##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224482_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793870 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.16747074458035 34.0 33.0 34.0 31.0 34.0 2 33.30067643316916 34.0 34.0 34.0 31.0 34.0 3 33.41753309735851 34.0 34.0 34.0 31.0 34.0 4 36.62492095683172 37.0 37.0 37.0 35.0 37.0 5 36.653447037928125 37.0 37.0 37.0 35.0 37.0 6 36.69104387368209 37.0 37.0 37.0 36.0 37.0 7 36.66992832579641 37.0 37.0 37.0 36.0 37.0 8 36.651232569564286 37.0 37.0 37.0 35.0 37.0 9 38.492979958935344 39.0 39.0 39.0 37.0 39.0 10-11 38.5211728620555 39.0 39.0 39.0 37.5 39.0 12-13 38.51911333089801 39.0 39.0 39.0 37.0 39.0 14-15 40.133547054303605 41.0 40.0 41.0 38.0 41.0 16-17 40.14561955987756 41.0 40.0 41.0 38.0 41.0 18-19 40.12876226586217 41.0 40.0 41.0 38.0 41.0 20-21 40.12833335432754 41.0 40.0 41.0 38.0 41.0 22-23 40.054570017761094 41.0 40.0 41.0 38.0 41.0 24-25 40.028850441508055 41.0 40.0 41.0 38.0 41.0 26-27 39.97469862823888 41.0 40.0 41.0 38.0 41.0 28-29 39.9425119981861 41.0 40.0 41.0 38.0 41.0 30-31 39.89300893093328 41.0 40.0 41.0 38.0 41.0 32-33 39.85479549548415 41.0 40.0 41.0 38.0 41.0 34-35 39.78217151422777 41.0 40.0 41.0 38.0 41.0 36-37 39.68866754002544 41.0 40.0 41.0 37.0 41.0 38-39 39.59815397987076 41.0 40.0 41.0 37.0 41.0 40-41 39.477801781148045 41.0 39.5 41.0 36.5 41.0 42-43 39.389735095166714 41.0 39.0 41.0 36.0 41.0 44-45 39.17360902918614 41.0 39.0 41.0 35.0 41.0 46-47 38.969981861009984 41.0 39.0 41.0 35.0 41.0 48-49 38.890577172584926 40.5 39.0 41.0 35.0 41.0 50-51 38.759175305780545 40.0 38.0 41.0 35.0 41.0 52-53 38.53977477420736 40.0 37.5 41.0 35.0 41.0 54-55 38.365021980928866 40.0 37.0 41.0 35.0 41.0 56-57 38.151971355511606 40.0 36.5 41.0 35.0 41.0 58-59 37.89516230617103 40.0 36.0 41.0 34.0 41.0 60-61 37.653304067416585 39.0 35.0 41.0 34.0 41.0 62-63 37.430593170166404 39.0 35.0 41.0 34.0 41.0 64-65 37.15940141332963 38.5 35.0 41.0 33.5 41.0 66-67 36.869322433143964 37.5 35.0 40.5 33.0 41.0 68-69 36.585027775328456 37.0 35.0 40.0 33.0 41.0 70-71 36.275427966795576 36.5 35.0 39.5 33.0 41.0 72-73 35.96117689294216 36.0 35.0 39.0 33.0 41.0 74-75 35.630248655321395 35.5 35.0 39.0 32.5 41.0 76-77 33.792432640104806 34.5 32.5 36.5 29.5 39.0 78-79 35.050598964565985 35.0 35.0 37.0 32.5 39.0 80-81 34.953345006109316 35.0 35.0 37.0 33.0 39.0 82-83 34.72777280915011 35.0 35.0 36.0 33.0 38.5 84-85 34.51061319863454 35.0 35.0 36.0 33.0 37.0 86-87 34.30233539496391 35.0 35.0 36.0 32.0 37.0 88-89 34.13246753246753 35.0 35.0 35.0 32.0 36.5 90-91 33.98989255167723 35.0 35.0 35.0 32.0 36.0 92-93 33.89055764797763 35.0 34.5 35.0 32.0 36.0 94-95 33.78316286041795 35.0 34.0 35.0 32.0 36.0 96-97 33.733011072341824 35.0 34.0 35.0 32.0 36.0 98-99 33.686856790154565 35.0 34.0 35.0 31.0 35.0 100-101 32.870631211659344 34.5 33.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 14.0 15 27.0 16 100.0 17 178.0 18 333.0 19 512.0 20 728.0 21 1063.0 22 1416.0 23 1489.0 24 1561.0 25 1984.0 26 2445.0 27 3345.0 28 4187.0 29 5121.0 30 5760.0 31 6472.0 32 7994.0 33 11064.0 34 18098.0 35 35686.0 36 95088.0 37 209537.0 38 278993.0 39 100641.