##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224489_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 27267 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936443319763818 34.0 31.0 34.0 30.0 34.0 2 32.07562254740162 34.0 31.0 34.0 30.0 34.0 3 32.18450874683683 34.0 31.0 34.0 30.0 34.0 4 35.46275717900759 37.0 35.0 37.0 35.0 37.0 5 35.46741482377966 37.0 35.0 37.0 35.0 37.0 6 35.59551839219569 37.0 37.0 37.0 35.0 37.0 7 35.54659478490483 37.0 37.0 37.0 35.0 37.0 8 35.57721788242198 37.0 37.0 37.0 35.0 37.0 9 37.3015366560311 39.0 38.0 39.0 35.0 39.0 10-11 37.39228738034987 39.0 39.0 39.0 35.0 39.0 12-13 37.36412146550776 39.0 39.0 39.0 35.0 39.0 14-15 38.80208677155536 41.0 39.0 41.0 36.0 41.0 16-17 38.61849488392562 41.0 39.0 41.0 35.5 41.0 18-19 38.733414016943556 41.0 39.5 41.0 35.0 41.0 20-21 38.80261854989548 41.0 40.0 41.0 35.0 41.0 22-23 38.742820992408404 41.0 39.5 41.0 35.0 41.0 24-25 38.673964865955185 41.0 39.0 41.0 35.0 41.0 26-27 38.515953350203546 41.0 39.0 41.0 34.5 41.0 28-29 38.40717717387318 41.0 39.0 41.0 34.0 41.0 30-31 38.24183078446474 40.5 38.5 41.0 34.0 41.0 32-33 37.977261891663915 40.0 38.0 41.0 33.0 41.0 34-35 37.95168151978582 40.0 38.0 41.0 33.0 41.0 36-37 37.88135841860124 40.0 38.0 41.0 33.0 41.0 38-39 37.70840209777387 40.0 38.0 41.0 33.0 41.0 40-41 37.52426009461987 40.0 37.5 41.0 32.0 41.0 42-43 37.29917115927678 40.0 37.0 41.0 31.0 41.0 44-45 37.04224887226317 40.0 36.5 41.0 30.5 41.0 46-47 36.71960611728463 40.0 36.0 41.0 29.5 41.0 48-49 36.38696959694869 40.0 35.5 41.0 28.0 41.0 50-51 35.02651556826933 38.0 34.0 40.0 25.5 40.5 52-53 35.327887189643164 38.5 35.0 40.0 26.0 40.5 54-55 35.73820002200462 39.0 35.0 41.0 27.0 41.0 56-57 35.54406425349323 38.5 35.0 41.0 26.0 41.0 58-59 35.35568636080244 37.5 35.0 41.0 26.0 41.0 60-61 35.10538379726409 37.0 35.0 41.0 26.0 41.0 62-63 34.822642754978546 36.5 35.0 40.0 26.0 41.0 64-65 34.575439175560206 36.0 34.5 40.0 26.0 41.0 66-67 34.32212931382257 35.5 34.0 39.5 25.0 41.0 68-69 34.01617339641325 35.0 34.0 39.0 24.5 41.0 70-71 33.7462683830271 35.0 34.0 39.0 24.0 41.0 72-73 33.43559980929328 35.0 34.0 37.5 23.5 40.5 74-75 33.189459786555176 35.0 34.0 37.0 23.0 40.0 76-77 32.871309641691425 35.0 33.5 37.0 23.0 39.0 78-79 32.66938056991968 35.0 33.0 36.0 23.0 39.0 80-81 32.37776433050941 35.0 33.0 36.0 21.0 38.5 82-83 32.18828620677009 35.0 33.0 35.5 21.0 37.0 84-85 31.988997689514797 35.0 33.0 35.0 20.0 37.0 86-87 31.791011112333592 35.0 33.0 35.0 20.0 36.5 88-89 31.6270400117358 35.0 33.0 35.0 20.0 36.0 90-91 31.48259801224924 35.0 33.0 35.0 20.0 36.0 92-93 31.355227931198883 35.0 32.5 35.0 20.0 36.0 94-95 31.22098140609528 35.0 32.0 35.0 19.5 35.0 96-97 31.09282282612682 35.0 32.0 35.0 19.0 35.0 98-99 31.037847948069093 35.0 32.0 35.0 19.0 35.0 100-101 29.80993508636814 34.0 29.5 35.0 14.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 10.0 8 16.0 9 24.0 10 29.0 11 84.0 12 119.0 13 127.0 14 109.0 15 82.0 16 109.0 17 107.0 18 119.0 19 181.0 20 208.0 21 253.0 22 331.0 23 293.0 24 228.0 25 163.0 26 200.0 27 202.0 28 217.0 29 237.0 30 276.0 31 321.0 32 477.0 33 621.0 34 981.0 35 1870.0 36 4106.0 37 6678.0 38 6498.0 39 1988.