##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224484_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 621170 Sequences flagged as poor quality 0 Sequence length 101 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.406508685223045 34.0 31.0 34.0 31.0 34.0 2 32.564629650498254 34.0 31.0 34.0 31.0 34.0 3 32.71128515543249 34.0 33.0 34.0 31.0 34.0 4 35.98051419096222 37.0 37.0 37.0 35.0 37.0 5 36.00245504451277 37.0 37.0 37.0 35.0 37.0 6 36.110431926847724 37.0 37.0 37.0 35.0 37.0 7 36.06561005843811 37.0 37.0 37.0 35.0 37.0 8 36.10272389201024 37.0 37.0 37.0 35.0 37.0 9 37.85271020815558 39.0 39.0 39.0 37.0 39.0 10-11 37.94245858621633 39.0 39.0 39.0 37.0 39.0 12-13 37.969274111756846 39.0 39.0 39.0 37.0 39.0 14-15 39.52717130576171 41.0 40.0 41.0 38.0 41.0 16-17 39.37362235780865 41.0 40.0 41.0 37.5 41.0 18-19 39.46560039924658 41.0 40.0 41.0 37.5 41.0 20-21 39.53299579825169 41.0 40.0 41.0 38.0 41.0 22-23 39.50998277444178 41.0 40.0 41.0 38.0 41.0 24-25 39.4823792198593 41.0 40.0 41.0 37.5 41.0 26-27 39.359278458393035 41.0 40.0 41.0 37.0 41.0 28-29 39.28852568540013 41.0 40.0 41.0 37.0 41.0 30-31 39.2365849928361 41.0 40.0 41.0 37.0 41.0 32-33 39.06871387864835 41.0 40.0 41.0 36.0 41.0 34-35 39.0976866236296 41.0 40.0 41.0 36.0 41.0 36-37 39.11905677994752 41.0 40.0 41.0 36.0 41.0 38-39 39.057512436209095 41.0 39.5 41.0 36.0 41.0 40-41 39.00432168327511 41.0 39.0 41.0 35.5 41.0 42-43 38.90833910201716 41.0 39.0 41.0 35.0 41.0 44-45 38.80919555033243 41.0 39.0 41.0 35.0 41.0 46-47 38.724690503404865 41.0 39.0 41.0 35.0 41.0 48-49 38.59033436901331 40.5 39.0 41.0 35.0 41.0 50-51 37.421218024051385 39.0 37.5 40.0 33.0 40.5 52-53 37.79361527440153 39.5 38.0 40.5 33.5 41.0 54-55 38.354258093597565 40.0 38.0 41.0 34.0 41.0 56-57 38.30777886890867 40.0 38.0 41.0 34.0 41.0 58-59 38.240228117906526 40.0 38.0 41.0 34.0 41.0 60-61 38.0810357873046 40.0 37.0 41.0 34.0 41.0 62-63 37.85551620329379 40.0 37.0 41.0 33.5 41.0 64-65 37.671789526216656 40.0 36.0 41.0 33.0 41.0 66-67 37.46220921808845 39.5 36.0 41.0 33.0 41.0 68-69 37.1885160262086 39.0 35.0 41.0 33.0 41.0 70-71 36.90498655762512 39.0 35.0 41.0 32.5 41.0 72-73 36.58856351723361 38.5 35.0 40.5 32.0 41.0 74-75 36.265760580839384 37.0 35.0 40.0 32.0 41.0 76-77 35.84570165977108 37.0 35.0 39.0 31.5 41.0 78-79 35.49566704766811 36.0 35.0 39.0 31.0 40.5 80-81 35.07937601622744 36.0 35.0 38.0 31.0 39.0 82-83 34.709220503243884 35.5 35.0 37.0 31.0 39.0 84-85 34.37527488449217 35.0 35.0 37.0 31.0 39.0 86-87 34.05067211874366 35.0 34.0 36.5 30.0 37.0 88-89 33.80311750406491 35.0 34.0 36.0 30.0 37.0 90-91 33.56726982951527 35.0 34.0 36.0 30.0 37.0 92-93 33.37362557753916 35.0 34.0 35.0 29.5 36.0 94-95 33.20656422557432 35.0 34.0 35.0 29.0 36.0 96-97 33.05556369431879 35.0 34.0 35.0 29.0 36.0 98-99 32.968889353961075 35.0 34.0 35.0 29.0 36.0 100-101 31.891709193940468 34.5 32.0 35.0 26.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 9.0 7 96.0 8 373.0 9 278.0 10 230.0 11 435.0 12 683.0 13 829.0 14 887.0 15 929.0 16 965.0 17 1021.0 18 1108.0 19 1296.0 20 1476.0 21 1776.0 22 2000.0 23 2069.0 24 2039.0 25 2248.0 26 2420.0 27 2724.0 28 3101.0 29 3578.0 30 4474.0 31 5580.0 32 7189.0 33 10196.0 34 15587.0 35 26392.0 36 53204.0 37 111717.0 38 239685.0 39 114563.