##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224480_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1118808 Sequences flagged as poor quality 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40400944576728 34.0 31.0 34.0 31.0 34.0 2 32.573285139183845 34.0 31.0 34.0 31.0 34.0 3 32.71108358181207 34.0 33.0 34.0 31.0 34.0 4 35.990988623606555 37.0 37.0 37.0 35.0 37.0 5 36.02396657871592 37.0 37.0 37.0 35.0 37.0 6 36.122862010282375 37.0 37.0 37.0 35.0 37.0 7 36.081928266512215 37.0 37.0 37.0 35.0 37.0 8 36.1132374813194 37.0 37.0 37.0 35.0 37.0 9 37.8615490772322 39.0 39.0 39.0 37.0 39.0 10-11 37.94432780244689 39.0 39.0 39.0 37.0 39.0 12-13 37.971137138812026 39.0 39.0 39.0 37.0 39.0 14-15 39.51710838678308 41.0 40.0 41.0 38.0 41.0 16-17 39.36479449557029 41.0 40.0 41.0 37.5 41.0 18-19 39.473923586531384 41.0 40.0 41.0 37.5 41.0 20-21 39.55232086291839 41.0 40.0 41.0 38.0 41.0 22-23 39.51883611844034 41.0 40.0 41.0 38.0 41.0 24-25 39.48890158096832 41.0 40.0 41.0 37.0 41.0 26-27 39.36692980386268 41.0 40.0 41.0 37.0 41.0 28-29 39.30029325853945 41.0 40.0 41.0 37.0 41.0 30-31 39.22938967186506 41.0 40.0 41.0 37.0 41.0 32-33 39.0540351874495 41.0 40.0 41.0 36.0 41.0 34-35 39.07787842060479 41.0 39.0 41.0 36.0 41.0 36-37 39.10035323308378 41.0 40.0 41.0 36.0 41.0 38-39 39.02403763648454 41.0 39.0 41.0 36.0 41.0 40-41 38.98008505480833 41.0 39.0 41.0 35.0 41.0 42-43 38.88226934380162 41.0 39.0 41.0 35.0 41.0 44-45 38.774777262944134 41.0 39.0 41.0 35.0 41.0 46-47 38.67584250380763 41.0 39.0 41.0 35.0 41.0 48-49 38.55103601332847 40.5 39.0 41.0 35.0 41.0 50-51 37.38644298217388 39.0 37.5 40.0 33.0 40.5 52-53 37.761603867687754 39.5 38.0 40.5 33.5 41.0 54-55 38.33574885056238 40.0 38.0 41.0 34.0 41.0 56-57 38.29401470136074 40.0 38.0 41.0 34.0 41.0 58-59 38.23667912635591 40.0 38.0 41.0 34.0 41.0 60-61 38.08405418981631 40.0 37.5 41.0 34.0 41.0 62-63 37.86932923254035 40.0 37.0 41.0 33.5 41.0 64-65 37.707849336079114 40.0 37.0 41.0 33.0 41.0 66-67 37.52248330365889 40.0 36.0 41.0 33.0 41.0 68-69 37.278296633560004 39.0 36.0 41.0 33.0 41.0 70-71 37.0212954322815 39.0 35.0 41.0 32.5 41.0 72-73 36.73210372110317 39.0 35.0 41.0 32.0 41.0 74-75 36.42928143166656 38.0 35.0 40.0 32.0 41.0 76-77 36.03336765557629 37.0 35.0 39.5 31.0 41.0 78-79 35.70480279011234 37.0 35.0 39.0 31.0 41.0 80-81 35.28785412689219 36.0 35.0 39.0 31.0 39.5 82-83 34.90478884670113 36.0 35.0 37.5 31.0 39.0 84-85 34.545384015845435 35.5 35.0 37.0 31.0 39.0 86-87 34.196693266404964 35.0 34.5 37.0 30.5 38.0 88-89 33.9209663320248 35.0 34.0 36.0 30.0 37.0 90-91 33.67174037010818 35.0 34.0 36.0 30.0 37.0 92-93 33.45464547983211 35.0 34.0 36.0 29.5 36.5 94-95 33.28153311381399 35.0 34.0 35.0 29.0 36.0 96-97 33.12928268299834 35.0 34.0 35.0 29.0 36.0 98-99 33.033703727538594 35.0 34.0 35.0 29.0 36.0 100-101 32.0194698286033 34.5 32.5 35.0 26.5 35.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 6.0 7 124.0 8 438.0 9 361.0 10 387.0 11 756.0 12 1228.0 13 1462.0 14 1570.0 15 1719.0 16 1732.0 17 1953.0 18 2183.0 19 2730.0 20 3235.0 21 3873.0 22 4389.0 23 4276.0 24 4053.0 25 4295.0 26 4543.0 27 5050.0 28 5688.0 29 6495.0 30 7882.0 31 9675.0 32 12612.0 33 17608.0 34 26391.0 35 44443.0 36 87055.0 37 182585.0 38 418424.0 39 249526.