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.689954425163485 18.94551396037862 13.583731264135352 23.780800350322544 2 15.71768677491277 19.91749278849182 39.697809465025756 24.667010971569653 3 19.731316210462673 25.327068663635107 28.246690264149045 26.694924861753183 4 12.824139972539584 16.714449469056646 38.59019738748158 31.871213170922193 5 14.055827780367064 37.663345384004934 34.54507664982931 13.73575018579868 6 31.10181767795735 36.35544862508975 18.93017748497865 13.612556211974253 7 28.13055034199554 30.585108393061837 22.170128610477786 19.114212654464836 8 25.700807436985905 34.75808381724968 20.43017118671823 19.110937559046192 9 25.916711804199682 16.392734326778942 20.157708440928616 37.532845428092756 10-11 25.825575975915456 25.314661090606776 27.9552067718896 20.904556161588168 12-13 26.42246211596357 22.966228727625428 27.893042941539548 22.718266214871452 14-15 23.34557295275045 25.100709184123343 25.2095431241891 26.344174738937102 16-17 23.332913449305302 27.631098290652123 26.0571630115762 22.97882524846637 18-19 23.178732034212153 27.08107120813231 27.072631539168885 22.667565218486654 20-21 24.151268295079365 25.936908350454296 26.908614984235275 23.00320837023106 22-23 24.000576929375278 26.233847866998882 26.480743407511163 23.284831796114673 24-25 23.80353144573874 26.03312265585882 26.52753765584307 23.63580824255937 26-27 23.684220471250686 26.932713564990646 26.40622539664544 22.97684056711323 28-29 23.311504713508025 26.755228255728042 26.854493153808313 23.078773876955616 30-31 23.54670625380656 26.14231341652595 26.8171800965031 23.493800233164393 32-33 23.390019883645717 26.38579311309115 27.005291178576808 23.21889582468633 34-35 23.97314545143053 26.157990607584473 26.44526801640649 23.4235959245785 36-37 23.22931080852125 26.165442989580534 27.00117969315381 23.604066508744403 38-39 23.381787950168164 26.373902528121736 26.52336024789953 23.720949273810575 40-41 23.718933830476022 26.295363220678446 26.712874903951526 23.272828044894002 42-43 23.60613198634537 26.276972300250673 26.84652399007394 23.270371723330015 44-45 23.79981456146053 26.06431895428789 26.651436014885476 23.484430469366107 46-47 23.6778143090546 25.903329668999735 26.577974665671583 23.84088135627408 48-49 23.298589744962452 25.913585899842985 26.997840308818834 23.789984046375732 50-51 23.652676130852658 26.093692922014938 26.582123017622532 23.67150792950987 52-53 23.664642825651555 26.3400808696638 26.322256792673866 23.673019512010782 54-55 23.86769874160757 25.786526761308526 26.55056873291597 23.79520576416794 56-57 23.801710155425727 26.073728800214163 26.46155299749618 23.66300804686393 58-59 23.945824792580208 26.185649770415736 26.565045094546374 23.303480342457682 60-61 23.702461822658545 26.37144200030494 26.43085487758931 23.495241299447205 62-63 23.585851587791453 25.96042173151775 26.72666809427236 23.72705858641843 64-65 23.784372756244725 25.822804741330447 26.454142365878546 23.938680136546285 66-67 23.521987227127866 26.0945116958696 26.341214556539484 24.042286520463048 68-69 23.82953128345951 26.03656770000126 26.665323037776968 23.468577978762266 70-71 23.941073475506062 25.939196593900764 26.495584919445246 23.62414501114792 72-73 23.550392381624196 26.073601471273633 