##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224482_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793870 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.001952460730344 34.0 31.0 34.0 30.0 34.0 2 32.17388993160089 34.0 31.0 34.0 30.0 34.0 3 32.32176804766524 34.0 31.0 34.0 30.0 34.0 4 35.63274465592603 37.0 35.0 37.0 35.0 37.0 5 35.62779548288763 37.0 35.0 37.0 35.0 37.0 6 35.736010933780086 37.0 37.0 37.0 35.0 37.0 7 35.690594177888066 37.0 37.0 37.0 35.0 37.0 8 35.72252383891569 37.0 37.0 37.0 35.0 37.0 9 37.42126544648368 39.0 38.0 39.0 35.0 39.0 10-11 37.49949361986219 39.0 38.0 39.0 35.0 39.0 12-13 37.50241223374104 39.0 38.0 39.0 35.0 39.0 14-15 38.958947938579364 41.0 39.0 41.0 36.0 41.0 16-17 38.79055260936929 41.0 39.0 41.0 35.5 41.0 18-19 38.86309597289228 41.0 39.0 41.0 35.5 41.0 20-21 38.931108997694835 41.0 39.0 41.0 36.0 41.0 22-23 38.880938944663484 41.0 39.0 41.0 35.5 41.0 24-25 38.822267499716574 41.0 39.0 41.0 35.0 41.0 26-27 38.64340194238351 41.0 39.0 41.0 35.0 41.0 28-29 38.55647587136433 41.0 39.0 41.0 34.0 41.0 30-31 38.48032423444644 40.0 39.0 41.0 34.0 41.0 32-33 38.29685653822414 40.0 38.0 41.0 34.0 41.0 34-35 38.281249448902216 40.0 38.0 41.0 34.0 41.0 36-37 38.29830009951252 40.0 38.0 41.0 34.0 41.0 38-39 38.19397382442969 40.0 38.0 41.0 33.5 41.0 40-41 38.1049655485155 40.0 38.0 41.0 33.0 41.0 42-43 37.95083514933175 40.0 38.0 41.0 33.0 41.0 44-45 37.79860682479499 40.0 38.0 41.0 33.0 41.0 46-47 37.62276758159396 40.0 37.0 41.0 32.0 41.0 48-49 37.42878430977364 40.0 37.0 41.0 32.0 41.0 50-51 36.17343078841624 38.5 35.0 40.0 29.5 40.5 52-53 36.558619799211456 39.0 35.5 40.0 30.5 40.5 54-55 37.04928010883394 39.5 36.0 41.0 31.0 41.0 56-57 36.90942660637132 39.0 35.0 41.0 31.0 41.0 58-59 36.766398780656786 39.0 35.0 41.0 31.0 41.0 60-61 36.52510549586204 39.0 35.0 41.0 31.0 41.0 62-63 36.233834254978774 38.5 35.0 41.0 30.0 41.0 64-65 35.97358824492675 37.5 35.0 40.5 30.0 41.0 66-67 35.72342008137352 37.0 35.0 40.0 29.5 41.0 68-69 35.40033947623667 36.5 35.0 40.0 29.0 41.0 70-71 35.090720143096476 36.0 34.5 39.0 29.0 41.0 72-73 34.770253316034115 35.5 34.0 39.0 29.0 41.0 74-75 34.4862401904594 35.0 34.0 38.5 29.0 40.5 76-77 34.12754229281872 35.0 34.0 37.0 28.0 39.5 78-79 33.88134896141686 35.0 34.0 37.0 28.0 39.0 80-81 33.55559537455755 35.0 34.0 36.5 27.0 39.0 82-83 33.27952057641679 35.0 34.0 36.0 27.0 38.0 84-85 33.04605351002053 35.0 33.5 36.0 27.0 37.0 86-87 32.808526584957235 35.0 33.0 35.0 26.0 37.0 88-89 32.63286180356985 35.0 33.0 35.0 26.0 36.0 90-91 32.44415332485167 35.0 33.0 35.0 25.5 36.0 92-93 32.298103593787395 35.0 33.0 35.0 25.0 36.0 94-95 32.15166211092496 35.0 33.0 35.0 25.0 35.5 96-97 32.01758726239812 35.0 33.0 35.0 25.0 35.0 98-99 31.946718606320935 35.0 33.0 35.0 25.0 35.0 100-101 30.739187776336173 34.0 30.5 35.0 21.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 2.0 7 81.0 8 301.0 9 310.0 10 439.0 11 1025.0 12 1771.0 13 1993.0 14 2142.0 15 2137.0 16 2199.0 17 2283.0 18 2546.0 19 2809.0 20 3173.0 21 3802.0 22 4256.0 23 4421.0 24 4399.0 25 4619.0 26 4936.0 27 5607.0 28 6018.0 29 7046.0 30 8711.0 31 10734.0 32 14014.0 33 19752.0 34 31195.0 35 53545.0 36 109488.0 37 186957.0 38 222798.0 39 68350.