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.976998261486095 23.975019829084925 15.634002538839045 21.41397937058993 2 12.890594275335893 22.830995130531782 43.83576091697592 20.442649677156403 3 16.16544780775219 30.15920543865514 32.215057838445624 21.46028891514704 4 10.5817977704843 19.808045705786874 44.67227620825021 24.937880315478616 5 11.189766251224517 40.29699465860094 37.65471823583671 10.858520854337831 6 24.17349536292197 43.18015244796247 21.402153005698924 11.244199183416637 7 22.203631007286326 34.42091940708325 27.529120278010165 15.846329307620252 8 21.461591264989167 39.51607425045226 23.56597378638694 15.456360698171626 9 23.52217717427834 18.102927401305674 24.25760273433869 34.11729269007729 10-11 21.51852686073035 28.843510235893916 32.02703234156352 17.610930561812214 12-13 22.216904062180465 26.383391967165053 32.084638293612485 19.315065677041996 14-15 19.817423742513736 28.5546441198088 28.944180074428953 22.683752063248512 16-17 19.50911349899862 31.651351527831572 29.35318621378103 19.48634875938878 18-19 19.601524345950537 30.793576289938645 30.679809121489477 18.92509024262134 20-21 20.64234436872321 29.61586935829496 30.459562760175313 19.282223512806514 22-23 20.347264706829378 29.89807271933685 30.001914043353977 19.7527485304798 24-25 20.00761656836049 29.981655870568403 29.90866375711371 20.1020638039574 26-27 19.95427276172498 30.043850240613224 30.077055223058828 19.92482177460297 28-29 19.93536871384545 29.891724049166612 30.27918999506618 19.89371724192176 30-31 20.221029881802778 29.601415077475313 30.163799329286167 20.013755711435742 32-33 20.091070138933578 29.616386368349172 30.259570900458343 20.032972592258904 34-35 20.11596270316265 29.88171339497036 30.037012606273823 19.965311295593168 36-37 20.317513389899755 29.2113480909056 30.232297215991533 20.238841303203117 38-39 20.084907793836475 29.844209081084756 30.031428129606176 20.039454995472596 40-41 20.296306426736137 29.31207013601456 30.390783206650696 20.00084023059861 42-43 20.346067865663066 29.53080573380206 30.10791325108222 20.015213149452656 44-45 20.510969654332754 29.56599626165551 29.729180093986017 20.19385399002572 46-47 20.479519274084563 29.204608833687278 29.743977518930866 20.571894373297294 48-49 20.20851656405746 29.416754259890883 29.88265189380126 20.492077282250396 50-51 20.163334548912772 29.619738149888097 29.46519867573346 20.751728625465674 52-53 20.319706330308684 29.538982560010297 29.61415184732322 20.527159262357795 54-55 20.283685851370386 29.49245983225004 29.565349908116495 20.658504408263077 56-57 20.478053641935723 29.672307345097348 29.36514994760046 20.484489065366475 58-59 20.39383083287332 29.362678818462808 29.553224822382784 20.69026552628109 60-61 20.7390766213257 29.515326544779025 29.454938478819702 20.290658355075568 62-63 20.338817117345467 29.59683212790221 29.589232525048516 20.475118229703806 64-65 20.526935634015544 29.427190222100606 29.36933335837185 20.676540785512 66-67 20.35205472532964 29.520487357238416 29.253100626718382 20.87435729071356 68-69 20.399434040514546 29.40607324938685 29.700046835560705 20.4944458745379 70-71 20.496099420097103 29.085955767209388 29.740804499074013 20.677140313619493 72-73 20.439163824355923 29.256315650227744 29.63225146763341 20.672269057782927 74-75 20.291730127063804 29.161125054522312 29.56208750741861 20.985057310995273 76-77 20.27707166913358 29.29327462799694 29.54514983804192 20.88450386482757 78-79 20.328021412173612 29.310281633733116 29.306169409341543 21.05552754475173 80-81 20.3524330328496 