##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224497_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225393 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29042029781466 34.0 31.0 34.0 31.0 34.0 2 32.45678243632859 34.0 31.0 34.0 31.0 34.0 3 32.599375873699294 34.0 31.0 34.0 31.0 34.0 4 35.88170978616656 37.0 37.0 37.0 35.0 37.0 5 35.89933188781069 37.0 37.0 37.0 35.0 37.0 6 35.99440342812469 37.0 37.0 37.0 35.0 37.0 7 35.953534906760524 37.0 37.0 37.0 35.0 37.0 8 35.988384950787214 37.0 37.0 37.0 35.0 37.0 9 37.72625435268522 39.0 39.0 39.0 35.0 39.0 10-11 37.8039702364874 39.0 39.0 39.0 36.0 39.0 12-13 37.800164926680665 39.0 39.0 39.0 35.0 39.0 14-15 39.3053032782136 41.0 40.0 41.0 37.0 41.0 16-17 39.14591930915225 41.0 40.0 41.0 36.5 41.0 18-19 39.226418381694685 41.0 40.0 41.0 36.5 41.0 20-21 39.291696215010205 41.0 40.0 41.0 37.0 41.0 22-23 39.25008058639147 41.0 40.0 41.0 36.5 41.0 24-25 39.18918175638346 41.0 40.0 41.0 36.0 41.0 26-27 39.028848704048414 41.0 39.0 41.0 35.5 41.0 28-29 38.961327916839736 41.0 39.0 41.0 35.0 41.0 30-31 38.890313148516434 41.0 39.0 41.0 35.0 41.0 32-33 38.70211760635159 41.0 39.0 41.0 35.0 41.0 34-35 38.7053528949488 41.0 39.0 41.0 35.0 41.0 36-37 38.695849821241026 41.0 39.0 41.0 35.0 41.0 38-39 38.585748408877805 41.0 39.0 41.0 35.0 41.0 40-41 38.494144735607264 40.0 39.0 41.0 35.0 41.0 42-43 38.345642989636794 40.0 38.0 41.0 34.0 41.0 44-45 38.17079010570487 40.0 38.0 41.0 34.0 41.0 46-47 38.00714423862385 40.0 38.0 41.0 33.0 41.0 48-49 37.791385702382826 40.0 37.0 41.0 33.0 41.0 50-51 36.495487162077794 38.5 35.5 40.0 31.0 40.5 52-53 36.80614790520266 39.0 35.5 40.0 31.5 40.5 54-55 37.25036743314186 40.0 36.0 41.0 33.0 41.0 56-57 37.088399395132825 39.0 35.0 41.0 32.0 41.0 58-59 36.934595268619944 39.0 35.0 41.0 32.0 41.0 60-61 36.68822655262434 39.0 35.0 41.0 32.0 41.0 62-63 36.41373502215208 38.0 35.0 41.0 31.5 41.0 64-65 36.17391400146728 37.5 35.0 41.0 31.0 41.0 66-67 35.950503634344244 37.0 35.0 40.0 31.0 41.0 68-69 35.6724352921879 36.5 35.0 40.0 31.0 41.0 70-71 35.39992679899429 36.0 35.0 39.5 30.0 41.0 72-73 35.10378507140158 35.5 35.0 39.0 30.0 41.0 74-75 34.83952454437066 35.0 35.0 39.0 30.0 41.0 76-77 34.522601320555935 35.0 34.0 37.5 29.0 40.0 78-79 34.28422391836742 35.0 34.0 37.0 29.0 39.0 80-81 33.9734717759935 35.0 34.0 37.0 29.0 39.0 82-83 33.708137715818516 35.0 34.0 36.0 29.0 38.5 84-85 33.4710847866766 35.0 34.0 36.0 29.0 37.0 86-87 33.2336368822084 35.0 34.0 35.5 29.0 37.0 88-89 33.08452186359804 35.0 34.0 35.0 29.0 36.5 90-91 32.90342771665907 35.0 34.0 35.0 27.5 36.0 92-93 32.76200737232871 35.0 34.0 35.0 27.0 36.0 94-95 32.63350614863966 35.0 33.0 35.0 27.0 36.0 96-97 32.50206872407465 35.0 33.0 35.0 27.0 35.5 98-99 32.46285273377602 35.0 33.0 35.0 27.0 35.0 100-101 31.286246126752808 34.5 31.0 35.0 23.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 8.0 7 274.0 8 841.0 9 590.0 10 623.0 11 1134.0 12 1782.0 13 2160.0 14 2172.0 15 2273.0 16 2446.0 17 2651.0 18 2987.0 19 3433.0 20 4110.0 21 5276.0 22 6386.0 23 6141.0 24 5970.0 25 6471.0 26 6709.0 27 6949.0 28 7485.0 29 8821.0 30 10727.0 31 13589.0 32 18141.0 33 25824.0 34 42589.0 35 77926.0 36 170235.0 37 295642.0 38 349509.0 39 133503.