0 38.0 41.0 16-17 40.12387760341288 41.0 40.0 41.0 38.0 41.0 18-19 40.11271372711866 41.0 40.0 41.0 38.0 41.0 20-21 40.11322870757804 41.0 40.0 41.0 38.0 41.0 22-23 40.04178450190088 41.0 40.0 41.0 38.0 41.0 24-25 40.0060708371731 41.0 40.0 41.0 38.0 41.0 26-27 39.939899172246896 41.0 40.0 41.0 38.0 41.0 28-29 39.9150399864172 41.0 40.0 41.0 38.0 41.0 30-31 39.867281813467635 41.0 40.0 41.0 38.0 41.0 32-33 39.82680547444173 41.0 40.0 41.0 38.0 41.0 34-35 39.75119028502404 41.0 40.0 41.0 37.0 41.0 36-37 39.631791528545875 41.0 40.0 41.0 37.0 41.0 38-39 39.51889625419476 41.0 40.0 41.0 36.5 41.0 40-41 39.389100722404564 41.0 39.0 41.0 36.0 41.0 42-43 39.2899350214328 41.0 39.0 41.0 35.5 41.0 44-45 39.03718240740835 41.0 39.0 41.0 35.0 41.0 46-47 38.808224754450976 40.0 38.0 41.0 35.0 41.0 48-49 38.697329056660124 40.0 38.0 41.0 35.0 41.0 50-51 38.52532456042557 40.0 37.0 41.0 35.0 41.0 52-53 38.25595858472937 40.0 37.0 41.0 35.0 41.0 54-55 38.04918907198169 40.0 36.0 41.0 35.0 41.0 56-57 37.797136054053 39.0 35.5 41.0 34.0 41.0 58-59 37.518754596213384 39.0 35.0 41.0 34.0 41.0 60-61 37.259882050552974 39.0 35.0 41.0 34.0 41.0 62-63 37.04338518595039 38.0 35.0 41.0 34.0 41.0 64-65 36.78004146436509 37.0 35.0 40.5 33.0 41.0 66-67 36.510845273686286 37.0 35.0 40.0 33.0 41.0 68-69 36.258773845334034 36.0 35.0 40.0 33.0 41.0 70-71 35.98552736146924 36.0 35.0 39.0 33.0 41.0 72-73 35.69468153547024 35.0 35.0 39.0 33.0 41.0 74-75 35.3894183022112 35.0 35.0 38.5 32.5 40.5 76-77 33.55911689289327 34.5 32.5 35.5 29.0 39.0 78-79 34.85777743229822 35.0 34.5 37.0 32.0 39.0 80-81 34.78305565982447 35.0 35.0 36.5 33.0 39.0 82-83 34.584062505433636 35.0 35.0 36.0 33.0 37.0 84-85 34.38816843901087 35.0 35.0 36.0 33.0 37.0 86-87 34.208968535563315 35.0 35.0 35.5 32.0 37.0 88-89 34.06848115028326 35.0 35.0 35.0 32.0 36.0 90-91 33.929260504425145 35.0 35.0 35.0 32.0 36.0 92-93 33.841215210691956 35.0 34.5 35.0 32.0 36.0 94-95 33.73914373119963 35.0 34.0 35.0 32.0 36.0 96-97 33.705575392218734 35.0 34.0 35.0 31.5 35.0 98-99 33.68128999792371 35.0 34.0 35.0 31.0 35.0 100-101 32.841141057597014 34.5 33.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 8.0 15 49.0 16 90.0 17 203.0 18 375.0 19 551.0 20 796.0 21 1120.0 22 1672.0 23 1734.0 24 1971.0 25 2563.0 26 3361.0 27 4814.0 28 6001.0 29 6848.0 30 7353.0 31 8117.0 32 9723.0 33 13337.0 34 22824.0 35 48475.0 36 141051.0 37 280651.0 38 313856.0 39 100155.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.952300004727654 18.96406775759046 13.248023120294183 23.8356091173877 2 16.03844505562505 19.87926853341543 38.92024911348697 25.162037297472555 3 20.031256808021215 26.587106362130985 28.01330050822997 25.368336321617825 4 13.109039824814591 16.646193593786275 38.78186409629879 31.46290248510034 5 13.80904504110127 38.22699438584361 34.36919240631396 13.594768166741162 6 29.989557198629036 36.29369535044752 19.605771463229782 14.110975987693655 7 27.75422493650961 30.6025220234692 22.188242489825686 19.45501055019551 8 26.21920473106974 34.02911097087369 20.316822933660085 19.43486136439649 9 27.083983238332138 15.622062642489007 19.96733172617154 37.32662239300731 10-11 26.511981605941248 24.865322637559107 27.210094639805178 21.412601116694468 12-13 26.86162623362623 22.788166597968512 27.43505978785055 22.915147380554707 