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.71732155237742 21.24973799197046 14.226794150368423 22.806146305283693 2 14.199494502310156 21.293687718337974 42.46486469082538 22.04195308852649 3 18.14884516130071 26.988146543050277 30.799347681548824 24.063660614100186 4 11.536938358259412 17.615950544939388 41.473348680715425 29.373762416085775 5 12.087351288697135 39.2969718434567 36.80377352415603 11.811903343690133 6 28.260701579277814 39.85994172287779 19.601558349566144 12.27779834827825 7 25.192137418098103 33.1691807395721 24.30220390553311 17.33647793679669 8 23.201378044657663 38.2085419450392 21.770207833604328 16.819872176698812 9 24.25616175926075 17.77468325901122 21.825748184876925 36.1434067968511 10-11 23.155577378173447 27.496498543071944 30.534636250945795 18.81328782780881 12-13 23.619701530981857 24.917816378769096 30.476600608529065 20.985881481719982 14-15 20.918601926550174 27.30481863002845 27.22872609828901 24.547853345132374 16-17 20.95579232930381 30.39410263680181 27.940063020336623 20.71004201355775 18-19 20.986719956457815 29.688634749688813 29.006597349144215 20.318047944709157 20-21 21.52158350720014 28.596184244325606 29.192713135472776 20.689519113001477 22-23 21.25329714361653 28.7177483982426 28.924335839498067 21.104618618642807 24-25 21.049296891541687 28.666633927126618 29.033021583139245 21.251047598192454 26-27 21.05092003799282 29.05267479111998 28.968881304634802 20.927523866252397 28-29 20.984915562567412 29.00486179306792 29.069175909976337 20.941046734388333 30-31 21.27549624096463 28.532366340937266 28.934752161244106 21.257385256854 32-33 20.78851200154547 28.82544231047861 29.026433987475247 21.35961170050067 34-35 21.299885699566946 28.840494550606117 28.672344124796755 21.187275625030185 36-37 21.12013474530352 28.62902933624895 29.01355584772557 21.237280070721962 38-39 21.052661235792254 28.688057442766524 28.937357117558037 21.32192420388318 40-41 21.28462847492228 28.621993176940702 29.104984632821846 20.988393715315176 42-43 21.294400900273608 28.591817201955422 28.916057374733256 21.197724523037714 44-45 21.441147276112822 28.535949385635057 28.80660324575322 21.216300092498894 46-47 21.454191284189513 28.357937440636217 28.665341210940642 21.522530064233624 48-49 21.10734581515527 28.52858315758971 28.947711576541042 21.416359450713976 50-51 21.18960992964889 28.678864079076583 28.702851071365327 21.428674919909206 52-53 21.240964631260365 28.57221050598065 28.646827760516448 21.53999710224254 54-55 21.098974515833024 28.51948741890304 28.884282885522484 21.497255179741455 56-57 21.131091327655877 28.637893008355203 28.644815428948593 21.586200235040327 58-59 21.274165124290434 28.640135380245724 28.727243744822406 21.35845575064144 60-61 21.383699951453927 28.512324503529857 28.69918260649745 21.404792938518774 62-63 21.176245142859905 28.472945749791062 28.830679250812814 21.520129856536226 64-65 21.370193294952973 28.385923121709865 28.545210467868326 21.698673115468832 66-67 21.262570273170724 28.61348810136243 28.299588525074533 21.82435310039231 68-69 21.294573144227826 28.538805801954375 28.855627283996327 21.310993769821465 70-71 21.319284575881 28.192926252072702 28.929842072218552 21.557947099827746 72-73 21.22486597871758 28.417341468519087 28.80950464446126 21.548287908302076 74-75 21.127227651045608 