##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224490_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 844047 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18409401372198 34.0 31.0 34.0 31.0 34.0 2 32.35466745335272 34.0 31.0 34.0 31.0 34.0 3 32.49337536890718 34.0 31.0 34.0 31.0 34.0 4 35.79043347112187 37.0 37.0 37.0 35.0 37.0 5 35.806812890751345 37.0 37.0 37.0 35.0 37.0 6 35.90922661889682 37.0 37.0 37.0 35.0 37.0 7 35.87040769056699 37.0 37.0 37.0 35.0 37.0 8 35.90430390724687 37.0 37.0 37.0 35.0 37.0 9 37.629538402482325 39.0 39.0 39.0 35.0 39.0 10-11 37.698865702976256 39.0 39.0 39.0 35.0 39.0 12-13 37.68643393081191 39.0 39.0 39.0 35.0 39.0 14-15 39.165816003137266 41.0 40.0 41.0 36.0 41.0 16-17 39.00393461501552 41.0 39.5 41.0 36.0 41.0 18-19 39.08969168778516 41.0 40.0 41.0 36.0 41.0 20-21 39.14847277462037 41.0 40.0 41.0 36.0 41.0 22-23 39.10472521079987 41.0 40.0 41.0 36.0 41.0 24-25 39.0409082669567 41.0 39.5 41.0 35.5 41.0 26-27 38.86524447098326 41.0 39.0 41.0 35.0 41.0 28-29 38.78633595048617 41.0 39.0 41.0 35.0 41.0 30-31 38.70546367678577 41.0 39.0 41.0 35.0 41.0 32-33 38.50387893091262 40.5 39.0 41.0 35.0 41.0 34-35 38.4911882869082 40.0 38.0 41.0 35.0 41.0 36-37 38.478289123709935 40.0 38.0 41.0 35.0 41.0 38-39 38.349271426828125 40.0 38.0 41.0 34.0 41.0 40-41 38.23520609634298 40.0 38.0 41.0 34.0 41.0 42-43 38.063732825304754 40.0 38.0 41.0 33.5 41.0 44-45 37.85811631342804 40.0 37.5 41.0 33.0 41.0 46-47 37.653591565398614 40.0 37.0 41.0 33.0 41.0 48-49 37.41198535152663 40.0 36.5 41.0 32.0 41.0 50-51 36.104758976692054 38.5 35.0 40.0 30.0 40.5 52-53 36.41417480306191 39.0 35.0 40.0 30.5 40.5 54-55 36.84491799627272 39.0 35.0 41.0 31.0 41.0 56-57 36.6715852316281 39.0 35.0 41.0 31.0 41.0 58-59 36.50888042964432 39.0 35.0 41.0 31.0 41.0 60-61 36.25248890168439 38.0 35.0 41.0 31.0 41.0 62-63 35.97681467975124 37.0 35.0 41.0 30.5 41.0 64-65 35.74259075620196 37.0 35.0 40.0 30.0 41.0 66-67 35.51872881486457 36.0 35.0 40.0 30.0 41.0 68-69 35.23429737917438 36.0 35.0 40.0 29.0 41.0 70-71 34.963195769903805 35.0 35.0 39.0 29.0 41.0 72-73 34.6621207112874 35.0 34.0 39.0 29.0 41.0 74-75 34.39985628762379 35.0 34.0 38.5 29.0 40.5 76-77 34.08004234361357 35.0 34.0 37.0 28.0 39.5 78-79 33.85880229418504 35.0 34.0 37.0 28.5 39.0 80-81 33.56378850940765 35.0 34.0 36.5 28.0 39.0 82-83 33.30884358335496 35.0 34.0 36.0 27.0 37.5 84-85 33.07334544166379 35.0 34.0 36.0 27.0 37.0 86-87 32.849297491727356 35.0 33.5 35.0 27.0 37.0 88-89 32.692868406617166 35.0 33.0 35.0 27.0 36.0 90-91 32.5139737479074 35.0 33.0 35.0 26.0 36.0 92-93 32.3809764148205 35.0 33.0 35.0 25.5 36.0 94-95 32.238859328923624 35.0 33.0 35.0 25.0 35.5 96-97 32.10351615490606 35.0 33.0 35.0 25.0 35.0 98-99 32.05678475250786 35.0 33.0 35.0 25.0 35.0 100-101 30.817132813694023 34.0 31.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 87.0 8 321.0 9 303.0 10 436.0 11 886.0 12 1429.0 13 1723.0 14 1816.0 15 1866.0 16 2009.0 17 2159.0 18 2479.0 19 2851.0 20 3444.0 21 4546.0 22 5461.0 23 5022.0 24 4970.0 25 4953.0 26 5043.0 27 5314.0 28 5949.0 29 6946.0 30 8248.0 31 10456.0 32 13942.0 33 20187.0 34 33221.0 35 60076.0 36 128768.0 37 201785.0 38 223874.0 39 73462.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.01330172527328 19.591776683835157 14.05870508991805 23.336216500973514 2 15.911355437210101 19.890408686740635 38.87280891421666 25.325426961832605 3 19.899104666468414 26.910714264557612 28.285881169561268 24.904299899412706 4 12.818125057016966 16.839939008135804 39.18703579303048 31.15490014181675 5 13.513465482372428 39.68013629572761 33.594930140146225 13.211468081753742 6 29.04767151592269 37.366639535476104 19.69475633465909 13.890932613942114 7 26.730501974416114 31.61127283196315 22.324941620549566 19.333283573071167 8 26.090371744701418 34.21195739099837 20.590678007267368 