##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224483_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1024899 Sequences flagged as poor quality 0 Sequence length 101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.18458209052795 34.0 33.0 34.0 31.0 34.0 2 33.31606919315952 34.0 34.0 34.0 31.0 34.0 3 33.4406600064982 34.0 34.0 34.0 31.0 34.0 4 36.63081240200254 37.0 37.0 37.0 35.0 37.0 5 36.67333561648514 37.0 37.0 37.0 35.0 37.0 6 36.722278975782004 37.0 37.0 37.0 36.0 37.0 7 36.70477871478067 37.0 37.0 37.0 36.0 37.0 8 36.691706207148215 37.0 37.0 37.0 36.0 37.0 9 38.548579908849554 39.0 39.0 39.0 38.0 39.0 10-11 38.58412097192016 39.0 39.0 39.0 37.5 39.0 12-13 38.586401684458664 39.0 39.0 39.0 38.0 39.0 14-15 40.212743402032785 41.0 40.0 41.0 39.0 41.0 16-17 40.229876309763206 41.0 40.0 41.0 39.0 41.0 18-19 40.237893685133855 41.0 40.0 41.0 39.0 41.0 20-21 40.25108278962122 41.0 40.0 41.0 39.0 41.0 22-23 40.184217176521784 41.0 40.0 41.0 39.0 41.0 24-25 40.16291654104453 41.0 40.0 41.0 38.0 41.0 26-27 40.11982888069946 41.0 40.0 41.0 38.0 41.0 28-29 40.09570845517461 41.0 40.0 41.0 38.0 41.0 30-31 40.04649580104966 41.0 40.0 41.0 38.0 41.0 32-33 40.02118306291644 41.0 40.0 41.0 38.0 41.0 34-35 39.955836623901476 41.0 40.0 41.0 38.0 41.0 36-37 39.88029064327314 41.0 40.0 41.0 38.0 41.0 38-39 39.81203221000313 41.0 40.0 41.0 38.0 41.0 40-41 39.71205260225642 41.0 40.0 41.0 37.0 41.0 42-43 39.65227549251195 41.0 40.0 41.0 37.0 41.0 44-45 39.48156745201234 41.0 40.0 41.0 36.5 41.0 46-47 39.32196928672972 41.0 39.5 41.0 36.0 41.0 48-49 39.27228683021449 41.0 39.0 41.0 35.0 41.0 50-51 39.17759262132171 41.0 39.0 41.0 35.0 41.0 52-53 39.01917993870616 41.0 39.0 41.0 35.0 41.0 54-55 38.885679466952354 40.5 38.5 41.0 35.0 41.0 56-57 38.74774733900609 40.0 38.0 41.0 35.0 41.0 58-59 38.56505372724532 40.0 37.0 41.0 35.0 41.0 60-61 38.39906078550179 40.0 37.0 41.0 35.0 41.0 62-63 38.243497164110806 40.0 36.5 41.0 35.0 41.0 64-65 38.04389310556455 40.0 36.0 41.0 34.5 41.0 66-67 37.82191903787593 39.5 35.0 41.0 34.0 41.0 68-69 37.59481275715949 39.0 35.0 41.0 34.0 41.0 70-71 37.321139448862766 39.0 35.0 41.0 34.0 41.0 72-73 37.010897659183975 38.0 35.0 40.0 34.0 41.0 74-75 36.651008050549365 37.0 35.0 39.5 34.0 41.0 76-77 34.66536458714469 35.5 33.0 38.0 30.5 39.0 78-79 35.88458716419862 36.0 35.0 39.0 33.0 39.5 80-81 35.68573098422381 36.0 35.0 38.0 33.0 39.0 82-83 35.35954030592283 35.5 35.0 37.0 33.0 39.0 84-85 35.04718855223783 35.0 35.0 37.0 33.0 38.0 86-87 34.75981438170981 35.0 35.0 36.0 33.0 37.0 88-89 34.5356327794251 35.0 35.0 36.0 33.0 37.0 90-91 34.344111956397654 35.0 35.0 36.0 33.0 36.5 92-93 34.20814050945508 35.0 35.0 35.5 33.0 36.0 94-95 34.0657269643155 35.0 35.0 35.0 33.0 36.0 96-97 33.997201187629216 35.0 35.0 35.0 33.0 36.0 98-99 33.938397344518826 35.0 35.0 35.0 32.5 36.0 100-101 33.18713551286517 34.5 33.5 35.0 30.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 0.0 12 0.0 13 3.0 14 16.0 15 39.0 16 106.0 17 223.0 18 431.0 19 613.0 20 791.0 21 1106.0 22 1610.0 23 1659.0 24 1664.0 25 1889.0 26 2509.0 27 3494.0 28 4586.0 29 5449.0 30 5933.0 31 6579.0 32 7829.0 33 10932.0 34 17541.0 35 34386.0 36 88212.0 37 194898.0 38 416561.0 39 215789.