28.309078030168877 28.787449490477645 21.77624482830787 76-77 21.126422718418468 28.279215029702016 28.793405991918476 21.80095625996104 78-79 21.352952352736594 28.019495575335227 28.702677984877567 21.92487408705061 80-81 21.215425651862972 28.38342170879266 28.44615969434762 21.954992944996746 82-83 21.126262630329865 28.55310194539494 28.58821359803439 21.732421826240806 84-85 21.357762264789002 28.110260312245867 28.712126701933222 21.81985072103191 86-87 20.95081241065496 28.481849115106613 28.798115448889604 21.769223025348825 88-89 21.314989166291586 28.13495153213839 28.446395487122338 22.103663814447682 90-91 21.28241866155803 28.012943316644396 28.658177310559108 22.04646071123847 92-93 21.405376861688854 27.947912155493988 28.84070173856906 21.806009244248102 94-95 21.564789027158426 27.797382359096545 28.59032149009128 22.04750712365375 96-97 21.514239258174094 27.886971360497125 28.825925270054896 21.772864111273886 98-99 21.18472642915041 27.889472112459746 28.758646059135707 22.167155399254142 100-101 21.568194812410916 27.81117884378447 28.396292508515796 22.22433383528881 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.5 2 1.5 3 2.5 4 3.5 5 4.5 6 5.0 7 8.0 8 15.0 9 18.0 10 15.5 11 16.5 12 20.5 13 22.0 14 25.0 15 31.0 16 39.0 17 43.5 18 49.0 19 54.0 20 68.5 21 82.0 22 89.5 23 101.0 24 145.5 25 193.5 26 242.5 27 346.0 28 536.0 29 1052.0 30 2163.0 31 4467.0 32 8709.5 33 15111.5 34 22841.0 35 30300.0 36 37270.5 37 42627.0 38 45301.5 39 45446.5 40 40919.0 41 33715.5 42 28048.5 43 23650.5 44 19857.0 45 16902.0 46 15058.0 47 13560.5 48 12635.5 49 12759.0 50 13046.5 51 12904.0 52 12722.0 53 12844.5 54 13034.5 55 12842.5 56 11488.5 57 10028.5 58 9238.0 59 8600.5 60 7266.5 61 5602.5 62 4547.0 63 3444.0 64 2272.5 65 1572.5 66 1227.0 67 1005.0 68 790.5 69 569.0 70 389.0 71 284.0 72 221.5 73 162.5 74 115.5 75 90.0 76 68.5 77 46.5 78 36.5 79 20.0 80 14.5 81 14.0 82 14.5 83 13.5 84 9.0 85 7.0 86 5.5 87 3.5 88 2.5 89 3.0 90 2.0 91 1.5 92 2.0 93 1.5 94 2.5 95 3.5 96 5.0 97 5.5 98 4.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1545470644107088 2 0.0 3 1.6098652542782167E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.034692596229695574 16-17 0.06729236762882947 18-19 0.026240803644734936 20-21 0.03936120546710241 22-23 0.059162548094724474 24-25 0.017145064958063012 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.023584525975175876 38-39 0.00482959576283465 40-41 0.006600447542540689 42-43 0.004105156398409453 44-45 0.013120401822367468 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.016823091907207367 60-61 0.017789011059774297 62-63 0.028494615000724435 64-65 0.04499573385707616 66-67 0.017949997585202118 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0170645716953491 80-81 0.05376949949289244 82-83 0.047249545213065666 84-85 0.02978250720414701 86-87 0.05352801970475072 88-89 0.030828919619427856 90-91 0.0 92-93 0.004346636186551186 94-95 0.0 96-97 0.0 98-99 8.854258898530193E-4 100-101 0.042661429238372746 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 621170.