##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224490_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 844047 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.17079380650603 34.0 33.0 34.0 31.0 34.0 2 33.2934635156573 34.0 33.0 34.0 31.0 34.0 3 33.412376325015074 34.0 34.0 34.0 31.0 34.0 4 36.62362522466166 37.0 37.0 37.0 35.0 37.0 5 36.66107337624564 37.0 37.0 37.0 35.0 37.0 6 36.70511831687098 37.0 37.0 37.0 36.0 37.0 7 36.68392755379736 37.0 37.0 37.0 36.0 37.0 8 36.67249928025335 37.0 37.0 37.0 36.0 37.0 9 38.51913696749115 39.0 39.0 39.0 37.0 39.0 10-11 38.545169877980726 39.0 39.0 39.0 37.5 39.0 12-13 38.5335816607369 39.0 39.0 39.0 37.0 39.0 14-15 40.135907123655436 41.0 40.0 41.0 38.0 41.0 16-17 40.14667962803019 41.0 40.0 41.0 38.0 41.0 18-19 40.140705434649966 41.0 40.0 41.0 38.0 41.0 20-21 40.1432923758985 41.0 40.0 41.0 38.0 41.0 22-23 40.07193082849652 41.0 40.0 41.0 38.0 41.0 24-25 40.03407985574263 41.0 40.0 41.0 38.0 41.0 26-27 39.969942432115744 41.0 40.0 41.0 38.0 41.0 28-29 39.94246706640744 41.0 40.0 41.0 38.0 41.0 30-31 39.87402597248732 41.0 40.0 41.0 38.0 41.0 32-33 39.82256675279931 41.0 40.0 41.0 38.0 41.0 34-35 39.73384420535823 41.0 40.0 41.0 37.0 41.0 36-37 39.612941577897914 41.0 40.0 41.0 37.0 41.0 38-39 39.49524197112246 41.0 40.0 41.0 36.0 41.0 40-41 39.35361360208614 41.0 39.0 41.0 36.0 41.0 42-43 39.24093563510089 41.0 39.0 41.0 35.0 41.0 44-45 38.973973605735225 41.0 39.0 41.0 35.0 41.0 46-47 38.73316533321012 40.5 38.0 41.0 35.0 41.0 48-49 38.60304284003142 40.0 38.0 41.0 35.0 41.0 50-51 38.407717224277796 40.0 37.0 41.0 35.0 41.0 52-53 38.13426503500398 40.0 37.0 41.0 35.0 41.0 54-55 37.932815945083625 40.0 36.0 41.0 34.5 41.0 56-57 37.68454777992221 39.0 35.5 41.0 34.0 41.0 58-59 37.402708616937204 39.0 35.0 41.0 34.0 41.0 60-61 37.153226064425326 39.0 35.0 41.0 34.0 41.0 62-63 36.949394998145834 38.0 35.0 41.0 33.0 41.0 64-65 36.6999959717883 37.0 35.0 41.0 33.0 41.0 66-67 36.445438464919604 37.0 35.0 40.0 33.0 41.0 68-69 36.19564135646475 36.0 35.0 40.0 33.0 41.0 70-71 35.92813907282414 36.0 35.0 39.0 33.0 41.0 72-73 35.644187468233405 35.0 35.0 39.0 32.5 41.0 74-75 35.34756832261711 35.0 35.0 39.0 32.0 40.5 76-77 33.52401110364707 34.5 32.5 36.5 29.0 39.0 78-79 34.8150043777183 35.0 34.5 37.0 32.0 39.0 80-81 34.73236383755881 35.0 35.0 37.0 33.0 39.0 82-83 34.52759206537077 35.0 35.0 36.0 32.0 38.0 84-85 34.31745033155737 35.0 35.0 36.0 32.0 37.0 86-87 34.120225532464424 35.0 35.0 35.5 32.0 37.0 88-89 33.97071430856339 35.0 35.0 35.0 32.0 36.5 90-91 33.823059023964305 35.0 34.5 35.0 32.0 36.0 92-93 33.72586005281696 35.0 34.5 35.0 31.5 36.0 94-95 33.62553447853023 35.0 34.0 35.0 31.0 36.0 96-97 33.5792130059108 35.0 34.0 35.0 31.0 35.5 98-99 33.5497022085263 35.0 34.0 35.0 31.0 35.0 100-101 32.709903003031826 34.5 33.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 11.0 15 48.0 16 126.0 17 272.0 18 483.0 19 752.0 20 1144.0 21 1806.0 22 2502.0 23 2358.0 24 2124.0 25 2384.0 26 3103.0 27 4128.0 28 5242.0 29 5962.0 30 6403.0 31 6936.0 32 8381.0 33 11256.0 34 19000.0 35 40599.0 36 117821.0 37 235200.0 38 265061.0 39 100924.