##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224495_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 743470 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21678077124834 34.0 31.0 34.0 31.0 34.0 2 32.374278720055955 34.0 31.0 34.0 31.0 34.0 3 32.51643374984868 34.0 31.0 34.0 31.0 34.0 4 35.80409296945405 37.0 37.0 37.0 35.0 37.0 5 35.81334687344479 37.0 37.0 37.0 35.0 37.0 6 35.914869463461876 37.0 37.0 37.0 35.0 37.0 7 35.87756735308755 37.0 37.0 37.0 35.0 37.0 8 35.909568644329966 37.0 37.0 37.0 35.0 37.0 9 37.64600185616097 39.0 39.0 39.0 35.0 39.0 10-11 37.719192435471506 39.0 39.0 39.0 35.0 39.0 12-13 37.72148842589479 39.0 39.0 39.0 35.0 39.0 14-15 39.220121861003136 41.0 40.0 41.0 36.0 41.0 16-17 39.04915867486247 41.0 40.0 41.0 36.0 41.0 18-19 39.12570715698011 41.0 40.0 41.0 36.0 41.0 20-21 39.189852986670616 41.0 40.0 41.0 36.0 41.0 22-23 39.143678964854 41.0 40.0 41.0 36.0 41.0 24-25 39.083453266439804 41.0 40.0 41.0 36.0 41.0 26-27 38.9183928067037 41.0 39.0 41.0 35.0 41.0 28-29 38.83552261691797 41.0 39.0 41.0 35.0 41.0 30-31 38.76575517505751 41.0 39.0 41.0 35.0 41.0 32-33 38.567856134074006 41.0 39.0 41.0 35.0 41.0 34-35 38.56835043781189 40.5 39.0 41.0 35.0 41.0 36-37 38.553563694567366 40.0 39.0 41.0 35.0 41.0 38-39 38.434400850067924 40.0 38.0 41.0 34.5 41.0 40-41 38.337931591052765 40.0 38.0 41.0 34.0 41.0 42-43 38.1892739451491 40.0 38.0 41.0 33.5 41.0 44-45 38.01167162091275 40.0 38.0 41.0 33.0 41.0 46-47 37.828754354580546 40.0 37.5 41.0 33.0 41.0 48-49 37.616123044642016 40.0 37.0 41.0 33.0 41.0 50-51 36.3224723257159 38.5 35.5 40.0 30.5 40.5 52-53 36.64981371138042 39.0 35.5 40.0 31.5 40.5 54-55 37.090010356840224 39.0 35.5 41.0 32.0 41.0 56-57 36.91627167202442 39.0 35.0 41.0 32.0 41.0 58-59 36.7514775310369 39.0 35.0 41.0 32.0 41.0 60-61 36.47867163436319 38.5 35.0 41.0 31.0 41.0 62-63 36.16608269331647 37.5 35.0 41.0 31.0 41.0 64-65 35.8967819817881 37.0 35.0 40.0 31.0 41.0 66-67 35.626264005272574 36.5 35.0 40.0 30.0 41.0 68-69 35.29756076237105 36.0 35.0 39.0 30.0 41.0 70-71 34.98488035831977 35.5 35.0 39.0 29.5 41.0 72-73 34.65359395806152 35.0 34.5 38.5 29.0 40.5 74-75 34.36416936796374 35.0 34.0 37.0 29.0 40.0 76-77 34.04201447267543 35.0 34.0 37.0 29.0 39.0 78-79 33.80244865293825 35.0 34.0 36.5 29.0 39.0 80-81 33.521765504996836 35.0 34.0 36.0 29.0 38.0 82-83 33.2832770656516 35.0 34.0 36.0 28.0 37.0 84-85 33.07554238906748 35.0 34.0 35.0 27.5 37.0 86-87 32.879499509058874 35.0 34.0 35.0 27.0 36.0 88-89 32.74280804874441 35.0 33.5 35.0 27.0 36.0 90-91 32.58695643401886 35.0 33.0 35.0 27.0 36.0 92-93 32.4602862254025 35.0 33.0 35.0 26.5 35.5 94-95 32.33544258678897 35.0 33.0 35.0 26.0 35.0 96-97 32.213172690222876 35.0 33.0 35.0 25.0 35.0 98-99 32.16447872812622 35.0 33.0 35.0 25.0 35.0 100-101 30.949599849355053 34.0 31.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 3.0 7 121.0 8 425.0 9 309.0 10 349.0 11 731.0 12 1287.0 13 1421.0 14 1505.0 15 1527.0 16 1607.0 17 1759.0 18 2004.0 19 2321.0 20 2710.0 21 3291.0 22 3910.0 23 3993.0 24 3895.0 25 4139.0 26 4324.0 27 4668.0 28 5380.0 29 6095.0 30 7551.0 31 9372.0 32 12270.0 33 17220.0 34 27949.0 35 49669.0 36 107630.0 37 196769.0 38 206241.0 39 51016.