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.765226588975466 21.906819578730467 14.84001188110659 21.487941951187473 2 14.04450584886901 21.576077252490244 42.57336576579741 21.806051132843336 3 18.68593880958026 28.62116169495726 30.584964957522644 22.107934537939837 4 11.882146435892707 18.177986318651886 42.463306140409934 27.476561105045473 5 12.073677503832085 39.606048986290354 36.42310120314294 11.897172306734614 6 26.27068618468747 40.05106844674451 20.856006299157283 12.822239069410744 7 24.713947423111936 33.28737758549867 24.61013231547694 17.388542675912454 8 23.65315996990923 37.135366509285305 22.152621868106028 17.058851652699435 9 25.2269735847142 17.344733481055204 22.442991943596393 34.9853009906342 10-11 23.933431489346756 27.60691541312851 29.613698520537145 18.845954576987587 12-13 24.485876169261555 25.040516187448713 30.10969861420491 20.363909029084816 14-15 21.674574762976643 27.02227243855248 27.179653800032977 24.123498998437896 16-17 20.851078984368215 30.139555214708963 28.028225220241215 20.981140580681608 18-19 21.055147873107497 29.234587993548633 29.395969749214313 20.314294384129557 20-21 22.273512279366567 27.737610865556306 29.035945320961275 20.952931534115855 22-23 22.1098741768023 28.200036979560256 28.72848367703672 20.961605166600723 24-25 21.639892418405175 28.251828355351005 28.724754158102794 21.383525068141026 26-27 21.750663129973475 28.967937049853422 28.51607684648218 20.765322973690925 28-29 21.527744914322735 28.692747863495967 28.9048248864361 20.8746823357452 30-31 21.596557687757496 27.947662803659895 29.06978048917325 21.38599901940935 32-33 21.57509486319113 28.27425585205147 29.036234860673805 21.11441442408359 34-35 21.986900681798776 28.200319555062265 28.523484857724817 21.289294905414142 36-37 21.630142065412535 28.113535243150416 28.799176488954803 21.457146202482242 38-39 21.592322755705684 28.20077880844844 28.598574103399454 21.608324332446415 40-41 21.759997814418785 28.176386160977813 28.805277398065567 21.258338626537835 42-43 21.755655923169016 28.066472891475158 28.798935309723202 21.378935875632624 44-45 21.771713531702876 28.11058109132035 28.43347194513685 21.684233431839928 46-47 21.997236705919114 27.777794051594505 28.268742554728842 21.956226687757532 48-49 21.509241949395644 27.66125601526795 28.763274569418044 22.06622746591836 50-51 21.460895171133938 28.031542620297216 28.543105223051246 21.964456985517597 52-53 21.988312994743872 27.996026925579987 28.270834491984086 21.744825587692056 54-55 21.710675881233175 27.965438545651818 28.337328848989024 21.986556724125986 56-57 21.892375036347918 27.759807107213184 28.201836813951353 22.145981042487545 58-59 21.882191025356335 27.970053611648638 28.249946925199914 21.897808437795113 60-61 21.551117927886736 28.25858764889398 28.29450422678586 21.895790196433428 62-63 21.650133330211073 27.977147016437716 28.288836265817412 22.083883387533795 64-65 21.501191824755413 27.927434800892577 28.21102372038611 22.3603496539659 66-67 21.585053746759435 27.939338412858245 28.129649848424087 