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.13391765571241 19.082284989004528 13.662268057365704 24.12152929791736 2 15.771367820131532 19.783616692426584 39.318703715600435 25.126311771841447 3 19.977502557100173 24.89973144149909 28.115883245073487 27.00688275632725 4 12.728532379356821 16.546033985413228 38.34179399649817 32.38363963873178 5 14.161638555430988 38.24228148185471 34.03340597327018 13.562673989444116 6 31.136836005895173 36.57324247042967 18.60997392520186 13.679947598473301 7 27.860984795999343 30.75226422462116 22.006625769962337 19.38012520941716 8 25.64361923236802 35.09567057578697 20.4832025394586 18.77750765238641 9 25.99027548591079 16.188922619572473 20.015871616259588 37.804930278257146 10-11 25.743824555657728 25.326690768009875 27.824580850769014 21.10490382556338 12-13 26.249448902213206 22.768463350422614 27.941854459798204 23.040233287565975 14-15 23.238640122743067 24.86215033505455 25.011672563332716 26.88753697886967 16-17 23.389444820902344 27.54608632617363 26.042580014813183 23.021888838110847 18-19 23.28855068793149 27.11536256427897 26.760906791866546 22.83517995592299 20-21 24.209235546576917 25.678822062323526 26.699000678648776 23.41294171245078 22-23 24.09170239895321 26.267847497143205 26.075104297517846 23.565345806385736 24-25 23.526239730074675 26.1963258204286 26.495871871145432 23.78156257835129 26-27 23.53874059984632 26.8793379268646 26.530792195195684 23.05112927809339 28-29 23.255003967904063 26.85918349351909 26.681068688828148 23.2047438497487 30-31 23.440298789474348 26.276090543791803 26.660410394649 23.623200272084848 32-33 23.28977036542507 26.347008956126317 26.796137906710165 23.567082771738445 34-35 23.924005189766586 26.039212969377857 26.49715948455037 23.53962235630519 36-37 23.267709094574503 26.176637351006725 26.995690849986143 23.55996270443263 38-39 23.381140442042543 26.461644085838643 26.425804501048734 23.731410971070087 40-41 23.929474840517198 26.09301147873059 26.67507331673839 23.302440364013826 42-43 23.795747972180546 26.176916303555032 26.681871375969507 23.345464348294918 44-45 23.876045656117718 26.006160552308 26.47040667204193 23.647387119532354 46-47 23.676924433471473 26.00224218070969 26.473603990577804 23.847229395241033 48-49 23.254311159257814 26.251527328151962 26.602277450968042 23.89188406162218 50-51 23.354138586922293 26.420761585650045 26.409046821267967 23.8160530061597 52-53 23.63730837542671 26.371824102182977 25.945746784738056 24.045120737652258 54-55 23.71981558693489 25.73462909544384 26.419061055336517 24.126494262284755 56-57 23.64738559209946 26.258014536385048 26.231057981785433 23.863541889730055 58-59 23.81392746991352 26.30822011006511 26.548420585804422 23.329431834216948 60-61 23.66779325746432 26.497919534328474 26.17424254355434 23.660044664652872 62-63 23.563055811946157 26.10904073512873 26.583018576680388 23.744884876244722 64-65 24.18940439001857 25.65150454334341 26.102782470930986 24.05630859570703 66-67 23.29187303371211 26.123579579458507 26.06291365279435 24.521633734035035 68-69 23.583458248831672 26.25511733659163 26.744429188658092 23.4169952259186 70-71 23.683348659100357 25.923765855870606 26.540176603222186 23.852708881806844 72-73 23.54125990401451 26.185962437174855 