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.902306449243426 18.910680182165418 11.991332451887763 24.195680916703395 2 17.713719881175045 19.672131147540984 36.42498257967507 26.189166391608904 3 21.09876407378883 24.586496497597828 29.53753621593868 24.77720321267466 4 13.650199875307148 16.763853742619283 37.44453001797044 32.14141636410312 5 13.818901969413577 37.77826676935489 34.154839182895074 14.24799207833645 6 29.893277588293543 36.248945611911836 18.52789085707999 15.329885942714636 7 26.068140976271685 31.3969266879378 22.20632999596582 20.328602339824698 8 26.486228774709357 33.076612755345295 20.783364506546377 19.65379396339898 9 26.04613635530128 14.402024425129278 20.74669013826237 38.80514908130707 10-11 26.29735577804672 24.091392525763744 27.448930942164523 22.16232075402501 12-13 26.62925881101698 22.998496350900353 27.331572963655702 23.040671874426963 14-15 24.117183057252397 24.608808907966907 25.535193440096858 25.738814594683834 16-17 22.994200983630623 26.693826616751082 27.011304411656756 23.300667987961535 18-19 22.784299339691856 25.99046221570066 28.14930300807043 23.07593543653705 20-21 24.379953037863224 24.29189903140593 28.179116524801877 23.14903140592897 22-23 24.070539875949645 25.77898484236797 27.564502514038242 22.585972767644144 24-25 22.93202743846521 25.13847621143758 28.42338872381791 23.5061076262793 26-27 22.815124509480324 26.049803792129683 28.288773975868263 22.84629772252173 28-29 22.79311988850992 26.22584075989291 28.587670077382914 22.39336927421425 30-31 22.644588696959694 25.679392672461216 28.72703267686214 22.948985953716946 32-33 22.899475556533538 25.07976675101771 28.453808633146295 23.566949059302452 34-35 23.180034473906186 25.497854549455383 27.9238640114424 23.398246965196023 36-37 22.527694226395717 25.561220746827086 28.963392267625267 22.947692759151934 38-39 22.96576133800363 25.35531552018192 28.201507454748846 23.477415687065598 40-41 23.484862376909394 25.263601855757063 28.417655364641593 22.833880402691946 42-43 23.545376194231014 25.368125722039863 28.10041626171309 22.98608182201603 44-45 23.574611674521815 25.109574721707716 27.634836509013557 23.68097709475692 46-47 23.400080683610224 25.092602779917115 27.118861627608464 24.388454908864198 48-49 23.038838156012762 25.725235632816222 27.296732313785892 23.939193897385117 50-51 23.169032163420987 26.23317563354971 26.519235706164963 24.07855649686434 52-53 23.65680126159827 26.126819965526092 26.130487402354497 24.085891370521143 54-55 23.297392452415007 25.40983606557377 26.555910074448967 24.736861407562255 56-57 23.731983716580483 26.433050940697544 26.024131734330876 23.810833608391096 58-59 23.968306371739846 26.11056087450937 26.372840321338174 23.548292432412605 60-61 23.79223065918345 26.249954146949854 26.23344704889769 23.724368144969006 62-63 23.669246854249973 26.193183902564293 26.675593382002273 23.46197586118346 64-65 24.67251311782189 25.62470186768429 25.885223645103288 23.817561369390525 66-67 23.270913192597618 25.847807347358 25.897327733250187 24.983951726794196 68-69 23.456925954450433 25.914108629478854 27.120695346022668 23.50827007004804 70-71 23.54861187516045 25.32181758169216 26.731947042212195 24.397623500935197 72-73 24.00154032346793 25.22829794256794 