##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224481_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1059117 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28835435556223 34.0 31.0 34.0 31.0 34.0 2 32.46157884350832 34.0 31.0 34.0 31.0 34.0 3 32.6016219171253 34.0 31.0 34.0 31.0 34.0 4 35.88057882179211 37.0 37.0 37.0 35.0 37.0 5 35.90203254220261 37.0 37.0 37.0 35.0 37.0 6 35.99851196798843 37.0 37.0 37.0 35.0 37.0 7 35.96095426662021 37.0 37.0 37.0 35.0 37.0 8 35.99971296844447 37.0 37.0 37.0 35.0 37.0 9 37.731463096145184 39.0 39.0 39.0 35.0 39.0 10-11 37.80637266704245 39.0 39.0 39.0 36.0 39.0 12-13 37.812531571110654 39.0 39.0 39.0 36.0 39.0 14-15 39.32894996492361 41.0 40.0 41.0 37.0 41.0 16-17 39.16721051592978 41.0 40.0 41.0 36.5 41.0 18-19 39.25447660645614 41.0 40.0 41.0 36.5 41.0 20-21 39.32510666904601 41.0 40.0 41.0 37.0 41.0 22-23 39.28648298535478 41.0 40.0 41.0 37.0 41.0 24-25 39.22778314388306 41.0 40.0 41.0 36.0 41.0 26-27 39.07434589379643 41.0 39.5 41.0 36.0 41.0 28-29 39.002736241605035 41.0 39.0 41.0 35.5 41.0 30-31 38.93788740998398 41.0 39.0 41.0 35.0 41.0 32-33 38.75474050553433 41.0 39.0 41.0 35.0 41.0 34-35 38.76507600199034 41.0 39.0 41.0 35.0 41.0 36-37 38.76503020912703 41.0 39.0 41.0 35.0 41.0 38-39 38.668800047586814 41.0 39.0 41.0 35.0 41.0 40-41 38.59001177395887 41.0 39.0 41.0 35.0 41.0 42-43 38.45976837308815 40.0 38.5 41.0 34.5 41.0 44-45 38.30679660509651 40.0 38.0 41.0 34.0 41.0 46-47 38.164457279035275 40.0 38.0 41.0 34.0 41.0 48-49 37.98346358334348 40.0 38.0 41.0 33.0 41.0 50-51 36.7237467626334 39.0 36.0 40.0 31.5 40.5 52-53 37.059315448623714 39.5 36.5 40.0 32.5 40.5 54-55 37.54218986193216 40.0 36.5 41.0 33.0 41.0 56-57 37.424838332308894 40.0 36.0 41.0 33.0 41.0 58-59 37.30656764078 40.0 35.5 41.0 33.0 41.0 60-61 37.088577560363966 39.5 35.0 41.0 32.5 41.0 62-63 36.83230039740651 39.0 35.0 41.0 32.0 41.0 64-65 36.60422738941968 39.0 35.0 41.0 32.0 41.0 66-67 36.386062163103794 38.0 35.0 41.0 31.0 41.0 68-69 36.105315560037276 37.0 35.0 40.5 31.0 41.0 70-71 35.821029215846785 37.0 35.0 40.0 31.0 41.0 72-73 35.513360657982076 36.0 35.0 39.5 30.5 41.0 74-75 35.22697728390725 36.0 35.0 39.0 30.0 41.0 76-77 34.86115226174256 35.5 35.0 39.0 30.0 40.5 78-79 34.591027714596216 35.0 34.5 37.5 30.0 39.5 80-81 34.25726949902607 35.0 34.0 37.0 29.5 39.0 82-83 33.94738116751974 35.0 34.0 37.0 29.0 39.0 84-85 33.67674865005472 35.0 34.0 36.0 29.0 37.0 86-87 33.41827342965885 35.0 34.0 36.0 29.0 37.0 88-89 33.22987025984853 35.0 34.0 35.5 29.0 37.0 90-91 33.03168110794181 35.0 34.0 35.0 29.0 36.0 92-93 32.87978145946104 35.0 34.0 35.0 28.5 36.0 94-95 32.7462537188998 35.0 34.0 35.0 27.0 36.0 96-97 32.6063739888983 35.0 33.5 35.0 27.0 36.0 98-99 32.556932803457975 35.0 33.0 35.0 27.0 35.0 100-101 31.429628643483202 34.5 31.0 35.0 23.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 4.0 7 157.0 8 623.0 9 479.0 10 517.0 11 895.0 12 1530.0 13 1792.0 14 1841.0 15 1939.0 16 2056.0 17 2326.0 18 2537.0 19 2849.0 20 3325.0 21 4227.0 22 5043.0 23 5069.0 24 5033.0 25 5353.0 26 5662.0 27 5843.0 28 6407.0 29 7300.0 30 9076.0 31 11206.0 32 14970.0 33 21054.0 34 33966.0 35 60778.0 36 127988.0 37 233350.0 38 337136.0 39 136766.