19.106992857032843 9 26.934045142035927 15.451746170533157 20.436421194554335 37.17778749287658 10-11 26.088713069295906 25.28668427232133 27.32513710729379 21.299465551088982 12-13 26.469912220528002 22.90500410522163 27.714214966702087 22.910868707548275 14-15 23.631798339964703 24.64048964285418 25.12637531304928 26.601336704131835 16-17 23.256537761083603 27.47015679244209 26.167584371976556 23.10572107449775 18-19 23.084553176965812 26.984892584235574 27.04076916513396 22.88978507366465 20-21 24.88858466972466 24.978724412995295 26.55874788133082 23.573943035949224 22-23 24.527861212329228 26.31688768672 25.846512435749467 23.3087386652013 24-25 23.520388484119184 25.921811409114042 26.544222596281173 24.013577510485597 26-27 23.387441694597573 26.8344653792976 26.822499221014944 22.955593705089882 28-29 23.060682639710823 27.106606622616987 26.85265157035094 22.98005916732125 30-31 23.372869046391965 25.973375890205162 27.017215865941115 23.636539197461754 32-33 23.259249781114086 26.086995155483052 27.159684235593517 23.494070827809352 34-35 24.016375865325035 25.699812925109622 26.604324166782185 23.679487042783162 36-37 22.941454954615992 25.90985768281143 27.423447999625527 23.725239362947047 38-39 23.122839901848458 26.20992155222565 26.54830977688415 24.11892876904174 40-41 24.007279672604305 25.586793271042215 26.99497863728889 23.41094841906459 42-43 23.832165197388413 26.125151583189034 26.98497704703211 23.057706172390443 44-45 23.944789325193646 25.750564915852124 26.385332450164768 23.919313308789462 46-47 23.643884759971897 25.733697294108033 26.282718853333996 24.339699092586077 48-49 23.223469783080798 25.934219302953508 26.811066208398348 24.031244705567346 50-51 23.282885905642694 26.342253452710573 26.384490437143903 23.99037020450283 52-53 23.64228532297372 26.335144843829788 25.613206373578723 24.40936345961777 54-55 23.732268463722992 25.53347147729925 26.13219406028337 24.602065998694385 56-57 23.612990287259226 26.220431113944027 26.040997765524626 24.12558083327212 58-59 24.07896210266993 26.31122107694231 26.30843638186346 23.3013804385243 60-61 23.797490554176694 26.43485566568688 25.91944580553306 23.84820797460337 62-63 23.412200839557322 25.98301923017666 26.485995131420825 24.118784798845194 64-65 24.449081773321936 25.2769259764567 25.861419070050268 24.412573180171094 66-67 23.281843696731155 25.916542588709568 25.725641270234384 25.07597244432489 68-69 23.467413544506407 26.118095319336483 26.8987982896687 23.515692846488406 70-71 23.941616995262113 25.63802726625413 26.48039741862716 23.939958319856597 72-73 23.787834089807795 25.892219272149536 26.59917042534361 23.720776212699054 74-75 23.77106962053061 25.6142134265035 26.55213512991575 24.062581823050138 76-77 23.565512347061244 25.226735004093374 25.921542283782774 25.28621036506261 78-79 23.640685610277636 24.80967613689217 26.678816742219517 24.87082151061068 80-81 23.27331634933299 25.983920126988792 26.20803543167536 24.534728092002858 82-83 23.394617212828127 26.25599355156084 26.36824854939753 23.981140686213497 84-85 23.393399977482414 25.134424053520743 27.07668422643209 24.395491742564754 86-87 23.36545597234505 26.468517126673607 26.211860046613193 23.95416685436815 88-89 23.69914074074074 25.588385185185185 25.92705185185185 24.785422222222223 90-91 23.202617863697164 25.49686214156321 26.30718431556536 24.993335679174265 92-93 23.066287050761186 25.61287708335555 26.78697315556314 24.533862710320125 94-95 23.668824129461985 25.336622249708846 26.621029397652023 24.373524223177146 96-97 23.82965640538975 26.00880045779441 26.565108341123185 23.596434795692655 98-99 22.761835931946354 26.158179707122887 26.593941045448084 24.48604331548268 100-101 23.604614017838042 25.44821794436414 26.100564632224515 24.846603405573305 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 1.5 2 2.0 3 