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.80473508723688 19.394121197187374 13.908857486706449 22.892286228869295 2 15.78371820526582 20.015946979255894 39.459650943608594 24.740683871869695 3 19.650327529154183 27.350017238376534 28.447823403199113 24.55183182927017 4 12.95472882434272 17.019075951931587 39.509766636218124 30.516428587507566 5 13.42188290462498 38.763955087809094 34.356736058537024 13.457425949028906 6 28.959287812171596 36.83752208111633 20.211078293033445 13.992111813678623 7 26.859049318343647 31.459385555543705 22.53203909260977 19.149526033502873 8 26.299957229869904 33.69409523403318 20.45075688913058 19.55519064696634 9 27.222773139410485 15.743436088274704 20.47480768251057 36.558983089804244 10-11 26.264769615910016 25.223476891689682 27.498587163984944 21.013166328415362 12-13 26.822499221014944 23.20907485009721 27.58495676188648 22.383469167001362 14-15 23.880246005258 25.00032581124037 25.29438526527551 25.825042918226117 16-17 23.14871091301788 27.631636626870304 26.297824647205665 22.921827812906155 18-19 23.011988668877446 26.82007044631401 27.66943073075315 22.498510154055403 20-21 24.763266691586484 25.405297494610746 26.961383962025522 22.870051851777255 22-23 24.53562517327419 26.245323077870903 26.297453432191443 22.92159831666347 24-25 23.97937785233945 25.668330087057072 26.606136646904666 23.746155413698812 26-27 23.62180468810628 26.855163237777823 26.79722687417916 22.725805199936733 28-29 23.27654946156425 26.8691226145383 27.224505609470878 22.62982231442657 30-31 23.560261219228426 25.737700256622304 27.283357937164265 23.41868058698501 32-33 23.44550922253691 26.175275888236015 27.382614583438237 22.99660030578884 34-35 24.160804258256 25.85759012804981 26.60088921010773 23.38071640358646 36-37 22.933786870639974 25.89362725583864 27.45316528283288 23.719420590688507 38-39 23.311912725239235 26.12650717317874 26.758758694717237 23.802821406864783 40-41 23.716688762592604 26.02088509289175 27.044406294910118 23.218019849605533 42-43 23.72747015272846 26.18550862688926 27.137647548063082 22.949373672319197 44-45 24.01358351778038 25.721298538800237 26.78988677242157 23.475231170997816 46-47 23.607498919553734 25.66150285480877 26.529298323514954 24.201699902122538 48-49 23.286514857115776 25.596357992512203 27.069214729159757 24.047912421212263 50-51 23.70371555138517 25.816275633939817 26.7095315782178 23.77047723645721 52-53 23.77379458726824 26.244628557414458 26.055361845963553 23.926215009353744 54-55 23.90500765952607 25.475358599698833 26.560902414202054 24.058731326573046 56-57 24.009531014601624 25.910994494547566 26.123262180509883 23.956212310340927 58-59 24.338919086777906 25.935173178901355 26.419057146311342 23.306850588009397 60-61 23.815325394417474 26.296256352396846 26.214007035042474 23.674411218143206 62-63 23.53156873965549 25.76313878255595 26.771257998665952 23.934034479122605 64-65 24.112579038844995 25.52103141175788 26.208196936900436 24.1581926124967 66-67 23.60490588794226 25.843169870872117 26.17881468685985 24.373109554325765 68-69 24.022714374910404 25.71397090446385 26.707102803516864 23.556211917108882 70-71 24.213106616100763 25.758636663598118 26.487446789100606 23.540809931200513 72-73 23.815794618072218 25.682396833351696 26.703548499076472 23.798260049499614 74-75 23.87136024415702 25.556219025717763 26.42032967358453 24.15209105654069 76-77 23.761484139758036 24.991395595848324 26.38101427116698 24.86610599322666 78-79 23.867771278127247 24.880417357345046 26.408717299168107 24.8430940653596 80-81 23.15177344795534 25.91542687337491 26.424910677417962 24.50788900125179 82-83 23.354266422680954 25.981457006996717 26.769454236980895 23.894822333341427 84-85 23.6331474588832 25.26046217633646 26.96775049657683 24.1386398682035 86-87 23.247757530090148 26.20061442076093 26.47636920692805 24.07525884222087 88-89 23.84061551074762 25.327973442237223 25.91828417137908 24.91312687563607 90-91 23.660353037212385 25.57659703784268 25.978766585273092 24.78428333967184 92-93 23.593354398510982 25.59448703685932 26.58193204880771 24.230226515821986 94-95 23.644773336081997 25.374297876777003 26.355048948695988 24.625879838445016 