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.07904416979509 21.206135166570526 14.46293652069484 23.251884142939545 2 14.967387897076428 21.37896132246137 39.79195857677535 23.86169220368685 3 18.24959352817544 28.092820980555445 30.101386630712085 23.556198860557032 4 12.379180015050274 18.466420612642416 41.0463622054976 28.108037166809712 5 12.953620799212928 39.15752461720471 35.39221823462375 12.496636348958614 6 27.23211883106399 39.4851560309201 20.437779773150652 12.844945364865259 7 24.83993741956743 32.82186953849291 24.592467121196243 17.74572592074341 8 24.523447362283864 35.265792164605045 22.24173533235705 17.969025140754045 9 25.922537358950898 16.47787732611222 21.89153795095348 35.70804736398339 10-11 24.52047318662622 26.205084046427352 29.2753775078674 19.999065259079025 12-13 24.98123436787437 23.99947314602636 29.067090793557277 21.952201692541994 14-15 22.588972492627736 25.68045844990734 26.318978594462255 25.41159046300267 16-17 22.330781918007297 28.455123610804673 27.080042880029936 22.134051591158098 18-19 22.17257070107969 28.081248630556168 27.841359848284515 21.904820820079635 20-21 23.49369793243443 26.64551100187454 27.388053110510878 22.472737955180154 22-23 23.45036524936779 27.120196638940502 26.878791443390483 22.55064666830123 24-25 22.69663685324373 27.101789655299413 27.33381873401082 22.867754757446036 26-27 22.654343193433775 27.716106907924242 27.39121362417939 22.238336274462593 28-29 22.546564732697146 27.69939487327651 27.37195229611082 22.382088097915528 30-31 22.638622550671926 27.065848249060302 27.51759248506067 22.7779367152071 32-33 22.62158005206224 27.18339900124349 27.60455171619377 22.590469230500503 34-35 22.99240782651964 26.9951289612007 27.42539303967361 22.587070172606047 36-37 22.547028952589983 26.984310618216227 27.787667785155673 22.68099264403812 38-39 22.398583652994983 27.33403363824137 27.26085570964886 23.006526999114783 40-41 23.07115231357856 26.8637422902747 27.541376627398844 22.5237287687479 42-43 22.8636714499175 27.231010006349866 27.52315104418704 22.382167499545595 44-45 22.80820785941255 26.82540357039996 27.361294069321097 23.005094500866395 46-47 22.96422397147813 26.785189927080765 26.972657411787367 23.27792868965374 48-49 22.481793796152832 27.02317118882994 27.31152460020942 23.183510414807806 50-51 22.50799486742258 27.320777591144317 27.03105511477958 23.140172426653525 52-53 23.00784521445695 27.076753559805006 26.66272942460559 23.25267180113245 54-55 22.94534031650894 26.626708852751868 27.018922366461872 23.409028464277316 56-57 22.79143852851007 27.072504737436944 27.04101624277582 23.095040491277167 58-59 23.124241870514673 27.00798960468431 27.106153945672958 22.76161457912806 60-61 22.921594060354973 27.16531064477578 26.935217393973193 22.977877900896058 62-63 22.6414470623959 27.03773543027609 27.409531446349312 22.911286060978703 64-65 23.32324914095434 26.707900858455254 26.707759160201682 23.261090840388725 66-67 22.63193755521548 26.9526153782228 26.777247939999217 23.6381991265625 68-69 22.626442593216805 27.02826977567162 27.595818025770523 22.74946960534105 70-71 23.090413995809715 26.668064057134387 27.287872822360516 22.95364912469538 72-73 22.943027068775216 26.71409296612178 27.4362511412809 22.90662882382211 74-75 22.93891987381942 26.49268211160807 27.348347727399336 23.220050287173184 76-77 22.78218553757517 26.410585421629527 26.95009144409919 23.857137596696116 78-79 22.755953063919744 26.11609177003757 27.510424442798126 23.61753072324456 80-81 22.678851063930296 26.824270223414732 27.150452427234917 23.34642628542006 82-83 22.54920993451901 27.055414875894083 27.369145478514746 23.02622971107216 84-85 22.648500415337892 26.405431174568005 27.677937695065957 23.26813071502815 86-87 22.644854453502685 27.007470294078466 27.245457783438 23.10221746898085 88-89 22.81313784365044 26.51677508139369 27.019966129646196 23.650120945309673 90-91 22.475751026562694 26.569113705095848 27.217389580188023 23.73774568815343 92-93 22.590743681792343 26.45645001992292 27.60305623171766 