##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224497_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225393 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.169186538522744 34.0 33.0 34.0 31.0 34.0 2 33.29904446981499 34.0 34.0 34.0 31.0 34.0 3 33.41366076026222 34.0 34.0 34.0 31.0 34.0 4 36.62879011060125 37.0 37.0 37.0 35.0 37.0 5 36.65925625493209 37.0 37.0 37.0 35.0 37.0 6 36.69998604529322 37.0 37.0 37.0 36.0 37.0 7 36.67661395160573 37.0 37.0 37.0 36.0 37.0 8 36.666440072695046 37.0 37.0 37.0 35.0 37.0 9 38.509798897170135 39.0 39.0 39.0 37.0 39.0 10-11 38.53623817012175 39.0 39.0 39.0 37.5 39.0 12-13 38.5245072397182 39.0 39.0 39.0 37.0 39.0 14-15 40.13200499758037 41.0 40.0 41.0 38.0 41.0 16-17 40.143655953640994 41.0 40.0 41.0 38.0 41.0 18-19 40.13374403150662 41.0 40.0 41.0 38.0 41.0 20-21 40.1351395021842 41.0 40.0 41.0 38.0 41.0 22-23 40.0642349025986 41.0 40.0 41.0 38.0 41.0 24-25 40.023569989383 41.0 40.0 41.0 38.0 41.0 26-27 39.96209583374477 41.0 40.0 41.0 38.0 41.0 28-29 39.93436881065911 41.0 40.0 41.0 38.0 41.0 30-31 39.880047462324335 41.0 40.0 41.0 38.0 41.0 32-33 39.83983505699804 41.0 40.0 41.0 38.0 41.0 34-35 39.76158587489891 41.0 40.0 41.0 37.0 41.0 36-37 39.65345444277877 41.0 40.0 41.0 37.0 41.0 38-39 39.54742274519277 41.0 40.0 41.0 37.0 41.0 40-41 39.418799519827516 41.0 39.0 41.0 36.0 41.0 42-43 39.32420904966815 41.0 39.0 41.0 35.5 41.0 44-45 39.09204883657733 41.0 39.0 41.0 35.0 41.0 46-47 38.87240052783066 40.5 38.5 41.0 35.0 41.0 48-49 38.768490598526355 40.0 38.0 41.0 35.0 41.0 50-51 38.60169390554704 40.0 38.0 41.0 35.0 41.0 52-53 38.347734971556065 40.0 37.0 41.0 35.0 41.0 54-55 38.15277996528461 40.0 36.5 41.0 35.0 41.0 56-57 37.920708295216315 40.0 36.0 41.0 34.5 41.0 58-59 37.65686028890323 39.0 35.0 41.0 34.0 41.0 60-61 37.41099753303634 39.0 35.0 41.0 34.0 41.0 62-63 37.20060666251562 39.0 35.0 41.0 34.0 41.0 64-65 36.940371374734475 38.0 35.0 41.0 33.0 41.0 66-67 36.67577258887557 37.0 35.0 40.0 33.0 41.0 68-69 36.42309732469502 37.0 35.0 40.0 33.0 41.0 70-71 36.15148731876222 36.0 35.0 39.5 33.0 41.0 72-73 35.86007305411407 36.0 35.0 39.0 33.0 41.0 74-75 35.556601841205236 35.0 35.0 39.0 32.5 41.0 76-77 33.69996890793403 34.5 32.5 36.5 29.5 39.0 78-79 35.011908424480964 35.0 35.0 37.0 32.5 39.0 80-81 34.92883670789698 35.0 35.0 37.0 33.0 39.0 82-83 34.708544524083294 35.0 35.0 36.0 33.0 38.5 84-85 34.48702457089277 35.0 35.0 36.0 33.0 37.0 86-87 34.27576907979726 35.0 35.0 36.0 32.0 37.0 88-89 34.123664408071534 35.0 35.0 35.0 32.0 36.5 90-91 33.97174865532935 35.0 35.0 35.0 32.0 36.0 92-93 33.86823043709242 35.0 35.0 35.0 32.0 36.0 94-95 33.76439150541908 35.0 34.0 35.0 32.0 36.0 96-97 33.70864081972069 35.0 34.0 35.0 31.0 36.0 98-99 33.678091028755674 35.0 34.0 35.0 31.0 35.0 100-101 32.850105231546124 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 7.0 14 12.0 15 65.0 16 146.0 17 304.0 18 517.0 19 811.0 20 1227.0 21 1829.0 22 2402.0 23 2662.0 24 2524.0 25 3122.0 26 4153.0 27 5705.0 28 7258.0 29 8299.0 30 9219.0 31 9789.0 32 12103.0 33 16343.0 34 27629.0 35 57093.0 36 161046.0 37 332827.0 38 400829.0 39 157451.