SRR3224478_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3224478_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	135184
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC	219	0.16200142028642442	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.13980944490472244	No Hit
ATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGT	182	0.13463131731565867	No Hit
ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA	177	0.13093265475204166	No Hit
TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG	167	0.12353532962480766	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	162	0.11983666706119067	No Hit
GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT	140	0.1035625517812759	No Hit
CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG	140	0.1035625517812759	No Hit
ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT	137	0.10134335424310568	No Hit
GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA	136	0.1006036217303823	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	125	0.0	61.121197	1
AACCGTG	55	1.17543095E-8	60.436653	7
AAACCGT	65	4.3906766E-8	51.138706	6
CCGTGCG	70	7.869858E-8	47.485943	9
ACCGTGC	70	7.869858E-8	47.485943	8
CCAGACC	50	2.818595E-5	47.48594	8
GTATCAA	260	0.0	42.241207	1
CAGACCG	45	9.608894E-4	42.209724	9
GTGTACT	70	4.1295334E-6	40.929367	1
GTATTAA	95	1.8200808E-8	40.211308	1
ATCAACG	250	0.0	39.88819	3
TCCAGAC	60	8.266358E-5	39.571617	7
TCAACGC	260	0.0	38.35403	4
GCCCATA	50	0.0015695834	38.200745	1
TTCGATC	25	0.0015984263	38.073265	94-95
CGCTACG	25	0.0016145098	37.99578	38-39
TCGCTAC	25	0.0016145098	37.99578	38-39
ACCGAAC	25	0.0016159783	37.98875	12-13
TCGAGCG	25	0.0016159783	37.98875	78-79
TTCGCTA	25	0.0016159783	37.98875	36-37