23.349750066567086 94-95 22.846862055844632 26.298888602486787 27.410805416209914 23.44344392545866 96-97 22.83340745167909 26.81006914250267 27.45589014244885 22.90063326336939 98-99 22.259098099958596 26.868068757827928 27.504877923272264 23.367955218941212 100-101 22.854559916266293 26.354296359132963 27.186154465262412 23.60498925933833 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 2.0 2 2.5 3 2.5 4 2.5 5 5.5 6 6.5 7 10.5 8 18.0 9 18.5 10 19.5 11 28.5 12 36.5 13 40.0 14 48.0 15 55.0 16 58.5 17 73.0 18 82.0 19 79.0 20 90.5 21 122.5 22 186.0 23 228.5 24 281.0 25 408.5 26 549.5 27 762.5 28 1162.5 29 1975.5 30 3663.5 31 6853.5 32 12284.5 33 20177.0 34 29285.5 35 37331.5 36 44877.0 37 49919.5 38 50777.0 39 48455.5 40 43639.5 41 38566.0 42 34132.5 43 31352.0 44 29925.5 45 30527.0 46 32737.5 47 32993.5 48 34009.0 49 37134.0 50 39580.0 51 38545.5 52 36804.0 53 37017.5 54 37868.5 55 37654.0 56 32075.5 57 26465.0 58 24376.0 59 22685.0 60 18720.5 61 13947.0 62 11066.5 63 8079.0 64 5090.0 65 3356.5 66 2700.5 67 2343.0 68 1793.5 69 1179.5 70 761.5 71 521.0 72 373.5 73 293.0 74 216.5 75 170.0 76 121.5 77 78.5 78 57.5 79 36.5 80 20.0 81 17.0 82 14.0 83 10.0 84 6.0 85 6.5 86 7.5 87 5.0 88 6.0 89 6.5 90 6.0 91 6.0 92 4.5 93 4.0 94 5.5 95 5.0 96 4.0 97 2.0 98 2.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1517301676774143 2 9.441827484593298E-5 3 2.832548245377989E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.039561257160445916 16-17 0.07699810313685836 18-19 0.027664554529858363 20-21 0.043101942467168405 22-23 0.06897254977495404 24-25 0.018694818419494733 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.023415732161791377 38-39 0.005145795979103348 40-41 0.0061371878649856436 42-43 0.003729521856414352 44-45 0.012463212279663155 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.016853662059999035 60-61 0.018742027556917694 62-63 0.031866167760502384 64-65 0.04999447653092151 66-67 0.018647609282071764 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017703426533612433 80-81 0.06226885226089279 82-83 0.053393534425375096 84-85 0.03214942258504018 86-87 0.0621272248486239 88-89 0.03531243479237894 90-91 0.0 92-93 0.0033046396196076545 94-95 0.0 96-97 0.0 98-99 8.025553361904302E-4 100-101 0.049380757744422944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1059117.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.11311325348646 #Duplication Level Percentage of deduplicated Percentage of total 1 73.3701185211723 37.50175177394405 2 14.632463788607694 14.958215576092893 3 5.209176980875917 7.987717589428963 4 2.3573131542760284 4.819584569137762 5 1.2717104190452306 3.2500539337148804 6 0.7826790031126256 2.4003096316332915 7 0.4928957495261763 1.7635405387385485 8 0.34021144858142127 1.3911413041179896 9 0.23915341441328608 1.1001488000277848 >10 1.125725156142264 10.034272847154146 >50 0.08975254269277476 3.2468862558846094 >100 0.08115109783984449 8.431077152967053 >500 0.006529398292785182 2.3351162304513 >1k 0.0011193254216203168 0.7801837967067882 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1829 0.17269102469321143 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1398 0.1319967482346143 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1358 0.128220017240777 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1280 0.12085539180279421 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1263 0.11925028113041335 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 9.441827484593298E-5 0.0 0.0 9.441827484593298E-5 8 0.0 9.441827484593298E-5 0.0 0.0 9.441827484593298E-5 9 0.0 9.441827484593298E-5 0.0 0.0 9.441827484593298E-5 10-11 