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.383416375533855 20.063197888593635 13.871969342300853 23.681416393571656 2 15.366580354221055 20.702827582661236 39.26715755680015 24.663434506317568 3 18.59909433136961 27.832948286794522 29.104132306941526 24.46382507489434 4 12.68931681509524 17.54890063840743 39.9834175648139 29.778364981683424 5 13.363957522199001 38.6266283551481 34.71286354663361 13.296550576019287 6 28.477884237954683 38.004705429197 19.921037577332335 13.596372755515985 7 26.229952349980785 31.715212996973214 23.71908440802257 18.335750245023434 8 25.55955517944039 34.45955705638926 21.20519702658657 18.77569073758378 9 26.48505418261733 15.9613283248721 21.048349386686557 36.50526810582401 10-11 25.50136976463877 25.52993202996916 28.204094523144818 20.764603682247245 12-13 26.031485409170774 23.40285932757899 28.308714020726413 22.25694124252383 14-15 23.246827752402698 25.33256677653618 25.56800144933095 25.85260402173017 16-17 22.937090386512736 27.957846992760686 26.476118273892542 22.628944346834036 18-19 22.83153241449886 27.270883708328675 27.464087031670655 22.43349684550181 20-21 24.00503841033013 25.89729852581206 26.988913293887272 23.108749769970537 22-23 24.348333472746152 26.273740133142642 26.351879318822157 23.026047075289043 24-25 23.804442826820175 26.175359538302466 26.497175187348365 23.523022447528994 26-27 23.286998801988634 27.26328666420753 26.73511707541596 22.714597458387875 28-29 23.17272914231992 26.952745007148966 27.191247902643482 22.68327794788763 30-31 23.36668213123831 26.166259242529776 27.148810390886428 23.318248235345482 32-33 23.260556621880998 26.276775105435647 27.602310117905127 22.860358154778226 34-35 23.926918839515242 26.202023911535477 26.664789651936182 23.206267597013095 36-37 23.102074159188614 26.37812111339977 27.059184046536377 23.460620680875234 38-39 23.1279679253921 26.56404924787395 26.570944994789425 23.737037831944527 40-41 23.423016126255007 26.280589166087942 27.13117342762689 23.165221280030163 42-43 23.43652199743266 26.424094147755046 27.128602823747155 23.010781031065136 44-45 23.607278116722618 26.153125445047888 26.73327405482541 23.506322383404086 46-47 23.61047309064464 25.84168680769675 26.610333032391843 23.93750706926677 48-49 23.074487414735735 25.963832488086364 27.072221997802316 23.88945809937558 50-51 23.478794150121633 26.251578065159503 26.659202394660326 23.610425390058538 52-53 23.55331046991066 26.408640496820407 26.278314907264406 23.759734126004524 54-55 23.644006453439836 25.8650082055308 26.596283804461102 23.89470153656827 56-57 23.752072449107423 26.20485651898737 26.228116100404677 23.81495493150053 58-59 23.90922776493332 26.03705409041629 26.668895398200032 23.384822746450357 60-61 23.533373278194187 26.481646860219655 26.459361546159986 23.525618315426172 62-63 23.236871762773248 26.184171118979787 26.946375570939285 23.63258154730768 64-65 23.830722062228197 26.01063495547959 26.332980521351107 23.825662460941103 66-67 23.312480159426404 26.249211477460697 26.33395979901958 24.104348564093314 68-69 23.616994711084526 26.287770535656723 26.891658431213493 23.203576322045254 70-71 23.995893562310215 25.97268794582636 26.62864077075681 23.402777721106617 72-73 23.412366481610388 26.19135248854857 26.7929962061151 23.60328482372594 74-75 23.6625311226684 25.78025988397192 26.667893483968 23.889315509391682 76-77 23.319087540221854 25.367739766327645 26.60938427000035 24.70378842345015 78-79 23.480698604423406 25.296866073614627 26.64792295764303 24.57451236431894 80-81 22.96400788689359 26.339360038650998 26.59215032105794 24.10448175339747 82-83 22.9897917630651 26.335725238558066 26.80357896265902 23.870904035717814 84-85 23.43910475471544 25.563292495077988 27.03224555998735 23.965357190219223 86-87 23.050809005763863 