29.20296760293755 29.49930755633343 20.945291807879414 82-83 20.306342778216717 29.452448949204747 29.45204652554116 20.78916174703738 84-85 20.452662810507743 29.170863245834376 29.628228907244313 20.748245036413568 86-87 19.734681539144 29.55158085657456 29.880076341885726 20.83366126239572 88-89 20.330680633983373 28.907463695452652 29.614934633261818 21.14692103730216 90-91 20.244134829211088 29.07670485016196 29.6082080213942 21.070952299232754 92-93 20.35947545918773 29.004736455872482 29.642669755776215 20.993118329163572 94-95 20.35107900551301 28.781256480110972 29.598376128880023 21.269288385495994 96-97 20.409936289336507 28.99804971004855 29.718995573860752 20.87301842675419 98-99 20.10805322307239 29.11157976779596 29.6037586683238 21.176608340807856 100-101 20.244241483673342 28.9469483675131 29.5015955327765 21.307214616037058 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 1.0 2 1.5 3 5.0 4 5.0 5 7.0 6 15.5 7 23.0 8 32.0 9 43.0 10 40.5 11 49.0 12 75.0 13 92.0 14 97.5 15 108.5 16 132.5 17 153.0 18 190.0 19 221.0 20 243.5 21 298.0 22 359.0 23 430.5 24 558.0 25 739.5 26 1139.5 27 1998.0 28 3901.5 29 8170.0 30 15825.5 31 27751.5 32 42921.5 33 57500.0 34 69601.0 35 78213.5 36 83299.5 37 83598.5 38 77029.0 39 67112.5 40 55254.5 41 42897.5 42 34052.0 43 27834.5 44 23398.0 45 21168.0 46 20436.5 47 19932.5 48 19788.0 49 20631.5 50 21402.5 51 20436.0 52 19221.0 53 19433.0 54 19600.5 55 18954.5 56 16354.0 57 13695.0 58 12501.0 59 11366.5 60 9557.5 61 7375.0 62 5752.5 63 4229.0 64 2878.0 65 2057.0 66 1569.5 67 1281.0 68 1020.5 69 721.5 70 473.5 71 356.5 72 275.0 73 210.5 74 158.5 75 133.0 76 114.5 77 79.5 78 48.5 79 31.0 80 24.5 81 18.0 82 13.0 83 14.0 84 9.0 85 2.5 86 4.5 87 7.0 88 6.0 89 7.0 90 9.0 91 8.5 92 6.0 93 3.5 94 2.0 95 1.0 96 2.5 97 4.0 98 3.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15748904190888874 2 0.0 3 1.7876168207592365E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03807623828217174 16-17 0.07606309572330552 18-19 0.026412038526717724 20-21 0.04035544972863976 22-23 0.06757191582469914 24-25 0.017339883161364596 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0215407826901488 38-39 0.005809754667467519 40-41 0.006033206770062424 42-43 0.003485852800480511 44-45 0.011708890175973 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 4.469042051898091E-5 58-59 0.01613324180735211 60-61 0.018725286197453003 62-63 0.02936160628097046 64-65 0.047461226591157736 66-67 0.01818900115122523 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017161121479288673 80-81 0.059572330551801556 82-83 0.05215372074565072 84-85 0.030166033850312118 86-87 0.06077897190581405 88-89 0.03463507590221021 90-91 0.0 92-93 0.003485852800480511 94-95 0.0 96-97 0.0 98-99 6.703563077847137E-4 100-101 0.04732715532960079 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1118808.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.49747000159266 #Duplication Level Percentage of deduplicated Percentage of total 1 70.42803393965376 30.63441293561239 2 13.22254416214432 11.502944360752133 3 5.312198619193401 6.932016002426006 4 2.9477193572383613 5.128733372583584 5 1.817023495300114 3.9517962489502874 6 1.2379294403100642 3.230807921638524 7 0.9113204099867536 2.7748092536666555 8 0.653999785817221 2.275786885170607 9 0.5292850753371587 2.0720305518091897 >10 2.7205699096319345 20.575061364631544 >50 0.14432113543333444 4.377845807890164 >100 0.07193605517678754 5.526366399608288 >500 0.0027027994732474058 0.7695981776594035 >1k 4.1581530357652404E-4 0.24779071760126503 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 1731 0.15471823583671193 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 8.938084103796184E-5 8.938084103796184E-5 14-15 0.0 0.0 0.0 8.938084103796184E-5 8.938084103796184E-5 16-17 0.0 0.0 0.0 8.938084103796184E-5 8.938084103796184E-5 18-19 0.0 0.0 0.0 1.3407126155694276E-4 8.938084103796184E-5 20-21 0.0 0.0 0.0 3.1283294363286643E-4 8.938084103796184E-5 22-23 0.0 0.0 0.0 4.4690420518980913E-4 8.938084103796184E-5 24-25 0.0 0.0 0.0 5.36285046227771E-4 8.938084103796184E-5 26-27 0.0 0.0 0.0 6.703563077847137E-4 2.681425231138855E-4 28-29 0.0 0.0 0.0 9.8318925141758E-4 2.681425231138855E-4 30-31 0.0 0.0 0.0 0.002502663549062931 2.681425231138855E-4 32-33 0.0 0.0 0.0 0.0065694918162901945 2.681425231138855E-4 34-35 0.0 0.0 0.0 0.012915531529985484 2.681425231138855E-4 36-37 0.0 0.0 0.0 0.022658043203123326 2.681425231138855E-4 38-39 0.0 0.0 0.0 0.04048952099019671 2.681425231138855E-4 40-41 0.0 0.0 0.0 0.06448827680888947 2.681425231138855E-4 42-43 0.0 0.0 0.0 0.09094500575612616 2.681425231138855E-4 44-45 0.0 0.0 0.0 0.12053006413969153 2.681425231138855E-4 46-47 0.0 0.0 0.0 0.15628240055487624 2.681425231138855E-4 48-49 0.0 0.0 0.0 0.19873830004790813 3.5752336415184735E-4 50-51 0.0 0.0 0.0 0.24946192733695144 3.5752336415184735E-4 52-53 0.0 0.0 0.0 0.30148157682104526 4.4690420518980913E-4 54-55 0.0 0.0 0.0 0.35680831742354363 4.4690420518980913E-4 56-57 0.0 0.0 0.0 0.4258550171253691 4.4690420518980913E-4 58-59 0.0 0.0 0.0 0.5049123710234463 4.4690420518980913E-4 60-61 0.0 0.0 0.0 0.5961255193026864 4.4690420518980913E-4 62-63 0.0 0.0 0.0 0.6927908988852421 4.4690420518980913E-4 64-65 8.938084103796184E-5 0.0 0.0 0.7926292983246455 4.4690420518980913E-4 66-67 8.938084103796184E-5 0.0 0.0 0.9033721603706802 4.4690420518980913E-4 68-69 8.938084103796184E-5 0.0 0.0 1.0357004955273827 4.4690420518980913E-4 70-71 8.938084103796184E-5 0.0 0.0 1.1857262372096016 4.4690420518980913E-4 72-73 8.938084103796184E-5 0.0 0.0 1.356264881910033 4.9159462570879E-4 74-75 8.938084103796184E-5 0.0 0.0 1.5337305417909062 5.36285046227771E-4 76-77 8.938084103796184E-5 0.0 0.0 1.7110621304102223 5.36285046227771E-4 78-79 8.938084103796184E-5 0.0 0.0 1.9144482341921045 5.36285046227771E-4 80-81 8.938084103796184E-5 0.0 0.0 2.1514415342042605 5.80975466746752E-4 82-83 8.938084103796184E-5 0.0 0.0 2.421505745400462 6.256658872657329E-4 84-85 8.938084103796184E-5 0.0 0.0 2.691391194914588 6.256658872657329E-4 86-87 8.938084103796184E-5 0.0 0.0 2.983487783426647 6.703563077847137E-4 88-89 8.938084103796184E-5 0.0 0.0 3.308789354384309 7.150467283036947E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 110 0.0 51.83384 9 ATCCCGT 65 1.331044E-4 36.525 6 AAACCGT 185 0.0 35.932705 6 GTATCAA 1545 0.0 35.706142 1 ACCGTGC 215 0.0 35.33582 8 ATCAACG 1510 0.0 34.904358 3 CTATCCG 55 0.0025757763 34.555893 9 TCAACGC 1545 0.0 34.113644 4 GGTATCA 890 0.0 33.663868 1 AACCGTG 215 0.0 33.12733 7 CGCAGAG 1795 0.0 29.36244 8 ACGCAGA 1870 0.0 28.43872 7 CAACGCA 1855 0.0 28.41271 5 AACGCAG 1925 0.0 27.626184 6 TATCAAC 1980 0.0 27.33841 2 GTATTAC 350 0.0 24.457829 1 TAATACT 1380 0.0 24.085327 4 GCAGAGT 2285 0.0 23.289312 9 TGCGCGG 135 4.0017767E-11 22.88035 12-13 ACTTAAT 1185 0.0 21.671495 1 >>END_MODULE