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.16245364327176 18.160926043422094 12.773913875159797 24.90270643814635 2 16.35291269318197 19.261436238180423 38.290448841244434 26.095202227393173 3 20.200573258602578 24.8007650621613 27.872177589112663 27.12648409012346 4 12.962056303549572 16.06063459184634 37.558341291511425 33.41896781309266 5 14.187526060231079 38.08869221353922 33.863235907299554 13.86054581893015 6 31.798055066108923 35.92236404965903 18.39495877439574 13.88462210983631 7 28.418900560883426 30.457584031635438 21.63436318883075 19.489152218650382 8 26.676261315184203 34.13762492097865 20.059585457382276 19.12652830645487 9 27.045610448303226 15.097313946763153 19.2462372388933 38.610838366040326 10-11 26.58264623992898 24.436426486610085 27.422895342111985 21.558031931348946 12-13 26.92765007330491 22.056101792943895 27.38066095471236 23.63558717903883 14-15 23.85217348013816 23.995000060548243 24.52062609575503 27.632200363558567 16-17 24.14393460650368 26.52364194826425 25.611802163945413 23.720621281286657 18-19 24.055111807116745 26.13519102260359 26.28055843689332 23.52913873338634 20-21 25.166227228904802 24.688082165330414 25.95687881003977 24.18881179572502 22-23 24.955232197017363 25.47447814638079 25.303549593842806 24.266740062759045 24-25 24.23583855464638 25.339561914178766 25.88257847103811 24.542021060136747 26-27 24.240251792271376 26.041736721051283 25.920144726754273 23.797866759923064 28-29 23.961356880573526 26.22708380970315 25.970651135889817 23.840908173833512 30-31 24.17152003443313 25.51878354203936 25.94738187149448 24.362314552033034 32-33 23.967745840450856 25.710048825103904 26.03339744710614 24.288807887339097 34-35 24.657820759411948 25.243116736384792 25.748248079949427 24.350814424253837 36-37 24.013332257066367 25.328395958617534 26.435874668711573 24.222397115604526 38-39 24.117531536427297 25.688030819476314 25.640211668679868 24.554225975416518 40-41 24.64403052079725 25.332732512585288 26.02694950079194 23.996287465825517 42-43 24.432810946846246 25.45036835174532 26.104685337354244 24.012135364054195 44-45 24.612147879508576 25.237325276537586 25.736189262956543 24.414337580997298 46-47 24.353302755995536 25.256768934859508 25.635466125062205 24.754462184082747 48-49 23.943131531870822 25.584892463717434 25.99008702435875 24.481888980052997 50-51 24.15006657968714 25.75571307517452 25.7278706605512 24.36634968458714 52-53 24.464605162279582 25.74629776588161 25.101349079317252 24.687747992521555 54-55 24.379665622015683 25.144928510901583 25.641249815056426 24.83415605202631 56-57 24.243159941329136 25.56930714709884 25.506224532411885 24.681308379160143 58-59 24.5770543937107 25.644709547754918 25.77741814845606 24.00081791007832 60-61 24.50192543763768 25.825684833605195 25.400104259505273 24.27228546925185 62-63 24.096060533285435 25.513194902729257 25.942990378205216 24.447754185780088 64-65 24.85372955981613 25.053287115283172 25.31797336720743 24.775009957693257 66-67 24.024801704747247 25.51685913234392 25.2040127210306 25.254326441878234 68-69 24.11939957227595 25.5875152998776 26.1941974793872 24.098887648459254 70-71 24.530377822911483 25.0786178325958 25.901179603749984 24.489824740742733 72-73 24.35827941947893 25.384615384615383 25.9353437260414 24.321761469864285 74-75 24.438107791840963 25.378562685784228 25.79519012199551 24.388139400379302 76-77 24.394259351419695 24.86798391327155 25.47520411045503 25.26255262485373 78-79 24.418474817279147 24.616027238961077 25.962841041936002 25.002656901823777 80-81 24.274152089596832 25.455278294408814 25.485692983896364 24.784876632097994 82-83 24.016105384767037 25.753341887524716 25.77298916506472 24.45756356264353 84-85 24.24415902074842 25.10072161681992 26.05489454249951 24.60022481993215 