22.345957991958233 68-69 21.7635591409495 27.769907083527258 28.363282625897774 22.103251149625475 70-71 21.91650104059034 27.904895994629715 28.357818672864347 21.820784291915594 72-73 21.736629658141922 27.872844055853307 28.282494177475048 22.10803210852972 74-75 21.836737083361385 27.661798869937428 28.275664236183275 22.225799810517916 76-77 21.670171090697096 27.492913908254017 28.07629074197845 22.760624259070443 78-79 21.63585481186001 27.45906118330793 28.17786893723983 22.727215067592226 80-81 21.626940856477248 27.87134545720663 27.99038872016295 22.511324966153172 82-83 21.17301886829272 27.969038749373105 28.305658926679243 22.552283455654926 84-85 21.629602815171207 27.464653023708735 28.320708222608502 22.585035938511556 86-87 21.069344393935403 27.82644924036417 28.325278881138534 22.77892748456189 88-89 21.655353356769787 27.419531095259142 27.922556271398452 23.00255927657262 90-91 21.628716585731862 27.437337727912702 27.91367734771914 23.020268338636296 92-93 21.63497165816908 27.265334079423475 28.37124846997044 22.728445792437007 94-95 21.47836030672291 27.260198321980994 27.957486542576394 23.303954828719707 96-97 21.395961943567123 27.485586384609604 28.017736381828843 23.10071528999443 98-99 20.840687716545727 27.67780044667816 28.12608852189338 23.355423314882735 100-101 21.18419922126714 27.415136082981522 28.089009478358335 23.311655217393003 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 2.5 3 2.5 4 0.5 5 1.5 6 3.5 7 5.0 8 9.0 9 12.5 10 16.5 11 17.0 12 15.5 13 27.0 14 29.5 15 32.0 16 43.0 17 47.0 18 48.5 19 59.5 20 70.0 21 82.5 22 106.5 23 129.5 24 167.5 25 227.5 26 303.0 27 392.0 28 494.5 29 701.0 30 1222.5 31 2554.0 32 5743.0 33 12158.0 34 22497.5 35 36289.5 36 53453.5 37 67542.0 38 75363.5 39 76889.0 40 71717.0 41 65018.0 42 57267.0 43 48397.0 44 40079.0 45 34054.5 46 29949.0 47 26045.0 48 23262.0 49 22923.5 50 23895.5 51 22675.0 52 20696.5 53 21151.5 54 22749.0 55 22555.0 56 19126.5 57 16262.0 58 15639.0 59 15353.5 60 13146.5 61 9786.5 62 7761.5 63 5575.0 64 3352.5 65 2220.5 66 1782.0 67 1553.5 68 1233.0 69 781.5 70 479.0 71 358.0 72 308.0 73 287.0 74 212.5 75 139.5 76 104.5 77 77.0 78 49.0 79 37.5 80 32.5 81 20.5 82 12.5 83 4.5 84 3.5 85 3.5 86 1.0 87 0.0 88 0.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.4675582667170131 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 8.781353089426373E-4 22-23 8.293500140013797E-4 24-25 2.4392647470628814E-4 26-27 0.0023904794521216236 28-29 0.0034637559408292914 30-31 6.342088342363492E-4 32-33 1.951411797650305E-4 34-35 0.0035613265307118066 36-37 0.0018538412077677897 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009220420743897692 46-47 0.07405607772082907 48-49 6.829941291776068E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.007903217780483736 58-59 0.03917459183782988 60-61 0.029515103439460864 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 3.90282359530061E-4 78-79 0.007512935420953675 80-81 0.006000591277774688 82-83 4.8785294941257627E-4 84-85 0.0022929088622391084 86-87 0.0 88-89 0.0 90-91 0.0 92-93 4.878529494125762E-5 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.06546986581116773 