96-97 23.822133127657583 26.061700355548922 26.365001001129084 23.751165515664415 98-99 22.389748438179392 26.303274580680934 26.7677629326329 24.53921404850678 100-101 23.320037439529763 25.7442410640983 26.19658598436147 24.739135512010467 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 3.0 2 2.5 3 2.5 4 1.0 5 2.5 6 7.5 7 19.0 8 29.5 9 39.5 10 43.5 11 49.5 12 56.5 13 59.0 14 58.0 15 63.0 16 84.5 17 89.5 18 102.0 19 122.5 20 147.5 21 175.0 22 212.5 23 266.5 24 315.5 25 425.0 26 641.0 27 858.5 28 1061.5 29 1463.0 30 2212.5 31 3753.5 32 6439.0 33 10565.0 34 15858.5 35 21443.0 36 26122.5 37 28398.0 38 28764.5 39 27592.5 40 25714.5 41 24031.0 42 22827.5 43 22923.5 44 23893.0 45 25713.5 46 27662.0 47 28798.0 48 29809.5 49 33482.5 50 38466.5 51 38293.5 52 35528.0 53 35732.5 54 38049.5 55 38144.0 56 32224.5 57 26732.5 58 25197.0 59 24254.5 60 20094.5 61 14572.5 62 11535.0 63 7960.5 64 4506.0 65 2783.0 66 2285.0 67 2000.0 68 1420.5 69 814.0 70 373.0 71 207.0 72 139.0 73 97.0 74 82.5 75 62.0 76 34.5 77 20.5 78 11.0 79 4.0 80 3.0 81 4.0 82 3.5 83 1.5 84 0.5 85 1.5 86 1.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47130076879605043 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 7.700992954183831E-4 22-23 0.0010662913321177613 24-25 3.554304440392538E-4 26-27 0.0020733442568956467 28-29 0.003317350811033035 30-31 5.923840733987563E-4 32-33 5.923840733987562E-5 34-35 0.004679834179850174 36-37 0.0017771522201962687 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009833575618419353 46-47 0.07647678387577943 48-49 8.293377027582588E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.007760231361523707 58-59 0.041822315581952194 60-61 0.032107216778212586 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 2.9619203669937815E-4 78-79 0.008293377027582587 80-81 0.0065754632147261936 82-83 0.0010070529247778856 84-85 0.002191821071575398 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06557691692524231 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 844047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.45250153220753 #Duplication Level Percentage of deduplicated Percentage of total 1 70.48055010131198 31.330367613693998 2 15.921193175543275 14.15473728060819 3 5.850112791145605 7.801564434359605 4 2.65343856030451 4.7180792667021905 5 1.495770935221771 3.3245379894888627 6 0.876079438319383 2.336635354453673 7 0.5919195052599114 1.8418611900156816 8 0.38399983567354273 1.3655802626916478 9 0.2703134332664857 1.081449747580926 >10 1.2118399083723173 9.734992703755088 >50 0.12132553586046446 3.8370076800039414 >100 0.12745788235464198 12.384917306452069 >500 0.01119922815625516 3.34224214998763 >1k 0.0047996692098236406 2.746027020206526 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1666 0.19738237325646557 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1660 0.1966715123683871 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1635 0.1937095920013933 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1427 0.16906641454800503 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1362 0.1613654215938212 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1362 0.1613654215938212 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1333 0.1579295939681084 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1309 0.15508615041579438 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1288 0.1525981373075196 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1266 0.14999164738456508 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1189 0.14086893265422423 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1164 0.13790701228723046 