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.93746644033388 20.469986523010185 13.971200596289373 23.621346440366565 2 15.40917893279952 20.73865282403278 39.139198608120005 24.712969635047696 3 18.714893915666238 27.76978487717818 29.17749652560444 24.337824681551144 4 12.580453780950274 17.41367871368614 40.11366149472047 29.892206010643118 5 13.275659319091915 39.45077211963836 34.318867498019 12.95470106325073 6 28.35751469120519 38.513276965022655 19.785734046138668 13.343474297633495 7 25.990110927677897 32.02107405542549 23.73426321188386 18.25455180501276 8 25.382387527919615 34.85942877101469 21.448547527201477 18.30963617386422 9 26.421645953583873 15.888127319153936 21.09453865004941 36.59568807721278 10-11 25.322080344836312 25.61557802272414 28.30136943821288 20.760972194226667 12-13 25.694450678272197 23.36532035028762 28.512975021074872 22.427253950365312 14-15 23.132489400496922 25.18361110895681 25.57016081202378 26.11373867852249 16-17 22.997182100190813 27.8135816972487 26.55832799439115 22.630908208169338 18-19 22.94728765378941 27.31614143421823 27.1959872417797 22.54058367021266 20-21 24.128279450200605 25.72744576276237 26.81159863974735 23.33267614728968 22-23 24.37241111802954 26.46291098022804 26.08956077046352 23.0751171312789 24-25 23.47428914700906 26.45445619144242 26.48681870381812 23.584435957730395 26-27 23.250989682493696 27.302506216373036 26.68294987812073 22.763554223012537 28-29 23.07427086657097 27.146352231488187 26.94706922595445 22.8323076759864 30-31 23.278123834557565 26.398877747791932 26.935970745711785 23.387027671938718 32-33 23.162446659969497 26.402713251993443 27.266966597654797 23.167873490382267 34-35 23.7983242926963 26.216936117637363 26.62782470603309 23.35691488363325 36-37 23.195462071493026 26.24262278489692 27.196839872651342 23.36507527095872 38-39 23.05723912318737 26.633638681018784 26.479353020363178 23.82976917543067 40-41 23.68447898202283 26.093662778740782 27.05707514371615 23.16478309552023 42-43 23.515703835668646 26.42874076746017 27.015673436277776 23.039881960593412 44-45 23.47248996541148 26.122535425076432 26.597658296756123 23.807316312755965 46-47 23.747524263644397 25.883288055342245 26.43368290825882 23.935504772754538 48-49 23.13045692279946 26.29625760878347 26.81303059508256 23.760254873334514 50-51 23.228629509063623 26.58236990092158 26.406140723833087 23.782859866181706 52-53 23.50074629118985 26.49390848486975 25.943758451370297 24.061586772570106 54-55 23.582556779743317 25.957305125784135 26.34456864042801 24.11556945404454 56-57 23.468979722407195 26.35173071147845 26.31223314661757 23.867056419496784 58-59 23.80372689868846 26.190641372313607 26.60469588255315 23.40093584644479 60-61 23.540898587891338 26.596672023663288 26.31328717446859 23.549142213976783 62-63 23.189537372474174 26.33913338764422 26.816666476197625 23.654662763683977 64-65 24.09013327389547 25.813545546099654 26.073953601726313 24.022367578278566 66-67 23.29120216065946 26.365073256493016 25.976232909164885 24.367491673682633 68-69 23.373276981343942 26.358278527786595 27.074089700202304 23.194354790667155 70-71 23.819256352859856 25.92772277954909 26.568864029743928 23.684156837847123 72-73 23.499685407049004 26.155241624523722 26.87178725519078 23.47328571323649 74-75 23.604100888449665 25.903893689616307 26.72110090395489 23.77090451797913 76-77 23.267882222274814 25.627002928856296 26.35399418798704 24.751120660881856 78-79 23.60089896371048 25.180941544913292 26.822892967082208 24.39526652429402 80-81 23.17793760954298 26.35882290260274 26.35821050298014 24.10502898487414 82-83 23.072008608766506 26.53147702723225 26.65782439226713 