0.0 9.441827484593298E-5 0.0 0.0 9.441827484593298E-5 12-13 0.0 9.441827484593298E-5 0.0 0.0 2.832548245377989E-4 14-15 0.0 9.441827484593298E-5 0.0 0.0 4.248822368066984E-4 16-17 0.0 9.441827484593298E-5 0.0 9.441827484593298E-5 5.665096490755978E-4 18-19 0.0 9.441827484593298E-5 0.0 9.441827484593298E-5 5.665096490755978E-4 20-21 0.0 9.441827484593298E-5 0.0 1.4162741226889946E-4 6.609279239215308E-4 22-23 0.0 9.441827484593298E-5 0.0 2.3604568711483242E-4 7.553461987674638E-4 24-25 0.0 9.441827484593298E-5 0.0 3.776730993837319E-4 7.553461987674638E-4 26-27 0.0 9.441827484593298E-5 0.0 8.969736110363633E-4 8.497644736133968E-4 28-29 0.0 9.441827484593298E-5 0.0 0.001652319809803827 9.441827484593298E-4 30-31 0.0 9.441827484593298E-5 0.0 0.0049569594294114816 9.441827484593298E-4 32-33 0.0 9.441827484593298E-5 0.0 0.011849493493164588 0.0010386010233052628 34-35 0.0 9.441827484593298E-5 0.0 0.021857830626833483 0.0011330192981511957 36-37 0.0 9.441827484593298E-5 0.0 0.03923079319848516 0.0011330192981511957 38-39 0.0 9.441827484593298E-5 0.0 0.07397671834178848 0.0011330192981511957 40-41 0.0 9.441827484593298E-5 0.0 0.11264100189119805 0.0011330192981511957 42-43 0.0 9.441827484593298E-5 0.0 0.15187179508968318 0.0011330192981511957 44-45 0.0 9.441827484593298E-5 0.0 0.19469048273231382 0.0012274375729971285 46-47 0.0 9.441827484593298E-5 0.0 0.24888657249387935 0.0013218558478430616 48-49 0.0 9.441827484593298E-5 0.0 0.3067649749744362 0.0013218558478430616 50-51 0.0 9.441827484593298E-5 0.0 0.37191358461813 0.0013218558478430616 52-53 0.0 9.441827484593298E-5 0.0 0.4407917161182381 0.0014162741226889947 54-55 0.0 1.8883654969186595E-4 0.0 0.514154715673528 0.0014162741226889947 56-57 0.0 1.8883654969186595E-4 0.0 0.6032383579906658 0.0014162741226889947 58-59 0.0 1.8883654969186595E-4 0.0 0.7018110369298198 0.0014162741226889947 60-61 0.0 1.8883654969186595E-4 0.0 0.8146880845081328 0.0015106923975349276 62-63 0.0 1.8883654969186595E-4 0.0 0.9413974093513748 0.0015106923975349276 64-65 0.0 1.8883654969186595E-4 0.0 1.0632441930400514 0.0016051106723808607 66-67 0.0 2.832548245377989E-4 0.0 1.199064881405926 0.001652319809803827 68-69 0.0 2.832548245377989E-4 0.0 1.3605201313924713 0.0016995289472267936 70-71 0.0 2.832548245377989E-4 0.0 1.5333055743605286 0.0016995289472267936 72-73 0.0 2.832548245377989E-4 0.0 1.7188846935702098 0.0018883654969186596 74-75 0.0 2.832548245377989E-4 0.0 1.9075796158498068 0.002124411184033492 76-77 0.0 2.832548245377989E-4 0.0 2.1103900702188714 0.0021716203214564586 78-79 0.0 2.832548245377989E-4 0.0 2.343603209088325 0.0021716203214564586 80-81 0.0 2.832548245377989E-4 0.0 2.612978547223772 0.0021716203214564586 82-83 0.0 2.832548245377989E-4 0.0 2.9012375403284056 0.0022660385963023913 84-85 0.0 2.832548245377989E-4 0.0 3.1849172471030114 0.0022660385963023913 86-87 0.0 2.832548245377989E-4 0.0 3.4898410657179517 0.002407666008571291 88-89 0.0 2.832548245377989E-4 0.0 3.8312575475608455 0.0025492934208401906 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 845 0.0 45.014843 1 GTATCAA 1560 0.0 42.06074 1 AAACCGT 205 0.0 37.053734 6 ATCAACG 1710 0.0 36.64744 3 TCAACGC 1850 0.0 33.874123 4 CCGTGCG 185 0.0 33.387676 9 CGATTCG 30 0.003950879 31.668005 54-55 AACCGTG 240 0.0 31.650066 7 CCCATAA 945 0.0 30.6453 2 TATCAAC 2145 0.0 30.10076 2 CGCAGAG 2125 0.0 29.495985 8 GCCCATA 955 0.0 29.37454 1 CATAATA 970 0.0 28.876606 4 ACGCAGA 2195 0.0 28.549942 7 ACCGTGC 250 0.0 28.490438 8 CCATAAT 1045 0.0 28.167044 3 GACGTGC 95 0.0012288921 24.991613 8 GCAGAGT 2505 0.0 24.46789 9 GTACATG 3530 0.0 24.110197 1 ATAATAA 1275 0.0 23.830639 5 >>END_MODULE