26.637232796301664 23.635544862508976 74-75 23.615075516142443 25.917467595450137 26.49709650194616 23.97036038646126 76-77 23.582135614143375 25.59115472306549 26.264375779409725 24.56233388338141 78-79 23.605932382232083 25.447974484431686 26.61848795185656 24.32760518147967 80-81 23.499849370444085 26.17342945053615 26.154584999817228 24.172136179202532 82-83 23.34186816365448 26.33494051981591 26.39569053037154 23.927500786158074 84-85 23.654516322725804 25.664102100440857 26.788449433982947 23.89293214285039 86-87 23.393825260390077 26.508737232598328 26.258714858526538 23.838722648485057 88-89 23.613087936106496 25.889256216051376 26.00644807235148 24.491207775490647 90-91 23.304382329600564 25.778213057553508 26.40973962991422 24.507664982931715 92-93 23.278916303505056 25.87132017406563 26.757583563911297 24.092179958518013 94-95 23.524128635670827 25.72102485293562 26.62784838827516 24.126998123118394 96-97 23.759557610188068 26.095141521911646 26.492939650068653 23.652361217831636 98-99 23.002946980179843 26.158086371271633 26.556706537081 24.282260111467526 100-101 23.542760133519273 25.673913769537464 26.26135320284305 24.521972894100212 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 2.0 3 4.0 4 4.5 5 3.5 6 3.0 7 11.0 8 15.5 9 16.5 10 22.5 11 23.0 12 29.5 13 29.5 14 28.5 15 38.0 16 39.5 17 38.5 18 52.5 19 69.5 20 87.0 21 106.0 22 121.0 23 164.0 24 224.5 25 292.5 26 416.0 27 581.5 28 810.0 29 1291.0 30 2258.0 31 4046.0 32 6788.5 33 10801.0 34 15458.5 35 19768.0 36 24022.0 37 26830.5 38 27535.5 39 26925.0 40 25321.5 41 23805.0 42 22887.0 43 22654.5 44 23105.0 45 24436.0 46 26441.5 47 27667.5 48 28831.0 49 30998.0 50 33112.0 51 33198.0 52 32708.0 53 33206.0 54 34119.5 55 33902.0 56 29559.5 57 25240.0 58 23246.0 59 21148.0 60 17580.5 61 13595.5 62 10940.0 63 8056.0 64 5141.5 65 3405.5 66 2626.0 67 2213.5 68 1762.5 69 1209.5 70 800.0 71 537.0 72 379.0 73 292.0 74 220.5 75 162.5 76 106.5 77 70.0 78 50.5 79 35.5 80 27.0 81 18.5 82 16.0 83 14.5 84 7.0 85 7.0 86 7.5 87 4.0 88 2.0 89 3.0 90 5.5 91 5.0 92 3.0 93 2.0 94 4.5 95 4.5 96 2.5 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16010177988839483 2 1.259652084094373E-4 3 2.519304168188746E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.04314308388023228 16-17 0.08282212452920504 18-19 0.032624988978044264 20-21 0.048055727008200336 22-23 0.07387859473213498 24-25 0.021288120221194907 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.026452693765981833 38-39 0.0069280864625190525 40-41 0.006802121254109615 42-43 0.00466071271114918 44-45 0.013856172925038105 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.019902502928691095 60-61 0.022358824492675122 62-63 0.03369569324952448 64-65 0.057503117638908134 66-67 0.022547772305289277 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.019965485532895816 80-81 0.06713945608223008 82-83 0.05725118722208926 84-85 0.037600614710217035 86-87 0.06814717774950559 88-89 0.03772657991862648 90-91 0.0 92-93 0.0039679040648972754 94-95 0.0 96-97 0.0 98-99 8.187738546613425E-4 100-101 0.053724161386625016 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 793870.