3.5 4 5.5 5 5.0 6 7.5 7 15.5 8 27.0 9 32.5 10 33.0 11 44.5 12 55.5 13 59.0 14 69.0 15 81.0 16 83.5 17 93.0 18 106.5 19 128.0 20 155.0 21 169.5 22 191.0 23 244.5 24 334.5 25 451.5 26 624.0 27 827.0 28 1068.5 29 1463.5 30 2135.5 31 3629.0 32 6356.5 33 10504.0 34 16077.0 35 21756.5 36 26228.5 37 28503.0 38 28742.0 39 27649.0 40 25863.0 41 23975.5 42 22569.0 43 22183.0 44 22773.5 45 24897.5 46 27705.5 47 28321.0 48 29398.5 49 33117.5 50 36814.0 51 36990.0 52 36066.5 53 36828.5 54 38667.0 55 39191.0 56 32712.0 57 26773.5 58 24868.0 59 23349.5 60 19797.5 61 14829.0 62 11893.5 63 8466.5 64 5090.5 65 3299.0 66 2661.0 67 2440.5 68 1826.0 69 1033.5 70 542.0 71 313.5 72 200.0 73 143.5 74 121.5 75 90.5 76 53.5 77 38.0 78 25.0 79 21.0 80 20.5 81 15.0 82 11.0 83 9.0 84 9.0 85 9.0 86 9.5 87 10.0 88 6.5 89 1.5 90 1.5 91 3.0 92 4.5 93 5.5 94 3.0 95 3.5 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1450156211680155 2 2.3695362935950248E-4 3 4.7390725871900496E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03909734884431791 16-17 0.07570668458036105 18-19 0.026420329673584528 20-21 0.042296222840671194 22-23 0.06770949958947783 24-25 0.017949237423982314 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.022806786825852115 38-39 0.005449933475268558 40-41 0.006279271178026817 42-43 0.004561357365170423 44-45 0.013743310502851144 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 1.1847681467975124E-4 58-59 0.01759380697994306 60-61 0.018423144682701318 62-63 0.031870263148853085 64-65 0.04857549401869801 66-67 0.018423144682701318 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01854162149738107 80-81 0.060186221857313635 82-83 0.05118198394165254 84-85 0.031040925446094828 86-87 0.06030469867199338 88-89 0.03518761395988612 90-91 0.0 92-93 0.004265165328471045 94-95 0.0 96-97 0.0 98-99 8.293377027582588E-4 100-101 0.04744996427924038 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 844047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.479081790689406 #Duplication Level Percentage of deduplicated Percentage of total 1 72.31676876463136 33.612170102496734 2 15.057731298706742 13.997390492296288 3 5.474278419126892 7.633183031628141 4 2.5191466174007835 4.683504866916382 5 1.3389172820488604 3.1115822931658266 6 0.7974065158194654 2.2237633601520956 7 0.5198165258795363 1.6912416375754888 8 0.34777945970384705 1.29315759621575 9 0.2556029526127383 1.0692171486386253 >10 1.1349077935842113 9.607084781958077 >50 0.10633524726372204 3.478080080436303 >100 0.11637592881725999 11.363784025517798 >500 0.010556223630804515 3.21957924821236 >1k 0.004376970773748213 3.016261334790088 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2616 0.30993534720222926 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2589 0.306736473205876 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2408 0.285292169748841 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 2021 0.2394416424677773 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1627 0.19276177748395526 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1477 0.17499025528199258 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1296 0.15354595182495762 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1273 0.15082098508732333 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1215 0.14394932983589778 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1168 0.13838091954594944 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1156 0.13695919776979246 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1140 0.1350635687349164 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1132 0.13411575421747843 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1033 0.12238654956418303 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1029 0.12191264230546404 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1021 