##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224486_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 705362 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.120725244626165 34.0 31.0 34.0 30.0 34.0 2 32.289374817469614 34.0 31.0 34.0 31.0 34.0 3 32.43558484863092 34.0 31.0 34.0 31.0 34.0 4 35.72689767807169 37.0 35.0 37.0 35.0 37.0 5 35.73772899589147 37.0 37.0 37.0 35.0 37.0 6 35.8430990044828 37.0 37.0 37.0 35.0 37.0 7 35.79984320107973 37.0 37.0 37.0 35.0 37.0 8 35.83746501796241 37.0 37.0 37.0 35.0 37.0 9 37.54289995775219 39.0 38.0 39.0 35.0 39.0 10-11 37.62113921645907 39.0 38.5 39.0 35.0 39.0 12-13 37.62743456551388 39.0 38.5 39.0 35.0 39.0 14-15 39.11098556485889 41.0 40.0 41.0 36.0 41.0 16-17 38.94163847783125 41.0 39.5 41.0 35.5 41.0 18-19 39.02941326581245 41.0 39.5 41.0 36.0 41.0 20-21 39.10225246043875 41.0 40.0 41.0 36.0 41.0 22-23 39.05332722772137 41.0 40.0 41.0 36.0 41.0 24-25 38.9942717356478 41.0 39.0 41.0 35.5 41.0 26-27 38.82224233797681 41.0 39.0 41.0 35.0 41.0 28-29 38.73548617589266 41.0 39.0 41.0 35.0 41.0 30-31 38.65209920579787 41.0 39.0 41.0 35.0 41.0 32-33 38.45427666928471 40.0 39.0 41.0 34.0 41.0 34-35 38.45055588477973 40.0 38.0 41.0 34.0 41.0 36-37 38.44910840107633 40.0 38.0 41.0 34.0 41.0 38-39 38.352881215602764 40.0 38.0 41.0 34.0 41.0 40-41 38.2667254544475 40.0 38.0 41.0 34.0 41.0 42-43 38.128831011594045 40.0 38.0 41.0 33.0 41.0 44-45 37.96087540865541 40.0 38.0 41.0 33.0 41.0 46-47 37.799741125833265 40.0 38.0 41.0 33.0 41.0 48-49 37.60962456157264 40.0 37.0 41.0 32.5 41.0 50-51 36.36010445700222 38.5 35.5 40.0 30.5 40.5 52-53 36.7221632296608 39.0 36.0 40.0 31.0 40.5 54-55 37.21960638650792 40.0 36.0 41.0 32.0 41.0 56-57 37.09877694006765 40.0 35.5 41.0 32.0 41.0 58-59 36.967403262438296 39.5 35.0 41.0 31.5 41.0 60-61 36.72709899314111 39.0 35.0 41.0 31.0 41.0 62-63 36.44015413362217 39.0 35.0 41.0 31.0 41.0 64-65 36.18487670160854 38.0 35.0 41.0 30.0 41.0 66-67 35.92124540306963 37.5 35.0 40.0 30.0 41.0 68-69 35.58942642217755 37.0 35.0 40.0 29.5 41.0 70-71 35.2663930010406 36.0 35.0 39.5 29.0 41.0 72-73 34.92008855027631 36.0 34.5 39.0 29.0 41.0 74-75 34.609716712836814 35.5 34.0 39.0 29.0 40.5 76-77 34.22969340565554 35.0 34.0 37.0 29.0 39.5 78-79 33.96358961781327 35.0 34.0 37.0 29.0 39.0 80-81 33.62731476887045 35.0 34.0 36.5 28.0 39.0 82-83 33.351537224857594 35.0 34.0 36.0 27.0 37.5 84-85 33.11928130520215 35.0 34.0 36.0 27.0 37.0 86-87 32.87591052537562 35.0 34.0 35.0 27.0 37.0 88-89 32.70432628919619 35.0 33.0 35.0 26.5 36.0 90-91 32.52630209736277 35.0 33.0 35.0 26.0 36.0 92-93 32.3875052809763 35.0 33.0 35.0 25.5 36.0 94-95 32.24404561062263 35.0 33.0 35.0 25.0 35.5 96-97 32.11749782381246 35.0 33.0 35.0 25.0 35.0 98-99 32.05183012410649 35.0 33.0 35.0 25.0 35.0 100-101 30.868707131940763 34.0 31.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 80.0 8 309.0 9 271.0 10 313.0 11 678.0 12 1188.0 13 1461.0 14 1624.0 15 1623.0 16 1768.0 17 1914.0 18 2200.0 19 2384.0 20 2903.0 21 3535.0 22 4198.0 23 3964.0 24 3627.0 25 3991.0 26 4332.0 27 4632.0 28 5268.0 29 6062.0 30 7387.0 31 8983.0 32 11604.0 33 15940.0 34 25419.0 35 43524.0 36 89623.0 37 169070.0 38 217117.0 39 58353.