26.60085376691396 26.639535234818545 23.708801992503627 88-89 23.478059691870282 25.691594451739157 26.16605448211309 24.66429137427748 90-91 23.393678599437077 25.923764865639026 26.24896665804358 24.433589876880315 92-93 23.436154768306984 25.897854810660743 26.729587977081636 23.936402443950637 94-95 23.48005905044341 25.580691255784878 26.54491253010259 24.394337163669125 96-97 23.5519951558398 26.176336897632023 26.615012489870598 23.656655456657578 98-99 22.375393037172564 26.382434043608864 27.08592263869632 24.156250280522247 100-101 23.16073090197465 25.823730510417104 26.576264100052548 24.439274487555696 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 4.0 3 6.5 4 6.0 5 4.5 6 6.5 7 16.5 8 35.0 9 46.5 10 40.5 11 35.5 12 43.5 13 50.0 14 54.5 15 68.0 16 76.5 17 76.5 18 91.5 19 102.5 20 109.5 21 139.5 22 188.0 23 250.0 24 316.0 25 433.0 26 632.0 27 854.0 28 1072.5 29 1573.0 30 2750.5 31 5088.0 32 9116.0 33 15177.0 34 23104.0 35 31843.5 36 43137.0 37 52188.5 38 52654.5 39 49391.5 40 45490.5 41 40790.5 42 36787.5 43 34542.0 44 34031.0 45 35015.5 46 36135.5 47 37632.0 48 40400.5 49 45462.5 50 50557.0 51 49786.5 52 47396.0 53 48836.5 54 52076.0 55 52000.0 56 43965.0 57 36565.5 58 34465.0 59 33346.5 60 27985.0 61 20436.0 62 16303.5 63 11567.0 64 6802.0 65 4293.5 66 3271.0 67 2769.0 68 2103.5 69 1303.0 70 774.5 71 504.0 72 357.0 73 268.5 74 211.5 75 148.0 76 94.0 77 56.0 78 33.5 79 16.0 80 10.5 81 8.0 82 4.5 83 1.5 84 2.0 85 2.0 86 0.5 87 0.5 88 0.5 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.46776829963938105 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 5.304420704214893E-4 22-23 0.0012649003217743205 24-25 1.6321294474507363E-4 26-27 0.0023665876988035674 28-29 0.0033458653672740093 30-31 9.384744322841733E-4 32-33 8.160647237253682E-5 34-35 0.003509078312019083 36-37 0.0023665876988035674 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008446269890557561 46-47 0.07364984131621448 48-49 9.384744322841733E-4 50-51 0.0 52-53 4.080323618626841E-5 54-55 0.0 56-57 0.007466992222087119 58-59 0.039252713211190206 60-61 0.030276001250211154 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 1.6321294474507363E-4 78-79 0.007589401930645924 80-81 0.00563084659370504 82-83 8.160647237253681E-4 84-85 0.0024889974073623727 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06499955524472557 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1225393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.1681048650614 #Duplication Level Percentage of deduplicated Percentage of total 1 67.27643986061902 27.023670912693415 2 16.32461120041636 13.114573891593603 3 6.4253245128643055 7.74279326474349 4 3.2036682017254687 5.147411211190852 5 1.858921580449397 3.733467848970853 6 1.1295153380916145 2.7222294328295553 7 0.7465828941438409 2.0992173987701586 8 0.513284393190796 1.6494129065029843 9 0.40255151555414664 1.4552758341331522 >10 1.825936348706298 12.813920692121183 >50 0.13490167842754183 3.799644841145737 >100 0.13710656841896124 11.499820431633355 >500 0.016070352730643007 4.215707222503617 >1k 0.005085554661595888 2.982854111168076 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2209 0.18026869747093383 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 2096 0.17104716609283716 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2062 0.1682725460321709 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1791 0.14615719201921343 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1758 