86-87 24.22176226049953 25.9854896730668 25.50955041134126 24.28319765509241 88-89 24.394521513734897 25.342270844531573 25.281993771817646 24.981213869915887 90-91 24.2101900547433 25.190256499926022 25.53183047063096 25.06772297469972 92-93 24.104494124340825 25.270479394335986 26.060581196949084 24.564445284374102 94-95 24.43649373881932 25.086755349913243 25.96096681775996 24.515784093507474 96-97 24.630650866880977 25.52907313005232 25.752619473549704 24.087656529516995 98-99 23.773982331357 25.80172005638471 25.751213239645764 24.67308437261253 100-101 24.401360168904233 25.179003233563392 25.42902240887689 24.99061418865548 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 1.5 2 2.5 3 3.5 4 2.0 5 3.0 6 5.0 7 12.5 8 26.0 9 27.0 10 30.0 11 34.5 12 34.5 13 36.0 14 47.0 15 57.5 16 55.5 17 60.5 18 87.0 19 102.5 20 112.0 21 140.0 22 178.0 23 220.5 24 278.0 25 370.5 26 506.5 27 738.5 28 1047.5 29 1499.5 30 2312.5 31 3629.5 32 5518.5 33 7507.5 34 9365.5 35 11296.0 36 13543.0 37 15285.0 38 16461.0 39 17718.0 40 18351.0 41 18930.5 42 19986.5 43 21197.5 44 22724.5 45 24830.5 46 27166.0 47 28267.5 48 29634.5 49 32419.5 50 34708.5 51 34597.0 52 33972.0 53 34493.0 54 35458.5 55 35468.5 56 31076.0 57 26682.0 58 24878.0 59 22998.0 60 19420.5 61 15234.5 62 12317.0 63 8806.0 64 5617.0 65 3864.0 66 2902.0 67 2421.5 68 1924.0 69 1364.5 70 927.5 71 649.0 72 508.0 73 370.5 74 267.0 75 195.0 76 139.0 77 90.5 78 64.5 79 49.0 80 27.0 81 16.0 82 12.0 83 8.5 84 8.0 85 11.0 86 9.5 87 5.5 88 7.0 89 7.5 90 5.5 91 6.0 92 4.5 93 4.0 94 2.0 95 0.5 96 2.5 97 3.5 98 2.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15185548845279567 2 0.0 3 1.3450441847014674E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0351056532207083 16-17 0.07014405423218154 18-19 0.02434529974309656 20-21 0.038401011473226894 22-23 0.0631498244717339 24-25 0.016476791262592976 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.02152070695522348 38-39 0.005918194412686457 40-41 0.005716437784981237 42-43 0.0030936016248133747 44-45 0.010894857896081887 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 6.725220923507337E-5 58-59 0.015064494868656436 60-61 0.017821835447294446 62-63 0.02817867566949574 64-65 0.04384844042126784 66-67 0.018023592074999664 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01654404347182805 80-81 0.05487780273581987 82-83 0.049026860532368495 84-85 0.028044171251025596 86-87 0.0555503248281706 88-89 0.03167579054971956 90-91 0.0 92-93 0.002891844997108155 94-95 0.0 96-97 0.0 98-99 8.070265108208806E-4 100-101 0.043982944839737984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 743470.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.76129107981075 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74789898356634 48.45585303143819 2 12.874240580562759 15.645109586941713 3 3.6331601778632807 6.622665093201835 4 1.4454365384445025 3.513063609992819 5 0.6978194919287177 2.120020663512323 6 0.37977702067349434 1.3845445259139297 7 0.2364011847448309 1.0054828838524952 8 0.14993718217214655 0.7288301415718728 9 0.11121226237778246 0.6081660581382655 >10 0.5881579233170494 6.724302789332171 >50 0.06228680000408953 2.698744487797106 >100 0.06876039738957981 8.092511860173419 >500 0.004241712825165879 1.7932717620482246 >1k 6.697441302893493E-4 0.6074335060856241 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1735 0.23336516604570462 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1534 0.20632977793320512 