##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224477_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 924727 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.263278783900546 34.0 31.0 34.0 31.0 34.0 2 32.424802130791036 34.0 31.0 34.0 31.0 34.0 3 32.56299751169805 34.0 31.0 34.0 31.0 34.0 4 35.85219097095683 37.0 37.0 37.0 35.0 37.0 5 35.87007733093118 37.0 37.0 37.0 35.0 37.0 6 35.975424098139236 37.0 37.0 37.0 35.0 37.0 7 35.937623752739995 37.0 37.0 37.0 35.0 37.0 8 35.975452214545484 37.0 37.0 37.0 35.0 37.0 9 37.71297474822299 39.0 39.0 39.0 35.0 39.0 10-11 37.7875724402986 39.0 39.0 39.0 36.0 39.0 12-13 37.78071257787434 39.0 39.0 39.0 35.0 39.0 14-15 39.27455886980698 41.0 40.0 41.0 37.0 41.0 16-17 39.11263107922663 41.0 40.0 41.0 36.5 41.0 18-19 39.203817991688354 41.0 40.0 41.0 36.5 41.0 20-21 39.273659685507184 41.0 40.0 41.0 37.0 41.0 22-23 39.225830974979644 41.0 40.0 41.0 36.0 41.0 24-25 39.17178745727117 41.0 40.0 41.0 36.0 41.0 26-27 39.01045984382418 41.0 39.0 41.0 35.5 41.0 28-29 38.9455450095001 41.0 39.0 41.0 35.0 41.0 30-31 38.883047645413185 41.0 39.0 41.0 35.0 41.0 32-33 38.697580475102384 41.0 39.0 41.0 35.0 41.0 34-35 38.705342225327044 41.0 39.0 41.0 35.0 41.0 36-37 38.703630368746666 41.0 39.0 41.0 35.0 41.0 38-39 38.57933855072903 40.5 39.0 41.0 35.0 41.0 40-41 38.48839224982076 40.0 39.0 41.0 35.0 41.0 42-43 38.35727787768714 40.0 38.0 41.0 34.0 41.0 44-45 38.18410028040708 40.0 38.0 41.0 34.0 41.0 46-47 38.0198766771166 40.0 38.0 41.0 33.0 41.0 48-49 37.817526686254425 40.0 37.0 41.0 33.0 41.0 50-51 36.54227626099379 38.5 35.5 40.0 31.5 40.5 52-53 36.84909438136877 39.0 36.0 40.0 32.0 40.5 54-55 37.29836805889738 40.0 36.0 41.0 33.0 41.0 56-57 37.16406193395456 39.5 35.0 41.0 33.0 41.0 58-59 37.03139250827542 39.0 35.0 41.0 33.0 41.0 60-61 36.804864570840905 39.0 35.0 41.0 32.0 41.0 62-63 36.56396914981394 39.0 35.0 41.0 32.0 41.0 64-65 36.34584044804575 38.0 35.0 41.0 31.0 41.0 66-67 36.15368211374817 37.0 35.0 41.0 31.0 41.0 68-69 35.89508795568854 37.0 35.0 40.0 31.0 41.0 70-71 35.64139254071742 36.0 35.0 40.0 31.0 41.0 72-73 35.343546257435975 36.0 35.0 39.0 30.5 41.0 74-75 35.07483938502931 35.5 35.0 39.0 30.0 41.0 76-77 34.746671720410454 35.0 35.0 38.5 30.0 40.0 78-79 34.49484983135563 35.0 34.0 37.0 30.0 39.0 80-81 34.164821076923246 35.0 34.0 37.0 29.5 39.0 82-83 33.86418099612102 35.0 34.0 36.5 29.0 39.0 84-85 33.59514105244034 35.0 34.0 36.0 29.0 37.0 86-87 33.34692184828604 35.0 34.0 36.0 29.0 37.0 88-89 33.179967709388826 35.0 34.0 35.0 29.0 36.5 90-91 32.97840119300075 35.0 34.0 35.0 28.5 36.0 92-93 32.822523296064674 35.0 34.0 35.0 27.5 36.0 94-95 32.67185937038715 35.0 33.5 35.0 27.0 36.0 96-97 32.524422883726764 35.0 33.0 35.0 27.0 35.5 98-99 32.46836688017112 35.0 33.0 35.0 27.0 35.0 100-101 31.25022790510064 34.5 31.0 35.0 23.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 6.0 7 288.0 8 1226.0 9 838.0 10 710.0 11 941.0 12 1308.0 13 1501.0 14 1603.0 15 1666.0 16 1767.0 17 1918.0 18 2100.0 19 2230.0 20 2844.0 21 3652.0 22 4354.0 23 4285.0 24 4250.0 25 4498.0 26 4694.0 27 4893.0 28 5335.0 29 6216.0 30 7635.0 31 9657.0 32 13347.0 33 19247.0 34 32665.0 35 59615.0 36 128809.0 37 205460.0 38 281840.0 39 103268.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.23276366235623 20.596096779084625 13.367448610479347 23.803690948079797 2 15.517552748000222 20.744176389355996 39.050660357056735 24.687610505587053 3 19.209669448388553 28.700146097172464 28.350313119439573 23.73987133499941 4 12.518289181563858 17.330303970793544 40.353098806458554 29.798308041184047 5 12.812754466994042 40.146335080515655 34.417725447618594 12.62318500487171 6 27.501846490910292 38.97128557941966 20.16541098075432 13.361456948915734 7 26.095377338392844 31.36644652962442 23.946851340990367 18.59132479099237 8 25.296655120916768 35.34470173359273 21.350950064181102 18.0076930813094 9 26.867280829909802 15.628396272629653 20.935908651958904 36.56841424550164 10-11 25.398306743503756 25.877691470023045 28.14771278442178 20.576289002051414 12-13 