26.61600765868467 23.7599984884175 74-75 23.72888508194037 25.8088855858012 26.52581656946351 23.936412762794916 76-77 23.693296618581428 25.542281588374895 26.460822202179706 24.30359959086397 78-79 23.72067095408764 25.56491285533419 26.358631636631625 24.355784553946545 80-81 23.38984331942367 26.124368159987405 26.382426580584205 24.103361940004724 82-83 23.308492775201767 26.165219943491508 26.668518371557816 23.857768909748913 84-85 23.61352201812442 25.721172620382294 26.764259062840907 23.901046298652386 86-87 23.27629208812526 26.459621852444354 26.47480066005769 23.78928539937269 88-89 23.624522906773148 25.78658974391273 26.017358005718823 24.5715293435953 90-91 23.552344842354543 25.896242457833146 26.1813017244637 24.37011097534861 92-93 23.617846750727452 25.953493645055236 26.59383778200461 23.834821822212703 94-95 23.47349062189023 25.849761295930062 26.36873795457695 24.308010127602756 96-97 23.619925176666204 26.164107473515813 26.400796100117148 23.815171249700835 98-99 22.67770541776361 26.321438018819205 26.624951188481745 24.375905374935442 100-101 23.255824213779196 26.079015056639665 26.230785278540587 24.43437545104055 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.5 2 1.0 3 1.5 4 2.0 5 0.5 6 1.5 7 6.0 8 10.0 9 15.0 10 17.5 11 18.0 12 21.0 13 26.5 14 34.0 15 36.5 16 36.5 17 40.5 18 52.5 19 60.0 20 67.0 21 89.5 22 110.5 23 138.5 24 184.0 25 279.5 26 408.0 27 546.0 28 779.5 29 1240.5 30 2223.5 31 4069.0 32 6880.0 33 10874.5 34 15359.0 35 19841.0 36 24014.0 37 26528.5 38 27263.5 39 26899.5 40 25434.5 41 23861.0 42 23085.5 43 23064.0 44 23880.0 45 25090.5 46 26294.0 47 27699.5 48 29229.5 49 31854.0 50 34646.5 51 34069.0 52 32168.5 53 32788.0 54 34420.5 55 33710.0 56 29295.0 57 25177.5 58 23380.0 59 21539.5 60 17685.0 61 13216.5 62 10470.5 63 7506.0 64 4577.5 65 2963.0 66 2237.0 67 1861.5 68 1452.0 69 985.0 70 630.0 71 421.0 72 303.0 73 232.0 74 163.0 75 113.5 76 68.0 77 39.0 78 26.5 79 15.5 80 14.0 81 11.0 82 6.0 83 4.0 84 2.0 85 0.5 86 0.5 87 0.5 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47123584465970497 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0011336868756849359 22-23 0.0015115825009132478 24-25 3.149130210235933E-4 26-27 0.0031491302102359332 28-29 0.004345799690125588 30-31 0.0011966694798896545 32-33 1.8894781261415597E-4 34-35 0.004786677919558618 36-37 0.0024563215639840275 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.009573355839117236 46-47 0.08036580296522101 48-49 8.187738546613425E-4 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.010392129693778578 58-59 0.046670109715696524 60-61 0.03413657147895751 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 2.519304168188746E-4 78-79 0.009447390630707798 80-81 0.007242999483542646 82-83 8.817564588660612E-4 84-85 0.0030231650018264955 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0712333253555368 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 793870.