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.49172199535409 19.559093310009143 13.7169234788634 24.232261215773363 2 15.314689478593971 20.517408082658267 39.623342340528694 24.54456009821907 3 18.92406866838399 26.39938981599493 28.965026419096034 25.71151509652504 4 12.5269010805799 17.622865989378504 39.53501889809771 30.31521403194388 5 13.784127866258745 38.32230826157349 34.499732052478016 13.393831819689748 6 29.353863689850034 37.907627572792414 19.455400205851745 13.283108531505809 7 26.667299911251245 31.744267482512527 23.186534006651904 18.401898599584328 8 25.383136602198586 34.74768983869276 21.34209101142392 18.527082547684735 9 26.16613880532266 16.09939293582586 20.79868209515114 36.93578616370034 10-11 25.07676909161537 25.76159475560067 28.584329748412873 20.57730640437109 12-13 25.998565275702408 23.20149086568315 28.437596581613413 22.362347277001028 14-15 23.12684549861437 24.955608755712007 25.747559899814775 26.16998584585885 16-17 23.025432319639517 27.44570865518922 26.631542432482092 22.897316592689172 18-19 22.831888776702552 27.161588029087774 27.44399979579566 22.562523398414015 20-21 24.060493756245 25.741474716142992 27.17432234923188 23.023709178380134 22-23 23.707383300609457 26.461650645208884 26.59011076937045 23.240855284811204 24-25 23.1792464869617 26.244274917402834 27.14915701260582 23.427321583029652 26-27 23.151658297441596 26.852594837827954 27.182779905920647 22.812966958809803 28-29 22.94396352511193 26.98458380235964 27.015348147476047 23.056104525052383 30-31 23.276204275251573 26.301813820421287 27.198374735242332 23.22360716908481 32-33 23.210918648863988 26.404597922768737 27.25557940461777 23.12890402374951 34-35 23.54202522959842 26.313439056824723 26.969839600091866 23.17469611348499 36-37 23.188473616331265 26.267318680742118 27.399267866752602 23.144939836174018 38-39 23.166080644246584 26.502155050189984 26.930613055067205 23.40115125049623 40-41 23.72636366600834 26.155534414729136 27.026057565115558 23.092044354146964 42-43 23.551353638921398 26.389561338901334 27.015501045950213 23.04358397622705 44-45 23.54054197756234 26.294170816865464 26.834730517696688 23.33055668787551 46-47 23.464192854165663 26.216538458266818 26.4637873886033 23.85548129896422 48-49 23.206594628006613 26.363838709768885 26.84798727461927 23.58157938760523 50-51 23.244447531905603 26.581173922042865 26.565224664782054 23.609153881269478 52-53 23.548192275739265 26.585994142015025 26.15302497157488 23.71278861067083 54-55 23.484182589932544 26.061795220043045 26.68360359645118 23.77041859357323 56-57 23.388416160779855 26.629730549703556 26.30138850689433 23.680464782622256 58-59 23.71115528809887 26.471263846271647 26.592143995553315 23.225436870076173 60-61 23.51226685043546 26.58061012373198 26.523536868613824 23.383586157218737 62-63 23.389695183692456 26.47551003621945 26.694259061244054 23.440535718844043 64-65 24.019381175409283 26.074588589730137 26.257563679586504 23.64846655527408 66-67 23.314748538078035 26.342245716327582 26.182582851697873 24.16042289389651 68-69 23.423433641165815 26.43500783994601 26.819136840374163 23.32242167851401 70-71 23.727887240877735 26.016003130307556 26.577346100300268 23.678763528514438 