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.425004455500165 #Duplication Level Percentage of deduplicated Percentage of total 1 77.427284855644 45.236894626682805 2 13.32874003966849 15.5746339240767 3 4.354880039403259 7.633016571159123 4 1.801760934988782 4.2107156261786285 5 0.9724194880210699 2.8406806460123097 6 0.5385404192205977 1.8878535835458203 7 0.3355806125876593 1.3724409149929429 8 0.2162569820978481 1.0107852114079834 9 0.1563086340807314 0.8219099378339888 >10 0.7328230198549915 7.748412919260142 >50 0.07063742387663272 2.8862125922495445 >100 0.060855416632526485 6.851533061695204 >500 0.0032601116028224287 1.3133681714539693 >1k 6.520223205644857E-4 0.6115422134508669 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2044 0.2574728859888899 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1570 0.1977653772028166 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1202 0.15141018050814364 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 999 0.12583924320102788 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 925 0.11651781777872951 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 843 0.10618867068915565 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 1.2596520840943732E-4 0.0 20-21 0.0 0.0 0.0 1.2596520840943732E-4 0.0 22-23 0.0 0.0 0.0 3.77895625228312E-4 0.0 24-25 0.0 0.0 0.0 6.298260420471866E-4 0.0 26-27 0.0 0.0 0.0 8.817564588660612E-4 0.0 28-29 0.0 0.0 0.0 0.0012596520840943732 0.0 30-31 0.0 0.0 0.0 0.0032121128144406517 0.0 32-33 0.0 0.0 0.0 0.010958973131621046 0.0 34-35 0.0 0.0 0.0 0.02015443334550997 0.0 36-37 0.0 0.0 0.0 0.034892362729414136 0.0 38-39 0.0 0.0 0.0 0.06273067378789979 0.0 40-41 0.0 0.0 0.0 0.09541864537014877 0.0 42-43 0.0 0.0 0.0 0.12609117361784675 0.0 44-45 0.0 0.0 0.0 0.1623691536397647 0.0 46-47 0.0 0.0 0.0 0.2004736291836195 0.0 48-49 0.0 0.0 0.0 0.24859233879602455 0.0 50-51 0.0 0.0 0.0 0.3009938654943505 0.0 52-53 0.0 0.0 0.0 0.35805610490382556 0.0 54-55 0.0 0.0 0.0 0.41795256150251303 0.0 56-57 0.0 0.0 0.0 0.48421026112587706 0.0 58-59 0.0 0.0 0.0 0.5590965775252875 0.0 60-61 0.0 0.0 0.0 0.6422965976797208 0.0 62-63 0.0 0.0 0.0 0.730031365336894 0.0 64-65 0.0 0.0 0.0 0.8180180634108859 0.0 66-67 0.0 0.0 0.0 0.9228840994117424 0.0 68-69 0.0 0.0 0.0 1.046392986257196 0.0 70-71 0.0 0.0 0.0 1.1810497940468843 0.0 72-73 0.0 0.0 0.0 1.3187297668383993 0.0 74-75 0.0 0.0 0.0 1.459369922027536 0.0 76-77 0.0 0.0 0.0 1.618086084623427 0.0 78-79 0.0 0.0 0.0 1.7954450980639147 0.0 80-81 0.0 0.0 0.0 1.9960446924559436 0.0 82-83 0.0 0.0 0.0 2.2168617027976874 0.0 84-85 0.0 0.0 0.0 2.4479448776248 0.0 86-87 0.0 0.0 0.0 2.6927582601685414 0.0 88-89 0.0 0.0 0.0 2.965346971166564 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 985 0.0 45.386093 1 GGTATCA 520 0.0 40.242085 1 AAACCGT 170 0.0 36.30896 6 ATCAACG 1240 0.0 35.2278 3 TCAACGC 1285 0.0 33.62464 4 CGTCCGA 30 0.0039396756 31.685898 16-17 CCGTGCG 185 9.094947E-12 30.821747 9 ACCGTGC 205 1.8189894E-12 30.11366 8 AACCGTG 205 1.8189894E-12 30.109867 7 TCGCACC 825 0.0 29.976475 1 CGCACCA 865 0.0 28.543459 2 ACGCAGA 1660 0.0 26.8868 7 CTGTGCG 990 0.0 26.878223 9 CGCAGAG 1630 0.0 26.802439 8 CAACGCA 1660 0.0 26.314741 5 TATCAAC 1715 0.0 26.3014 2 GTACATG 2660 0.0 25.924927 1 AACGCAG 1725 0.0 25.873676 6 TACATGG 2615 0.0 24.512152 2 TGTTCCG 550 0.0 24.172121 5 >>END_MODULE