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1024899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.447470086904964 #Duplication Level Percentage of deduplicated Percentage of total 1 62.29818483022485 21.460148584076467 2 15.417742616079464 10.622044551499945 3 6.877211433982562 7.107076054603052 4 3.935567644353393 5.422813948154182 5 2.5185934910078727 4.337958697128362 6 1.7360153616165048 3.5880802343815237 7 1.210278027074483 2.9183711294140635 8 0.92692549390607 2.5544190579295165 9 0.7677586884979132 2.3802610010393925 >10 3.937389640849309 24.153755407559768 >50 0.23073206497020485 5.439704095064422 >100 0.1370734025633633 8.387948272429488 >500 0.006243509009818608 1.5207622662518259 >1k 2.8379586408266397E-4 0.10665670046803431 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1091 0.10644951356182414 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 4.878529494125762E-5 0.0 16-17 0.0 0.0 0.0 3.90282359530061E-4 0.0 18-19 0.0 0.0 0.0 4.3906765447131863E-4 0.0 20-21 0.0 0.0 0.0 7.317794241188644E-4 0.0 22-23 0.0 0.0 0.0 0.0013659882583552134 0.0 24-25 0.0 0.0 0.0 0.0020489823875328205 0.0 26-27 0.0 0.0 0.0 0.0032198294661230035 0.0 28-29 0.0 0.0 0.0 0.0055127383283621115 0.0 30-31 0.0 0.0 0.0 0.013708667878493393 0.0 32-33 0.0 0.0 0.0 0.03175922700675872 0.0 34-35 0.0 0.0 0.0 0.05585916270773998 0.0 36-37 0.0 0.0 0.0 0.09630217221404255 0.0 38-39 0.0 0.0 0.0 0.164747941016627 0.0 40-41 0.0 0.0 0.0 0.2457803159140559 0.0 42-43 0.0 0.0 0.0 0.32798353789007506 0.0 44-45 0.0 0.0 0.0 0.42213915712670225 0.0 46-47 0.0 0.0 0.0 0.5320036413344145 0.0 48-49 0.0 0.0 0.0 0.6457221638424859 0.0 50-51 0.0 0.0 0.0 0.7751983366165838 0.0 52-53 0.0 0.0 0.0 0.9042842270311513 0.0 54-55 0.0 0.0 0.0 1.0451761588215034 0.0 56-57 0.0 0.0 0.0 1.2112900880964856 0.0 58-59 0.0 0.0 0.0 1.391649323494315 0.0 60-61 0.0 0.0 0.0 1.586692932669463 0.0 62-63 0.0 0.0 0.0 1.7857857213247355 0.0 64-65 0.0 0.0 0.0 1.9935622924795517 0.0 66-67 0.0 0.0 0.0 2.224999731680878 0.0 68-69 0.0 0.0 0.0 2.4897087420321418 0.0 70-71 0.0 0.0 0.0 2.7822741557948634 0.0 72-73 0.0 0.0 0.0 3.091768066902202 0.0 74-75 0.0 0.0 0.0 3.4077016369417867 0.0 76-77 0.0 0.0 0.0 3.740856416095635 0.0 78-79 0.0 0.0 0.0 4.129431290302752 0.0 80-81 0.0 0.0 0.0 4.561766574072177 0.0 82-83 0.0 0.0 0.0 5.0165430935145805 0.0 84-85 0.0 0.0 0.0 5.474002804178753 0.0 86-87 0.0 0.0 0.0 5.957269935866851 0.0 88-89 0.0 0.0 0.0 6.508397412818239 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1130 0.0 47.261242 1 GATACCG 80 1.0793914E-5 35.615852 5 TAGTACG 80 1.0793914E-5 35.615852 4 GTATCAA 1935 0.0 34.499485 1 CCGTTAT 75 3.082858E-4 31.658535 9 TCAACGC 2170 0.0 30.199617 4 ATCAACG 2190 0.0 29.92382 3 AGTGCGA 40 4.5016196E-4 29.679878 10-11 AGTACGT 105 6.917198E-5 27.135887 5 CAACGCA 2465 0.0 26.778112 5 GTACATG 4945 0.0 26.517462 1 GTACGTT 90 8.960309E-4 26.382113 6 TACATGG 4945 0.0 26.02466 2 CCGTGCG 130 1.003967E-5 25.570354 9 ACATGGG 4785 0.0 25.406221 3 CATGGGA 2515 0.0 25.112837 4 ATACCGT 190 1.19398464E-8 24.99358 6 TATCAAC 2670 0.0 24.722115 2 AACGCAG 2680 0.0 24.62987 6 CGCAGAG 2745 0.0 24.046646 8 >>END_MODULE