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1209 0.1626158419304074 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 944 0.1269721710358185 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 868 0.11674983523208737 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 857 0.11527028662891577 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 831 0.11177317174869196 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 811 0.10908308337928901 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 784 0.10545146408059505 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 775 0.10424092431436371 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 0.0 0.0 22-23 0.0 0.0 0.0 1.3450441847014674E-4 0.0 24-25 0.0 0.0 0.0 5.38017673880587E-4 1.3450441847014674E-4 26-27 0.0 0.0 0.0 6.052698831156603E-4 1.3450441847014674E-4 28-29 0.0 0.0 0.0 0.001479548603171614 1.3450441847014674E-4 30-31 0.0 0.0 0.0 0.004236889181809623 1.3450441847014674E-4 32-33 0.0 0.0 0.0 0.014459224985540774 1.3450441847014674E-4 34-35 0.0 0.0 0.0 0.02407629090615627 1.3450441847014674E-4 36-37 0.0 0.0 0.0 0.041965378562685784 1.3450441847014674E-4 38-39 0.0 0.0 0.0 0.06940427993059572 1.3450441847014674E-4 40-41 0.0 0.0 0.0 0.10457718536053909 1.3450441847014674E-4 42-43 0.0 0.0 0.0 0.13625297591025864 2.690088369402935E-4 44-45 0.0 0.0 0.0 0.1722329078510229 2.690088369402935E-4 46-47 0.0 0.0 0.0 0.21211346792742142 2.690088369402935E-4 48-49 0.0 0.0 0.0 0.2556256473025139 3.3626104617536683E-4 50-51 0.0 0.0 0.0 0.3001466098161325 4.0351325541044023E-4 52-53 0.0 0.0 0.0 0.34816468720997484 4.7076546464551363E-4 54-55 0.0 0.0 0.0 0.3990746096009254 5.38017673880587E-4 56-57 0.0 0.0 0.0 0.45805479710008473 5.38017673880587E-4 58-59 0.0 0.0 0.0 0.5247689886612775 5.38017673880587E-4 60-61 0.0 0.0 0.0 0.5953165561488695 5.38017673880587E-4 62-63 0.0 0.0 0.0 0.6674781766581033 5.38017673880587E-4 64-65 0.0 0.0 0.0 0.7419936244905645 6.052698831156603E-4 66-67 0.0 0.0 0.0 0.8294214964961599 6.725220923507338E-4 68-69 0.0 1.3450441847014674E-4 0.0 0.9305688191857102 6.725220923507338E-4 70-71 0.0 1.3450441847014674E-4 0.0 1.0354150133831896 6.725220923507338E-4 72-73 0.0 1.3450441847014674E-4 0.0 1.1566034944247918 7.397743015858071E-4 74-75 0.0 1.3450441847014674E-4 0.0 1.2908389040579982 8.070265108208805E-4 76-77 0.0 1.3450441847014674E-4 0.0 1.4246708004357944 8.070265108208805E-4 78-79 0.0 1.3450441847014674E-4 0.0 1.5784766029564072 8.070265108208805E-4 80-81 0.0 1.3450441847014674E-4 0.0 1.745127577440919 8.070265108208805E-4 82-83 0.0 1.3450441847014674E-4 0.0 1.930340161674311 8.070265108208805E-4 84-85 0.0 1.3450441847014674E-4 0.0 2.1196551306710427 8.070265108208805E-4 86-87 0.0 1.3450441847014674E-4 0.0 2.3219497760501433 8.070265108208805E-4 88-89 0.0 1.3450441847014674E-4 0.0 2.54791719907999 8.070265108208805E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1135 0.0 49.832153 1 GGTATCA 565 0.0 49.63204 1 ATCAACG 1500 0.0 37.34672 3 TCAACGC 1600 0.0 35.01255 4 GTCTAAT 340 0.0 33.549873 1 CCGATCG 60 0.0039408794 31.68172 9 CGCAGAG 1725 0.0 31.649763 8 TATCAAC 1780 0.0 31.205244 2 GTTATTA 355 0.0 30.75822 8 ACGCAGA 1830 0.0 29.833794 7 CAACGCA 2015 0.0 27.565922 5 GTACATG 2695 0.0 27.15942 1 AACGCAG 2045 0.0 26.92938 6 TACATGG 2680 0.0 26.748774 2 TCTAATG 415 0.0 26.311249 2 GGCCGAT 110 9.50666E-5 25.895262 7 AAACCGT 165 8.445386E-8 25.895262 6 TATACCG 110 9.50666E-5 25.895262 5 GCCCATA 560 0.0 25.461956 1 ACCGTGC 210 1.2714736E-9 24.86767 8 >>END_MODULE