72-73 23.492972402822947 26.21171823829466 26.712737573047598 23.58257178583479 74-75 23.511686198008967 26.062149647982167 26.662337920103436 23.763826233905426 76-77 23.487230670209055 25.89911279598277 26.325560492342937 24.288096041465234 78-79 23.471683987085193 25.67916884678484 26.665858427734225 24.183288738395746 80-81 23.371497229559314 26.409406731333924 26.339259116352835 23.879836922753928 82-83 23.365936239580652 26.51707769590999 26.526297573682783 23.590688490826576 84-85 23.4241050346102 26.05564292997551 26.823080272116563 23.697171763297735 86-87 23.31677623949459 26.552112288446654 26.43337785283597 23.69773361922278 88-89 23.514866755493973 26.195286290788644 26.265913218226565 24.02393373549081 90-91 23.362401150047777 26.19023990518344 26.435858466999925 24.011500477768863 92-93 23.33776854975512 26.091123494430697 26.77065441535601 23.80045354045818 94-95 23.430593085536223 25.97864642552335 26.730458970004058 23.860301518936375 96-97 23.460081490071765 26.36915512885582 26.656596187489544 23.514167193582868 98-99 22.873404091678204 26.547493225076323 26.636596851104795 23.94250583214068 100-101 23.458100808261758 26.05330400131058 26.398962315868157 24.089632874559506 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 2.5 3 4.0 4 3.0 5 2.5 6 4.5 7 9.0 8 19.0 9 25.0 10 32.5 11 37.0 12 36.0 13 45.0 14 56.5 15 62.5 16 77.5 17 107.0 18 113.5 19 125.0 20 158.0 21 189.5 22 226.5 23 297.0 24 417.0 25 592.0 26 837.0 27 1147.5 28 1567.5 29 2192.5 30 3267.0 31 4872.5 32 6981.5 33 9560.5 34 12269.0 35 14963.0 36 18127.5 37 20552.0 38 21684.5 39 22618.0 40 23079.0 41 23090.5 42 23443.5 43 24092.0 44 25002.0 45 26570.0 46 28061.5 47 28010.5 48 28475.5 49 30220.0 50 31322.5 51 30295.5 52 28661.0 53 28441.5 54 28314.5 55 27164.5 56 23229.5 57 19606.0 58 18151.0 59 16354.0 60 13297.0 61 10182.5 62 8031.0 63 5723.0 64 3608.5 65 2423.0 66 1854.5 67 1497.0 68 1149.5 69 817.5 70 566.5 71 368.5 72 235.0 73 193.5 74 152.0 75 113.5 76 86.0 77 54.5 78 31.5 79 21.5 80 16.0 81 11.5 82 9.5 83 9.5 84 5.5 85 3.0 86 4.5 87 2.5 88 0.5 89 2.0 90 3.5 91 4.0 92 3.5 93 2.0 94 1.5 95 2.5 96 2.5 97 1.5 98 2.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15396349675769322 2 0.0 3 1.4177117565165122E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03799467507464253 16-17 0.07520960868320097 18-19 0.026369438671207123 20-21 0.04217692475636623 22-23 0.06719953725888267 24-25 0.01871379518601796 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.023037816043393323 38-39 0.00595438937736935 40-41 0.0055290758504143965 42-43 0.003189851452162152 44-45 0.010561952586048015 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.01672899872689484 60-61 0.018146710483411356 62-63 0.03062257394075666 64-65 0.04933636912677462 66-67 0.017863168132108052 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0177213969564564 80-81 0.059543893773693506 82-83 0.05153382234937521 84-85 0.031614972170318216 86-87 0.06060717759108089 88-89 0.03523013714943533 90-91 0.0 92-93 0.003189851452162152 94-95 0.0 96-97 0.0 98-99 4.961991147807793E-4 100-101 0.04685537355287073 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 705362.