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1157 0.1370776745844722 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 1094 0.12961363525964786 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1093 0.12949515844496812 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1071 0.12688866852201358 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1060 0.1255854235605363 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1031 0.12214959593482354 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 992 0.11752900016231324 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 984 0.11658118564487523 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 968 0.1146855566099992 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 964 0.11421164935128021 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 869 0.10295635195670383 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 5.923840733987562E-5 0.0 18-19 0.0 0.0 0.0 1.1847681467975124E-4 0.0 20-21 0.0 0.0 0.0 3.554304440392537E-4 0.0 22-23 1.7771522201962686E-4 0.0 0.0 8.293377027582587E-4 0.0 24-25 3.554304440392537E-4 0.0 0.0 0.0013624833688171394 0.0 26-27 3.554304440392537E-4 0.0 0.0 0.0020733442568956467 0.0 28-29 3.554304440392537E-4 0.0 0.0 0.002724966737634279 0.0 30-31 3.554304440392537E-4 0.0 0.0 0.005449933475268558 0.0 32-33 3.554304440392537E-4 0.0 0.0 0.014217217761570148 0.0 34-35 3.554304440392537E-4 0.0 0.0 0.02464317745338826 0.0 36-37 3.554304440392537E-4 0.0 0.0 0.041585361952592687 0.0 38-39 3.554304440392537E-4 0.0 0.0 0.0741072475821844 0.0 40-41 3.554304440392537E-4 0.0 0.0 0.11433012616595994 0.0 42-43 3.554304440392537E-4 0.0 0.0 0.1498731705698853 0.0 44-45 3.554304440392537E-4 0.0 0.0 0.19702694281242633 0.0 46-47 3.554304440392537E-4 0.0 0.0 0.25188170800915116 0.0 48-49 3.554304440392537E-4 0.0 0.0 0.3086913406480919 0.0 50-51 4.1466885137912934E-4 0.0 0.0 0.3689960393200853 0.0 52-53 5.331456660588806E-4 0.0 0.0 0.4275828241792222 0.0 54-55 5.923840733987562E-4 0.0 0.0 0.49126411206958853 0.0 56-57 5.923840733987562E-4 0.0 0.0 0.5710582467564009 0.0 58-59 5.923840733987562E-4 0.0 0.0 0.6604490034322733 0.0 60-61 5.923840733987562E-4 0.0 0.0 0.7567706537669111 0.0 62-63 5.923840733987562E-4 0.0 0.0 0.8660655153089816 0.0 64-65 5.923840733987562E-4 0.0 0.0 0.9757158072950914 0.0 66-67 5.923840733987562E-4 0.0 0.0 1.0981615952666144 0.0 68-69 5.923840733987562E-4 0.0 0.0 1.2466130440603425 0.0 70-71 5.923840733987562E-4 0.0 0.0 1.4024100553642156 0.0 72-73 5.923840733987562E-4 0.0 0.0 1.5768079265728092 0.0 74-75 5.923840733987562E-4 0.0 0.0 1.7452227186400757 0.0 76-77 5.923840733987562E-4 0.0 0.0 1.927025390766154 0.0 78-79 5.923840733987562E-4 0.0 0.0 2.1344190548630584 0.0 80-81 5.923840733987562E-4 0.0 0.0 2.3649749362298547 0.0 82-83 5.923840733987562E-4 0.0 0.0 2.6244983987858497 0.0 84-85 5.923840733987562E-4 0.0 0.0 2.8913081854446494 0.0 86-87 5.923840733987562E-4 0.0 0.0 3.16724068683379 0.0 88-89 5.923840733987562E-4 0.0 0.0 3.4789531862562155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 975 0.0 51.41928 1 GTATCAA 1930 0.0 45.519955 1 GCGTAAT 75 1.307908E-7 44.563374 1 AAACCGT 235 0.0 44.45785 6 CCGTGCG 255 0.0 40.970963 9 ACCGTGC 255 0.0 40.970963 8 AACCGTG 260 0.0 40.18306 7 CGTAATT 95 1.931221E-8 39.990795 2 ATCAACG 2545 0.0 34.520542 3 TCAACGC 2655 0.0 33.090313 4 TCAGCGC 140 1.7085767E-8 30.528687 8 CAACGCA 3015 0.0 29.296738 5 TATCAAC 3035 0.0 28.947208 2 AACGCAG 3145 0.0 28.236744 6 CGCAGAG 3195 0.0 27.497581 8 GTACATG 5200 0.0 27.270582 1 AATGCGG 195 5.366019E-10 26.788706 7 TACATGG 5200 0.0 26.758265 2 TACTCCG 125 7.4010713E-6 26.59388 7 ACGCAGA 3345 0.0 26.26451 7 >>END_MODULE