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.268385045617485 #Duplication Level Percentage of deduplicated Percentage of total 1 75.61402935405141 42.546793185443875 2 14.382749975720094 16.185882272973277 3 4.683506079468803 7.905999703291229 4 1.98278375166046 4.46272158402499 5 1.0204882757894107 2.8710613618328424 6 0.5853171324465423 1.976090986937924 7 0.34994663837813533 1.3783652535576265 8 0.24620338975665695 1.1082773707491047 9 0.17253736362481464 0.8737558930077111 >10 0.8139502233957031 8.287665302553867 >50 0.07323675125070829 2.8847546893116927 >100 0.07032391143051885 7.51630824529791 >500 0.004479230024301476 1.7344066518007406 >1k 4.479230024301476E-4 0.26791749921734903 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1118 0.14082910300175092 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1008 0.12697293007671281 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 997 0.125587312784209 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 994 0.12520941715898068 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 982 0.12369783465806744 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 813 0.10240971443687254 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 1.2596520840943732E-4 0.0 16-17 0.0 0.0 0.0 1.2596520840943732E-4 0.0 18-19 0.0 0.0 0.0 2.5193041681887464E-4 0.0 20-21 0.0 0.0 0.0 2.5193041681887464E-4 0.0 22-23 0.0 0.0 0.0 4.4087822943303064E-4 0.0 24-25 0.0 0.0 0.0 5.668434378424679E-4 0.0 26-27 0.0 0.0 0.0 8.817564588660612E-4 0.0 28-29 0.0 0.0 0.0 0.0013226346882990918 0.0 30-31 0.0 0.0 0.0 0.0032750954186453705 0.0 32-33 0.0 0.0 0.0 0.010958973131621048 0.0 34-35 0.0 0.0 0.0 0.020406363762328843 0.0 36-37 0.0 0.0 0.0 0.03533324095884716 0.0 38-39 0.0 0.0 0.0 0.06304558680892337 0.0 40-41 0.0 0.0 0.0 0.09611145401640067 0.0 42-43 0.0 0.0 0.0 0.12728784309773641 0.0 44-45 0.0 0.0 0.0 0.16432161437011097 0.0 46-47 0.0 0.0 0.0 0.20267802033078464 0.0 48-49 0.0 0.0 0.0 0.2508597125473944 0.0 50-51 0.0 0.0 0.0 0.3031982566415156 0.0 52-53 0.0 0.0 0.0 0.36038646125940016 0.0 54-55 0.0 0.0 0.0 0.42135362212956784 0.0 56-57 0.0 0.0 0.0 0.48861904342020734 0.0 58-59 0.0 0.0 0.0 0.5643241336742791 0.0 60-61 0.0 0.0 0.0 0.6479650320581456 0.0 62-63 0.0 0.0 0.0 0.7361406779447517 0.0 64-65 0.0 0.0 0.0 0.824694219456586 0.0 66-67 0.0 0.0 0.0 0.9302530641036946 0.0 68-69 0.0 0.0 0.0 1.0553365160542658 0.0 70-71 0.0 0.0 0.0 1.1913159585322535 0.0 72-73 0.0 0.0 0.0 1.3306334790330911 0.0 74-75 0.0 0.0 0.0 1.4742967992240543 0.0 76-77 0.0 0.0 0.0 1.6358471790091578 0.0 78-79 0.0 0.0 0.0 1.8150326879715823 0.0 80-81 0.0 0.0 0.0 2.0172698300729337 0.0 82-83 0.0 0.0 0.0 2.240858074999685 0.0 84-85 0.0 0.0 0.0 2.4735787975361205 0.0 86-87 0.0 0.0 0.0 2.723745701437263 0.0 88-89 0.0 0.0 0.0 3.000239333895978 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 645 0.0 43.640526 1 GTATCAA 1230 0.0 39.951202 1 AACCGTG 175 0.0 37.991486 7 AAACCGT 150 2.5465852E-11 34.825527 6 ATCAACG 1355 0.0 34.69702 3 CCGTGCG 160 5.2750693E-11 32.648933 9 ACCGTGC 205 0.0 32.431755 8 TCAACGC 1445 0.0 32.207314 4 GTCTAAT 375 0.0 31.805809 1 TATAACG 120 1.5077785E-7 31.65957 2 CAACGCA 1615 0.0 29.111122 5 AACGCAG 1675 0.0 28.068336 6 ATAACGC 120 5.3883086E-6 27.702126 3 CGCAGAG 1760 0.0 27.252415 8 GTTATTA 350 0.0 27.136774 8 ATACCGT 145 7.8978337E-7 26.201025 6 ACGCAGA 1810 0.0 25.71247 7 TATCAAC 1970 0.0 24.106274 2 TCGCACC 575 0.0 24.061785 1 GTTCCGG 600 0.0 22.953188 6 >>END_MODULE