23.738689971734114 84-85 23.377183655860613 25.621031502275233 27.084046746285935 23.91773809557822 86-87 23.318013816552018 26.73859232189684 26.514004966969207 23.429388894581937 88-89 23.57732868943093 25.936600364660357 26.221871376203033 24.26419956970568 90-91 23.213736327855635 25.842852048281657 26.53022336507553 24.41318825878718 92-93 23.338307404102242 25.76238141696954 26.942284865318566 23.957026313609653 94-95 23.62446170330661 25.505939727091636 26.816743689575507 24.052854880026246 96-97 23.648494809420324 26.259738712396757 26.68433718815107 23.40742929003185 98-99 22.809679076502864 26.335957133489828 26.86546397031791 23.988899819689397 100-101 23.523149178149577 25.774854010054476 26.441111095235858 24.26088571656009 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 1.5 2 5.5 3 8.0 4 5.5 5 5.0 6 7.0 7 13.5 8 22.0 9 32.0 10 40.5 11 46.5 12 56.5 13 60.5 14 66.0 15 76.0 16 85.5 17 89.5 18 100.5 19 112.5 20 119.5 21 154.5 22 198.0 23 249.0 24 315.5 25 401.5 26 577.5 27 826.5 28 1131.0 29 1764.5 30 3032.0 31 5743.0 32 10162.0 33 16417.5 34 24548.5 35 33890.5 36 45041.0 37 53102.5 38 53268.0 39 49391.5 40 44606.5 41 39636.5 42 35529.0 43 32685.5 44 31295.0 45 32689.0 46 36036.0 47 37124.0 48 39468.0 49 44771.0 50 48993.0 51 48979.5 52 47603.0 53 49128.5 54 52017.5 55 52149.0 56 44115.0 57 36361.0 58 33859.0 59 32319.5 60 27471.5 61 20830.5 62 16824.5 63 12303.5 64 7570.5 65 4883.5 66 3889.0 67 3327.0 68 2525.0 69 1641.0 70 1020.5 71 678.5 72 505.0 73 380.0 74 279.0 75 198.0 76 138.0 77 91.0 78 60.5 79 42.0 80 30.5 81 21.5 82 19.5 83 18.5 84 13.0 85 13.5 86 13.0 87 12.5 88 10.0 89 6.0 90 3.5 91 4.5 92 5.5 93 5.0 94 3.5 95 3.5 96 5.0 97 5.0 98 4.0 99 2.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14901341855225222 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.037008535220945445 16-17 0.07340502189909685 18-19 0.02452274494794731 20-21 0.038640664668396184 22-23 0.06573401349607841 24-25 0.01713735919823273 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.020605634274065546 38-39 0.005590043357518771 40-41 0.0049779948147247455 42-43 0.0032234556587152044 44-45 0.010690447880802322 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 8.160647237253682E-5 58-59 0.015668442695527068 60-61 0.01664772036399751 62-63 0.028317445913270275 64-65 0.04769898310174776 66-67 0.017259768906791536 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.016688523600183778 80-81 0.05732854684170711 82-83 0.048555851061659404 84-85 0.028929494456064297 86-87 0.05732854684170711 88-89 0.03407070221553412 90-91 0.0 92-93 0.0031418491863426674 94-95 0.0 96-97 0.0 98-99 6.120485427940261E-4 100-101 0.046148460126669566 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1225393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.987439810196854 #Duplication Level Percentage of deduplicated Percentage of total 1 69.092140857316 29.010021056041985 2 15.68807741786149 13.174044126403356 3 6.099830741317502 7.683488283103712 4 2.9436137983597654 4.9437922873238245 5 1.6595229755056635 3.483956052384142 6 1.011017111310644 2.5470012064940857 7 0.6907049520689409 2.0300652821119693 8 0.4966705326551861 1.6683139276286432 9 0.345121624720061 1.304169610061782 >10 1.699268335272492 12.62163620290369 >50 0.12925204584771355 3.7861946308724304 >100 0.1258696198861922 10.975478128122836 >500 0.014773428029994049 4.100420676887768 >1k 0.004136559848398333 2.6714185296598267 