26.66593317930099 24.104228554663145 74-75 23.47709685700664 25.954450434591266 26.605420471632375 23.96303223676972 76-77 24.12439945721935 25.318150144863754 25.63905086734881 24.918399530568085 78-79 23.732668182818575 25.045851368204826 26.11693932946959 25.104541119507008 80-81 23.356391860401107 26.134424484852932 26.12525000458724 24.383933650158717 82-83 23.443720759563345 25.99578020365104 26.476470048619394 24.084028988166224 84-85 23.188246299455237 25.62959702122196 26.94106641721235 24.241090262110458 86-87 23.244889720723698 26.384454475393593 26.448677015670302 23.92197878821241 88-89 23.492616710996973 25.745207740988718 26.002017793267907 24.760157754746402 90-91 23.220376279018595 25.87926797960905 26.205669857336705 24.694685884035646 92-93 23.13052407672278 25.798584369384237 26.731947042212195 24.338944511680786 94-95 23.642131514284667 25.5657021307808 26.78512487622401 24.007041478710526 96-97 23.396413246781826 25.963619026662265 27.095023288223864 23.54494443833205 98-99 22.62075035757509 27.018007114827448 26.642094839916382 23.71914768768108 100-101 23.449224841757637 26.23245573800569 26.082010824694983 24.236308595541693 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 0.5 3 1.0 4 2.0 5 2.0 6 1.0 7 3.0 8 6.5 9 9.0 10 8.0 11 11.5 12 13.5 13 14.0 14 19.0 15 17.5 16 16.0 17 19.0 18 21.5 19 24.0 20 32.0 21 44.0 22 48.0 23 60.5 24 82.0 25 114.0 26 146.5 27 180.0 28 210.5 29 237.0 30 264.0 31 285.5 32 336.5 33 380.5 34 408.0 35 451.0 36 501.5 37 526.5 38 545.0 39 587.5 40 630.5 41 674.0 42 696.0 43 714.5 44 751.5 45 791.0 46 888.5 47 951.0 48 982.5 49 1091.0 50 1190.0 51 1175.5 52 1120.0 53 1177.5 54 1241.0 55 1234.5 56 1068.5 57 861.0 58 787.0 59 763.5 60 674.5 61 530.0 62 411.0 63 279.5 64 184.5 65 148.0 66 130.0 67 116.5 68 101.0 69 70.5 70 45.5 71 35.5 72 31.0 73 22.5 74 17.0 75 14.0 76 9.5 77 8.5 78 6.0 79 2.0 80 1.5 81 2.0 82 2.0 83 1.0 84 0.0 85 0.0 86 1.0 87 1.0 88 0.0 89 0.0 90 1.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1430300363076246 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03850808669820662 16-17 0.07701617339641324 18-19 0.025672057798804413 20-21 0.04034180511240694 22-23 0.07334873656801262 24-25 0.022004620970403784 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.018337184142003155 38-39 0.009168592071001578 40-41 0.0018337184142003153 42-43 0.0018337184142003153 44-45 0.009168592071001578 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.022004620970403784 60-61 0.022004620970403784 62-63 0.029339494627205046 64-65 0.051344115597608826 66-67 0.02017090255620347 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.018337184142003155 80-81 0.06418014449701104 82-83 0.053177834011809144 84-85 0.02750577621300473 86-87 0.06601386291121135 88-89 0.03484064986980599 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.053177834011809144 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 27267.