0.14346417843091971 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1724 0.14068955837025346 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1547 0.12624521276031445 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1519 0.1239602315338834 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1487 0.12134882441796224 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1461 0.11922705613627628 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1454 0.11865581082966853 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1438 0.11735010727170793 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1385 0.11302496423596348 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1383 0.1128617512912184 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1366 0.11147444126088529 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1319 0.10763893705937606 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1273 0.10388503933023938 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1254 0.10233451635516116 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1235 0.10078399338008295 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 8.160647237253682E-5 0.0 12-13 0.0 0.0 0.0 8.160647237253682E-5 0.0 14-15 0.0 0.0 0.0 8.160647237253682E-5 0.0 16-17 0.0 0.0 0.0 2.4481941711761043E-4 0.0 18-19 0.0 0.0 0.0 2.8562265330387885E-4 0.0 20-21 0.0 0.0 0.0 4.4883559804895245E-4 0.0 22-23 0.0 0.0 0.0 7.344582513528312E-4 0.0 24-25 0.0 0.0 0.0 8.160647237253681E-4 0.0 26-27 0.0 0.0 0.0 0.0010608841408429786 0.0 28-29 0.0 0.0 0.0 0.001917752100754615 0.0 30-31 0.0 0.0 0.0 0.004814781869979672 0.0 32-33 0.0 0.0 0.0 0.01256739674537067 0.0 34-35 0.0 0.0 0.0 0.021870534595839868 0.0 36-37 0.0 0.0 0.0 0.03786540318085708 0.0 38-39 0.0 0.0 0.0 0.07005915653182285 0.0 40-41 0.0 0.0 0.0 0.11033195064766976 0.0 42-43 0.0 0.0 0.0 0.14783012470285042 0.0 44-45 0.0 0.0 0.0 0.189571835321403 0.0 46-47 0.0 0.0 0.0 0.24098391291610122 0.0 48-49 0.0 0.0 0.0 0.30210716072313126 0.0 50-51 0.0 0.0 0.0 0.36673948684218044 0.0 52-53 0.0 0.0 0.0 0.42953566733284754 0.0 54-55 0.0 0.0 0.0 0.49653458115070026 0.0 56-57 0.0 0.0 0.0 0.576916956437649 0.0 58-59 0.0 0.0 0.0 0.6651335530723612 0.0 60-61 0.0 0.0 0.0 0.7669376273571009 0.0 62-63 0.0 0.0 0.0 0.8733932705670753 0.0 64-65 0.0 0.0 0.0 0.9874383157076954 0.0 66-67 0.0 0.0 0.0 1.1160501161668135 0.0 68-69 0.0 0.0 0.0 1.264696305593389 0.0 70-71 0.0 0.0 0.0 1.4278276438660904 0.0 72-73 0.0 0.0 0.0 1.5996092682102803 0.0 74-75 0.0 0.0 0.0 1.771635711971588 0.0 76-77 0.0 0.0 0.0 1.9529652935833648 0.0 78-79 0.0 0.0 0.0 2.167182283561274 0.0 80-81 0.0 0.0 0.0 2.418815841121991 0.0 82-83 0.0 0.0 0.0 2.684771334584089 0.0 84-85 0.0 0.0 0.0 2.957214542599803 0.0 86-87 0.0 0.0 0.0 3.236063858696761 0.0 88-89 0.0 0.0 0.0 3.5473517475618026 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1080 0.0 53.862305 1 CCGTGCG 230 0.0 51.620346 9 GTATCAA 2155 0.0 47.3495 1 AAACCGT 295 0.0 41.856224 6 AACCGTG 335 0.0 36.858467 7 ATCAACG 2905 0.0 34.821075 3 ACCGTGC 360 0.0 34.298847 8 TCAACGC 3025 0.0 33.596737 4 AAATGCG 255 0.0 29.7981 6 CGCAGAG 3640 0.0 28.050835 8 TATCAAC 3695 0.0 28.018879 2 ACGCAGA 3680 0.0 27.874987 7 CAACGCA 3725 0.0 27.41075 5 GTACATG 5930 0.0 26.936365 1 AACGCAG 3850 0.0 26.644142 6 AATGCGG 270 0.0 26.383732 7 GCCCATA 950 0.0 25.597378 1 ATAACGC 130 1.0036985E-5 25.571926 4 TACATGG 6230 0.0 25.308056 2 GTCTAAT 705 0.0 25.024273 1 >>END_MODULE