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.95427512958348 #Duplication Level Percentage of deduplicated Percentage of total 1 81.00604029309048 53.426946686486154 2 12.533059929421498 16.532177656012472 3 3.343449839589322 6.615444318067077 4 1.2565190400609976 3.3149120989497267 5 0.5806062457879058 1.9146732038325052 6 0.3144915460688867 1.2445237173213257 7 0.19387240824826707 0.8950699907548796 8 0.12154144586453199 0.6412942368157375 9 0.07722395787595783 0.45839251479116594 >10 0.4707877621588832 5.9179473595243035 >50 0.05499293337488441 2.5411913525172243 >100 0.045033043285318486 5.363354425170193 >500 0.0021650501573060353 0.9899929771893029 >1k 2.1650501573060353E-4 0.14407946256800902 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1009 0.14304711623251606 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 941 0.13340667628820377 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 939 0.13312313393690048 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 909 0.12886999866735097 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 827 0.11724476226391556 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 0.0 0.0 20-21 0.0 0.0 0.0 0.0 0.0 22-23 0.0 0.0 0.0 0.0 0.0 24-25 0.0 0.0 0.0 0.0 0.0 26-27 0.0 0.0 0.0 0.0 0.0 28-29 0.0 0.0 0.0 2.8354235130330244E-4 0.0 30-31 0.0 0.0 0.0 0.0015594829321681635 0.0 32-33 0.0 0.0 0.0 0.006025274965195176 0.0 34-35 0.0 0.0 0.0 0.01176700757908705 0.0 36-37 0.0 0.0 0.0 0.020627706057315252 0.0 38-39 0.0 0.0 0.0 0.03820733183812 0.0 40-41 0.0 0.0 0.0 0.05890592348326108 0.0 42-43 0.0 0.0 0.0 0.08017159983100876 0.0 44-45 0.0 0.0 0.0 0.1027132167596213 0.0 46-47 0.0 0.0 0.0 0.13432818892993953 0.0 48-49 0.0 0.0 0.0 0.1680697287350325 0.0 50-51 0.0 0.0 0.0 0.20329986588446783 0.0 52-53 0.0 0.0 0.0 0.24008948596607133 0.0 54-55 0.0 0.0 0.0 0.27737530516245557 0.0 56-57 0.0 0.0 0.0 0.31877248845273776 0.0 58-59 0.0 0.0 0.0 0.36725823052560247 0.0 60-61 0.0 0.0 0.0 0.42219456109061726 0.0 62-63 0.0 0.0 0.0 0.48769284424168013 0.0 64-65 0.0 0.0 0.0 0.5474493947788512 0.0 66-67 0.0 0.0 0.0 0.6146489320377339 0.0 68-69 0.0 0.0 0.0 0.6968762139156914 0.0 70-71 0.0 0.0 0.0 0.7909413889605621 0.0 72-73 0.0 0.0 0.0 0.8908900677949763 0.0 74-75 0.0 0.0 0.0 0.9936032845545975 0.0 76-77 0.0 0.0 0.0 1.0948987895577023 0.0 78-79 0.0 0.0 0.0 1.2146954329833477 0.0 80-81 0.0 0.0 0.0 1.3583096339184701 0.0 82-83 0.0 0.0 0.0 1.52014143092483 0.0 84-85 0.0 0.0 0.0 1.673396071804265 0.0 86-87 0.0 1.4177117565165122E-4 0.0 1.8357240679254057 0.0 88-89 0.0 1.4177117565165122E-4 0.0 2.028745523575129 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 170 0.0 53.1052 9 ACCGTGC 200 0.0 47.484863 8 AAACCGT 225 0.0 46.426357 6 GTATCAA 970 0.0 43.633545 1 GGTATCA 525 0.0 43.479465 1 AACCGTG 220 0.0 43.164997 7 ATCAACG 1195 0.0 34.170788 3 TCAACGC 1225 0.0 33.33395 4 TATCAAC 1495 0.0 27.948975 2 GTAATCG 35 0.008373336 27.155384 14-15 ATGCGGG 215 5.820766E-11 26.50318 8 ACGCAGA 1530 0.0 26.378609 7 CGCAGAG 1560 0.0 25.873163 8 TACATGG 2190 0.0 25.58364 2 CAACGCA 1630 0.0 25.051588 5 AATGCGG 190 1.1943484E-8 24.990261 7 CGGCTTA 200 0.0 24.949009 16-17 GTACATG 2235 0.0 24.68213 1 TGCGCGG 185 0.0 24.403149 12-13 AACGCAG 1700 0.0 23.74075 6 >>END_MODULE