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.32976306637725 #Duplication Level Percentage of deduplicated Percentage of total 1 72.89616557491664 39.60431404132627 2 13.65764490023057 14.840332229484849 3 5.316106415799087 8.66468406018037 4 2.6693541280222584 5.801015092628213 5 1.581008906933356 4.294791965976065 6 1.017640944409444 3.317291483784569 7 0.6513016195171273 2.4769543871179316 8 0.4594901105466293 1.9971191069873488 9 0.33336282689769564 1.6300371060440584 >10 1.3097941741498318 11.834808764611498 >50 0.0766797466792568 2.837593674128215 >100 0.031151121880101055 2.587795259133251 >500 2.995300180771892E-4 0.11326282859727364 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 696 0.1120466216977639 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 1.609865254278217E-4 0.0 20-21 0.0 0.0 0.0 1.609865254278217E-4 1.609865254278217E-4 22-23 0.0 0.0 0.0 4.024663135695542E-4 1.609865254278217E-4 24-25 0.0 0.0 0.0 8.049326271391084E-4 1.609865254278217E-4 26-27 0.0 0.0 0.0 0.0016903585169921278 1.609865254278217E-4 28-29 0.0 0.0 0.0 0.0033807170339842556 1.609865254278217E-4 30-31 0.0 0.0 0.0 0.008934752161244104 1.609865254278217E-4 32-33 0.0 0.0 0.0 0.023423539449748055 1.609865254278217E-4 34-35 0.0 0.0 0.0 0.04290290902651448 1.609865254278217E-4 36-37 0.0 0.0 0.0 0.07501972084936491 1.609865254278217E-4 38-39 0.0 0.0 0.0 0.1261329426726983 1.609865254278217E-4 40-41 0.0 0.0 0.0 0.18650288970813142 1.609865254278217E-4 42-43 0.0 0.0 0.0 0.2470338232689924 3.219730508556434E-4 44-45 0.0 0.0 0.0 0.3214900912793599 3.219730508556434E-4 46-47 0.0 0.0 0.0 0.40045398200170645 4.024663135695542E-4 48-49 0.0 0.0 0.0 0.4904454497158588 4.8295957628346505E-4 50-51 0.0 0.0 0.0 0.5891301898031135 4.8295957628346505E-4 52-53 0.0 0.0 0.0 0.6937714313311976 8.049326271391085E-4 54-55 0.0 0.0 0.0 0.803564241672972 8.049326271391085E-4 56-57 0.0 0.0 0.0 0.938068483667917 8.854258898530193E-4 58-59 0.0 0.0 0.0 1.0909251895616336 9.659191525669301E-4 60-61 0.0 0.0 0.0 1.2598805479981325 9.659191525669301E-4 62-63 0.0 0.0 0.0 1.4304457716889096 9.659191525669301E-4 64-65 0.0 0.0 0.0 1.6064845372442327 9.659191525669301E-4 66-67 0.0 0.0 0.0 1.8059468422493037 9.659191525669301E-4 68-69 0.0 0.0 0.0 2.0335012959415297 9.659191525669301E-4 70-71 0.0 0.0 0.0 2.293092068193892 9.659191525669301E-4 72-73 0.0 0.0 0.0 2.55855884862437 9.659191525669301E-4 74-75 0.0 0.0 0.0 2.8216913244361446 0.001046412415280841 76-77 0.0 0.0 0.0 3.110340164528229 0.0011269056779947518 78-79 0.0 0.0 0.0 3.4380282370365602 0.0011269056779947518 80-81 0.0 0.0 0.0 3.806123927427274 0.0011269056779947518 82-83 0.0 0.0 0.0 4.2007019012508655 0.0014488787288503952 84-85 0.0 0.0 0.0 4.58505723070979 0.0014488787288503952 86-87 0.0 0.0 0.0 4.993721525508315 0.0014488787288503952 88-89 0.0 0.0 0.0 5.452372136452179 0.0014488787288503952 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 480 0.0 44.589638 1 CCGTGCG 65 2.5885001E-6 43.84355 9 TAGCGTG 70 2.0549071E-4 33.9211 5 ACCGTAT 80 4.4970884E-4 29.68096 8 GGACCGC 65 0.005848326 29.224329 6 AGGACCG 85 6.412095E-4 27.93502 5 ATCAACG 765 0.0 27.314241 4 ACCGTGC 140 5.810052E-7 27.136879 8 GTATCAA 775 0.0 26.9618 2 TCAACGC 775 0.0 26.9618 5 AAACCGT 95 0.0012274955 24.994493 6 GTACTAC 115 1.2694809E-4 24.815102 1 CAACGCA 855 0.0 24.43906 6 TCGCACC 260 2.3646862E-11 23.781137 1 GTACATG 1785 0.0 23.181614 1 GTATATA 415 0.0 22.92158 1 ACATGGG 1575 0.0 22.915585 3 CGCACCA 270 4.0017767E-11 22.865332 2 ACGCAGA 900 0.0 22.689445 8 AACGCAG 900 0.0 22.689445 7 >>END_MODULE