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.21663549345362 #Duplication Level Percentage of deduplicated Percentage of total 1 90.87962962962963 71.99178494150438 2 5.782407407407407 9.161257197344776 3 1.0324074074074074 2.4535152382000223 4 0.5231481481481481 1.657681446437085 5 0.30092592592592593 1.191916969230205 6 0.2916666666666667 1.3862911211354385 7 0.24537037037037035 1.3606190633366342 8 0.17592592592592593 1.1149007958337918 9 0.1527777777777778 1.0892287380349874 >10 0.5972222222222222 7.485238566765687 >50 0.018518518518518517 1.1075659221769905 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 86 0.3153995672424542 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 82 0.3007298199288517 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 68 0.2493857043312429 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 66 0.24205083067444164 No Hit ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT 49 0.17970440459163092 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 49 0.17970440459163092 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 34 0.12469285216562145 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 34 0.12469285216562145 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 34 0.12469285216562145 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 33 0.12102541533722082 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 0.0 0.0 22-23 0.0 0.0 0.0 0.0 0.0 24-25 0.0 0.0 0.0 0.0 0.0 26-27 0.0 0.0 0.0 0.0 0.0 28-29 0.0 0.0 0.0 0.02017090255620347 0.0 30-31 0.0 0.0 0.0 0.0476766787692082 0.0 32-33 0.0 0.0 0.0 0.0733487365680126 0.0 34-35 0.0 0.0 0.0 0.11369054168041956 0.0 36-37 0.0 0.0 0.0 0.16320093886382808 0.0 38-39 0.0 0.0 0.0 0.23288223860344004 0.0 40-41 0.0 0.0 0.0 0.27872519895844794 0.0 42-43 0.0 0.0 0.0 0.31539956724245427 0.0 44-45 0.0 0.0 0.0 0.3924157406388675 0.0 46-47 0.0 0.0 0.0 0.49510397183408517 0.0 48-49 0.0 0.0 0.0 0.5977922030293028 0.0 50-51 0.0 0.0 0.0 0.6839769684967176 0.0 52-53 0.0 0.0 0.0 0.7279862104375252 0.0 54-55 0.0 0.0 0.0 0.819672131147541 0.0 56-57 0.0 0.0 0.0 0.9223603623427586 0.0 58-59 0.0 0.0 0.0 1.0452194960941799 0.0 60-61 0.0 0.0 0.0 1.1735797850882017 0.0 62-63 0.0 0.0 0.0 1.331279568709429 0.0 64-65 0.0 0.0 0.0 1.459639857703451 0.0 66-67 0.0 0.0 0.0 1.6356768254666814 0.0 68-69 0.0 0.0 0.0 1.80254520115891 0.0 70-71 0.0 0.0 0.0 1.9455752374665347 0.0 72-73 0.0 0.0 0.0 2.110609894744563 0.0 74-75 0.0 0.0 0.0 2.295815454578795 0.0 76-77 0.0 0.0 0.0 2.517695382697033 0.0 78-79 0.0 0.0 0.0 2.728573000330069 0.0 80-81 0.0 0.0 0.0 3.0164667913595187 0.0 82-83 0.0 0.0 0.0 3.3208640481167713 0.0 84-85 0.0 0.0 0.0 3.5904206550042175 0.0 86-87 0.0 0.0 0.0 3.89481791176147 0.0 88-89 0.0 0.0 0.0 4.224887226317527 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACCA 15 6.549208E-4 94.99632 4 AGACCAG 15 6.549208E-4 94.99632 5 GTAGACC 20 0.0020526617 71.247246 3 GGTATCA 60 3.0013325E-10 63.56415 1 GACCAGG 25 0.004969727 56.997795 6 GCCTGAC 25 0.004969727 56.997795 2 ACCAGGC 25 0.004969727 56.997795 7 TGTAGAC 25 0.004969727 56.997795 2 GTATCAA 80 3.970854E-9 47.498165 2 ATCAACG 110 6.596565E-8 34.54412 4 ACGCAGA 130 7.677954E-9 32.883347 8 TATCAAC 135 1.1094016E-8 31.665443 3 AGTACAT 75 3.0015328E-4 31.665443 2 TGGTCGC 30 0.0039190426 31.665442 82-83 TCAACGC 120 1.4168836E-7 31.665442 5 GAGTACA 80 4.2880047E-4 29.795696 1 CGCAGAG 150 3.0935553E-8 28.498898 9 TTCTCCC 35 0.008324412 27.141808 68-69 CAACGCA 160 5.7889338E-8 26.717718 6 AACGCAG 160 5.7889338E-8 26.717718 7 >>END_MODULE