14-15 23.790563021436892 24.81285293037689 24.750615470688047 26.64596857749817 16-17 23.415757481535877 27.432707344838487 25.948929485009316 23.202605688616323 18-19 23.49758158630346 26.78982558169267 26.657168251838232 23.05542458016563 20-21 24.667638334867547 25.388002454740715 26.35593740411169 23.588421806280042 22-23 24.825456635716286 25.878700288638367 25.65782340896027 23.63801966668508 24-25 24.38707196294995 25.48561451849715 25.943421555285877 24.18389196326702 26-27 23.798922965985977 26.97709384924592 26.0796677866593 23.144315398108798 28-29 23.659398758485676 26.68069311234692 26.58960986092544 23.070298268241967 30-31 23.801112408944274 25.688914163678355 26.570372446297323 23.939600981080048 32-33 23.717291436642796 26.11259104854064 26.914774525892998 23.255342988923566 34-35 24.477884134950017 25.643142110331546 25.95029766881921 23.928676085899227 36-37 23.280250917081887 25.83416991112245 26.668173614737135 24.217405557058527 38-39 23.667724584154556 26.01991189589519 26.0383223194679 24.27404120048235 40-41 23.842623608095266 25.977823622005364 26.484826231171503 23.69472653872786 42-43 23.90736693099262 25.957981276599227 26.60469854465602 23.52995324775214 44-45 24.097600693932996 25.519631429927497 26.326543346262742 24.05622452987676 46-47 23.868094342915604 25.43761013506148 26.240281372530454 24.454014149492465 48-49 23.515495550782447 25.466093893832465 26.660274112713513 24.358136442671576 50-51 23.908134031974814 25.64311189344047 26.393183233831813 24.055570840752903 52-53 24.028262045786725 25.985034371238008 25.708417757058093 24.27828582591717 54-55 24.173448691683706 25.267897233015617 26.11048095185981 24.448173123440867 56-57 24.395858425454982 25.46076167534822 25.93537036610844 24.208009533088358 58-59 24.33996366711465 25.6886084484446 26.19359565110403 23.777832233336728 60-61 23.951917228636656 26.295182463978588 25.77305296133418 23.979847346050573 62-63 23.774249340548856 25.631451958511086 26.48733209438001 24.106966606560043 64-65 24.084464977748958 25.284210913903653 26.04936857361152 24.581955534735865 66-67 23.780181588144504 25.638151307088936 25.834120038007296 24.747547066759264 68-69 24.076845107992476 25.57294772360226 26.485337631826305 23.864869536578954 70-71 24.409613514069143 25.506567918609562 26.208363037188033 23.87545553013326 72-73 23.84364640940486 25.690621014271148 26.411286817011643 24.05444575931235 74-75 24.08819820252898 25.333305376764205 26.337747402851775 24.24074901785504 76-77 24.088388579178496 24.844495607317334 26.085155499278667 24.9819603142255 78-79 24.109537898179568 24.641526513766397 26.142264250334346 25.10667133771969 80-81 23.49399716159718 25.765537698336594 26.075920882717707 24.664544257348524 82-83 23.29573320255027 25.716566576369758 26.581299692492742 24.40640052858723 84-85 23.782514107217924 25.03572192032043 26.658064766884426 24.523699205577223 86-87 23.483773768623934 26.091354567370388 26.164842841464775 24.260028822540907 88-89 23.99747572636792 25.039863681041457 25.633906681654118 25.32875391093651 90-91 23.909463673677287 25.100566938765905 25.77254739916969 25.217421988387112 92-93 23.90097442280765 25.374268569213477 26.32649658844623 24.39826041953264 94-95 23.817820676337593 24.967091367863787 26.295914829289345 24.91917312650927 