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2603 0.2124216475857133 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2599 0.2120952216962232 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2411 0.19675320489018622 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 2087 0.17031270784148433 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1621 0.13228409171588218 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1574 0.12844858751437294 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1537 0.12542914803658908 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1445 0.1179213525783157 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1428 0.11653404254798255 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1420 0.11588119076900227 No Hit ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 1379 0.11253532540172827 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1351 0.11025034417529722 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1308 0.10674126586327816 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1299 0.10600680761192532 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1297 0.10584359466718025 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1259 0.10274254871702385 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 8.160647237253682E-5 0.0 18-19 0.0 0.0 0.0 1.2240970855880522E-4 0.0 20-21 0.0 0.0 0.0 2.8562265330387885E-4 0.0 22-23 0.0 0.0 0.0 5.712453066077577E-4 0.0 24-25 0.0 0.0 0.0 6.528517789802944E-4 0.0 26-27 0.0 0.0 0.0 8.976711960979049E-4 0.0 28-29 0.0 0.0 0.0 0.0016321294474507361 0.0 30-31 0.0 0.0 0.0 0.004488355980489524 0.0 32-33 0.0 0.0 0.0 0.012240970855880523 0.0 34-35 0.0 0.0 0.0 0.02150330547016345 0.0 36-37 0.0 0.0 0.0 0.03737576434662186 0.0 38-39 0.0 0.0 0.0 0.06928389504428376 0.0 40-41 0.0 0.0 0.0 0.10902624708970918 0.0 42-43 0.0 0.0 0.0 0.1462796017277722 0.0 44-45 0.0 0.0 0.0 0.18769488645683466 0.0 46-47 0.0 0.0 0.0 0.2386581284534839 0.0 48-49 0.0 0.0 0.0 0.2992509341900925 0.0 50-51 0.0 0.0 0.0 0.363638440892024 0.0 52-53 0.0 0.0 0.0 0.42590417931226965 0.0 54-55 0.0 0.0 0.0 0.49237265105970085 0.0 56-57 0.0 0.0 0.0 0.5722653875124144 0.0 58-59 0.0 0.0 0.0 0.6599515420767053 0.0 60-61 0.0 0.0 0.0 0.7607355354567882 0.0 62-63 0.0 0.0 0.0 0.8655590492193117 0.0 64-65 0.0 0.0 0.0 0.9785024069829027 0.0 66-67 0.0 0.0 0.0 1.105522881230756 0.0 68-69 0.0 0.0 0.0 1.252496137973695 0.0 70-71 0.0 0.0 0.0 1.412567233532426 0.0 72-73 0.0 0.0 0.0 1.5812478119264595 0.0 74-75 0.0 0.0 0.0 1.750540438863287 0.0 76-77 0.0 0.0 0.0 1.9295034327762604 0.0 78-79 0.0 0.0 0.0 2.1413130318191795 0.0 80-81 0.0 0.0 0.0 2.390049559610672 0.0 82-83 0.0 0.0 0.0 2.65425051391676 0.0 84-85 0.0 0.0 0.0 2.9234294630375723 0.0 86-87 0.0 0.0 0.0 3.197055964902688 0.0 88-89 0.0 0.0 0.0 3.5050387916366423 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1920 0.0 49.278294 1 GGTATCA 930 0.0 48.567352 1 CCGTGCG 215 0.0 46.40506 9 AAACCGT 250 0.0 41.783157 6 ATCAACG 2510 0.0 36.887524 3 TCAACGC 2580 0.0 35.8867 4 AACCGTG 265 0.0 35.834614 7 ACCGTGC 320 0.0 35.6121 8 AATGCGG 295 0.0 30.580894 7 ACGCAGA 3050 0.0 30.20094 7 CGCAGAG 3070 0.0 30.005419 8 GTATAGA 350 0.0 29.885355 1 GTACATG 5405 0.0 29.556118 1 TATCAAC 3275 0.0 28.271048 2 TACCGTA 155 4.605863E-8 27.569534 7 ACATGGG 5505 0.0 27.427637 3 ATCGCGT 35 0.008371476 27.15741 12-13 TGTACCG 210 4.3655746E-11 27.131922 5 TACATGG 5755 0.0 26.978703 2 AAATGCG 340 0.0 26.533422 6 >>END_MODULE