0.12096482778802603 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1004 0.11895072193847026 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 953 0.11290840438980293 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 908 0.10757694772921413 No Hit CCGGTAAATGCGGGAGCTCCGCGCGCAGTTGCGGCATCGCATTGCCCATA 856 0.10141615336586707 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 1.1847681467975124E-4 0.0 0.0 5.923840733987562E-5 0.0 18-19 1.1847681467975124E-4 0.0 0.0 1.1847681467975124E-4 0.0 20-21 1.1847681467975124E-4 0.0 0.0 2.3695362935950248E-4 0.0 22-23 1.7771522201962686E-4 0.0 0.0 7.700992954183831E-4 0.0 24-25 3.554304440392537E-4 0.0 0.0 0.0013624833688171394 0.0 26-27 3.554304440392537E-4 1.1847681467975124E-4 0.0 0.0019548674422158957 0.0 28-29 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.002606489922954527 0.0 30-31 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.005449933475268558 0.0 32-33 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.014098740946890398 0.0 34-35 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.024524700638708506 0.0 36-37 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.041289169915893306 0.0 38-39 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.0736333403234654 0.0 40-41 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.1139746957219207 0.0 42-43 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.14934002490382645 0.0 44-45 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.19625684351700795 0.0 46-47 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.25040074782565425 0.0 48-49 4.7390725871900496E-4 1.1847681467975124E-4 0.0 0.306736473205876 0.0 50-51 5.331456660588806E-4 1.1847681467975124E-4 0.0 0.36585640373107187 0.0 52-53 5.923840733987562E-4 1.1847681467975124E-4 0.0 0.42361385088745057 0.0 54-55 6.516224807386318E-4 1.1847681467975124E-4 0.0 0.4869989467411175 0.0 56-57 7.700992954183831E-4 1.1847681467975124E-4 0.0 0.5656083132811325 0.0 58-59 8.293377027582587E-4 1.1847681467975124E-4 0.0 0.653458871366168 0.0 60-61 8.293377027582587E-4 1.1847681467975124E-4 0.0 0.7484772767393284 0.0 62-63 8.885761100981342E-4 1.1847681467975124E-4 0.0 0.8567650853566211 0.0 64-65 9.478145174380099E-4 1.1847681467975124E-4 0.0 0.9645197483078549 0.0 66-67 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.0846552383931227 0.0 68-69 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.2309741045226155 0.0 70-71 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.3846977715695927 0.0 72-73 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.5554820999304542 0.0 74-75 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.7211719252600863 0.0 76-77 9.478145174380099E-4 1.1847681467975124E-4 0.0 1.898887147279713 0.0 78-79 9.478145174380099E-4 1.1847681467975124E-4 0.0 2.1039705134903626 0.0 80-81 9.478145174380099E-4 1.1847681467975124E-4 0.0 2.3320976201562233 0.0 82-83 9.478145174380099E-4 1.1847681467975124E-4 0.0 2.5883037319011857 0.0 84-85 9.478145174380099E-4 1.1847681467975124E-4 0.0 2.8497820618993965 0.0 86-87 9.478145174380099E-4 1.1847681467975124E-4 0.0 3.120975490701347 0.0 88-89 9.478145174380099E-4 1.1847681467975124E-4 0.0 3.429785308164119 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 210 0.0 54.298584 9 AAACCGT 225 0.0 52.759014 6 AACCGTG 235 0.0 52.53451 7 ACCGTGC 270 0.0 51.003403 8 GGTATCA 915 0.0 47.819073 1 GTATCAA 1675 0.0 45.713608 1 TTGTACG 80 1.0798969E-5 35.612335 4 ATCAACG 2235 0.0 34.204838 3 TCAACGC 2385 0.0 32.053593 4 GTCTAAT 505 0.0 30.136515 1 TATCAAC 2610 0.0 29.108423 2 CGCAGAG 2665 0.0 28.68756 8 GTACATG 4525 0.0 28.482964 1 CATGGGA 2230 0.0 27.893671 4 TACATGG 4590 0.0 27.827793 2 TGCGCGG 205 0.0 27.818066 12-13 ACGCAGA 2790 0.0 27.40065 7 ACATGGG 4600 0.0 27.251179 3 TATGCGC 105 6.920426E-5 27.13321 4 GCCCATA 1300 0.0 26.706312 1 >>END_MODULE