96-97 24.181119701505665 25.540729482350027 26.111043492580087 24.167107323564217 98-99 22.604573762896248 25.960078019283895 26.52742590571613 24.90792231210373 100-101 23.44274039617843 25.401167759202114 26.103614322193053 25.052477522426404 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 2.0 3 3.5 4 2.5 5 2.5 6 5.0 7 9.0 8 15.5 9 16.0 10 20.0 11 28.0 12 26.5 13 23.0 14 24.5 15 27.5 16 35.0 17 49.5 18 57.5 19 70.0 20 84.0 21 91.5 22 112.0 23 143.0 24 173.5 25 231.5 26 311.5 27 413.5 28 544.0 29 785.5 30 1240.5 31 2230.0 32 4079.5 33 6979.5 34 10628.5 35 15591.0 36 22252.5 37 28625.5 38 33031.0 39 35387.0 40 35423.0 41 34181.5 42 32978.0 43 32434.5 44 32291.5 45 32087.0 46 32089.0 47 32793.0 48 34695.0 49 38908.0 50 43888.0 51 43468.5 52 40663.5 53 41731.0 54 45301.5 55 45197.0 56 37699.5 57 31664.5 58 30582.0 59 29757.5 60 24657.5 61 18111.5 62 14650.0 63 10220.0 64 5850.0 65 3483.0 66 2577.5 67 2328.5 68 1733.5 69 994.5 70 560.5 71 375.0 72 276.0 73 217.5 74 164.5 75 123.0 76 79.0 77 43.5 78 33.5 79 16.0 80 5.5 81 2.0 82 3.5 83 4.5 84 3.0 85 2.5 86 1.0 87 0.5 88 0.5 89 0.0 90 0.5 91 0.5 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4816371366881898 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 7.159609167163577E-4 22-23 0.001329641702473236 24-25 2.557003273986992E-4 26-27 0.0022501628811085533 28-29 0.0030684039287843905 30-31 9.205211786353171E-4 32-33 5.1140065479739843E-5 34-35 0.0027104234704262114 36-37 0.0013807817679529757 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.00930749191731265 46-47 0.07993192234483337 48-49 7.159609167163577E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.006085667792089041 58-59 0.036360586556095024 60-61 0.027359935031660815 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 1.5342019643921952E-4 78-79 0.005574267137291642 80-81 0.004551465827696845 82-83 6.64820851236618E-4 84-85 0.001636482095351675 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06361824145679636 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 977707.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.26294953623794 #Duplication Level Percentage of deduplicated Percentage of total 1 69.19641230323174 29.244444812601973 2 16.0004814346463 13.524550788559372 3 6.166296914352396 7.818176859502052 4 2.9935401706357485 5.06063348665119 5 1.610963746337681 3.404203975808911 6 0.9628023764816869 2.44145209503693 7 0.650721930445916 1.925099967599136 8 0.43658946307688656 1.476124675685734 9 0.30002544386133884 1.1411964174149238 >10 1.4036923999181206 10.476801613190087 >50 0.12492679492981908 3.71284073753176 >100 0.1338988249597697 12.414751988955095 >500 0.014554220090888434 4.2199228391245756 >1k 0.005093977031810952 3.1397997423382256 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2207 0.22573224902757166 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1991 0.20363974074032407 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1968 0.20128729772825601 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1955 0.19995765602578278 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1856 0.18983192306079427 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1736 0.17755830734565672 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1567 0.16027296521350465 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1519 0.15536351892744962 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1493 0.15270423552250317 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1409 0.14411270452190686 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1315 0.1344983722117158 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1313 0.13429381194979684 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1312 0.13419153181883733 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1236 0.12641824186591688 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1234 0.12621368160399793 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1175 0.12017915387738862 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1116 0.11414462615077932 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1107 0.11322410497214401 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 1075 0.10995114078144066 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1040 0.10637133619785885 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1003 0.10258697135235811 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 2.0456026191895937E-4 0.0 18-19 0.0 0.0 0.0 2.0456026191895937E-4 0.0 20-21 0.0 0.0 0.0 2.557003273986992E-4 0.0 22-23 0.0 0.0 0.0 4.6026058931765857E-4 0.0 24-25 0.0 0.0 0.0 0.001022801309594797 0.0 26-27 0.0 0.0 0.0 0.001994462553709854 0.0 28-29 0.0 0.0 0.0 0.003528664518102049 0.0 30-31 0.0 0.0 0.0 0.008233550542238115 0.0 32-33 0.0 0.0 0.0 0.019177524554902438 0.0 34-35 0.0 0.0 0.0 0.03421270380594595 0.0 36-37 0.0 0.0 0.0 0.05988501667677536 0.0 38-39 0.0 0.0 0.0 0.10524625475730459 0.0 40-41 0.0 0.0 0.0 0.15551693912388886 0.0 42-43 0.0 0.0 0.0 0.20548078309759468 0.0 44-45 0.0 0.0 0.0 0.26526351964341055 0.0 46-47 0.0 0.0 0.0 0.3376778523627222 0.0 48-49 0.0 0.0 0.0 0.41121726652258805 0.0 50-51 0.0 0.0 0.0 0.488285345200556 0.0 52-53 0.0 0.0 0.0 0.5701605900336195 0.0 54-55 0.0 0.0 0.0 0.656740720890819 0.0 56-57 0.0 0.0 0.0 0.7548785065464398 0.0 58-59 0.0 0.0 0.0 0.8581814388155142 0.0 60-61 0.0 0.0 0.0 0.9747296480438413 0.0 62-63 0.0 0.0 0.0 1.1056482156719754 0.0 64-65 0.0 0.0 0.0 1.228793493347189 0.0 66-67 0.0 0.0 0.0 1.3722925170833389 0.0 68-69 0.0 0.0 0.0 1.5404410523807233 0.0 70-71 0.0 0.0 0.0 1.7137547342915618 0.0 72-73 0.0 0.0 0.0 1.9017456149950855 0.0 74-75 0.0 0.0 0.0 2.0946970820501436 0.0 76-77 0.0 0.0 0.0 2.300126725082259 0.0 78-79 0.0 0.0 0.0 2.5310752607887643 0.0 80-81 0.0 0.0 0.0 2.791685034473518 0.0 82-83 0.0 0.0 0.0 3.0739270558562026 0.0 84-85 0.0 0.0 0.0 3.360771683132063 0.0 86-87 0.0 0.0 0.0 3.6652084929329543 0.0 88-89 0.0 0.0 0.0 3.999459960908534 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 850 0.0 49.43572 1 GTATCAA 1835 0.0 47.620304 1 CCGTGCG 195 0.0 43.833855 9 AAACCGT 205 0.0 39.379196 6 ATCAACG 2285 0.0 36.783993 3 AACCGTG 235 0.0 36.372776 7 TCAACGC 2360 0.0 35.61501 4 TCGGCGC 55 0.0025829882 34.535767 7 TGCGCCG 55 0.0025829882 34.535767 5 ACCGTGC 255 0.0 33.520008 8 ACGCAGA 2755 0.0 30.508682 7 CGCAGAG 2770 0.0 30.343473 8 TATCACG 80 4.5005415E-4 29.679174 2 TCGCACC 950 0.0 29.655518 1 CAACGCA 2840 0.0 29.595572 5 AACGCAG 2885 0.0 29.133942 6 CGCACCA 990 0.0 28.779804 2 GTACATG 5020 0.0 28.25074 1 TACATGG 5120 0.0 27.453236 2 TTGCGCC 70 0.008402456 27.135244 4 >>END_MODULE