25.8078330145005 23.745710896296963 28.37632079521848 22.070135293984062 14-15 23.17851600595203 25.62185569843048 25.458667089287484 25.74096120633001 16-17 22.550635459322812 28.499192689620546 26.795670392270598 22.154501458786047 18-19 22.53135311210972 27.826052625743703 27.37002702514144 22.272567237005138 20-21 23.77549828208435 26.22309536379136 27.04689433736921 22.954512016755086 22-23 23.819865677835654 27.160173202333244 26.2238785700798 22.796082549751304 24-25 23.122773962786987 27.128261925286267 26.59828525507561 23.15067885685114 26-27 22.897839037899832 28.08245027992045 27.060310772801056 21.95939990937866 28-29 22.385255324003733 27.9361368274096 27.405385589476676 22.273222259109986 30-31 22.65106350306631 27.160772855123728 27.31849508016961 22.869668561640356 32-33 22.80592001747543 27.076153286321258 27.57159680640881 22.5463298897945 34-35 23.324289222657065 26.746812843141814 27.062689853329687 22.866208080871438 36-37 22.40327903251451 26.77636794906878 27.831053463286104 22.9892995551306 38-39 22.712095544042906 27.43041267633736 26.858919835814092 22.998571943805636 40-41 23.168942685422756 26.53871214558589 27.7715744137821 22.52077075520925 42-43 22.91784385471341 27.006915241919916 27.619332397170314 22.455908506196355 44-45 22.949408384655694 26.507644413248766 27.374261798915136 23.168685403180408 46-47 23.12877205921315 26.543185177895744 26.985153456101095 23.342889306790006 48-49 22.340269074007786 26.878473322396772 27.453345690133414 23.327911913462028 50-51 22.444137567087367 27.29443392482322 27.09448302039413 23.166945487695287 52-53 22.660363545132782 26.940059066081123 26.824295170358386 23.57528221842771 54-55 22.871074381952727 26.60093195072708 26.990181967218437 23.53781170010176 56-57 22.879995933935096 26.814292218135733 26.9230270122966 23.38268483563257 58-59 22.934868428168162 26.79171308363707 27.426697238776104 22.84672124941866 60-61 22.70894983213927 27.3421005952999 27.16147726092825 22.787472311632577 62-63 22.2687114474008 26.6897430142217 27.93786693420807 23.103678604169428 64-65 23.25021570552612 26.203014738299835 26.91610069323293 23.630668862941114 66-67 22.325561272912616 27.07289044396194 26.48937752312555 24.11217075999989 68-69 22.517186153318764 26.835866152929462 27.930621686184136 22.716326007567638 70-71 23.061022334159162 26.523665903558562 27.338338774578872 23.0769729877034 72-73 22.561036933062407 26.91989095159977 27.558944423597453 22.96012769174037 74-75 22.853014997939933 26.3656192584406 27.485895837366055 23.295469906253413 76-77 22.513022762393657 26.071208043022427 27.31768402998939 24.098085164594522 78-79 22.83844395869679 25.46023749238841 27.559575892543293 24.14174265637151 80-81 22.418201432387892 26.90033770075666 26.78342463841349 23.898036228441956 82-83 22.172405641367142 27.15834333662058 27.31154374840078 23.3577072736115 84-85 22.518453936551342 26.020050537392482 27.857439554163278 23.6040559718929 86-87 22.223105875555284 27.35184785437249 27.465298122092396 22.959748147979834 88-89 22.71536586328894 26.278505359367248 26.878780453900568 24.127348323443236 90-91 22.42283398235371 26.19037834950207 27.10313422231642 24.283653445827795 92-93 22.35723385249607 26.229704096706584 27.77243066354924 23.640631387248106 94-95 22.639168100423152 25.64913752923836 27.541587949740844 24.170106420597648 96-97 23.0675648056129 26.291813692041003 27.573002626721184 23.067618875624916 98-99 21.682119083550113 26.298162525865926 27.852524087007914 24.167194303576053 100-101 22.57937654238843 25.91515497724216 27.402609767206858 24.102858713162544 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 0.5 2 0.5 3 2.5 4 3.0 5 2.5 6 3.0 7 6.0 8 11.0 9 15.0 10 17.5 11 18.0 12 20.5 13 22.5 14 17.5 15 23.0 16 36.0 17 32.5 18 35.5 19 43.5 20 47.5 21 57.0 22 73.5 23 90.5 24 122.5 25 169.0 26 221.5 27 278.5 28 366.5 29 550.0 30 1092.5 31 2240.0 32 4520.5 33 8453.0 34 13895.0 35 21888.0 36 34319.5 37 45354.5 38 50327.0 39 52553.5 40 50747.0 41 45818.5 42 40194.5 43 34433.5 44 30467.5 45 28893.0 46 28439.0 47 26062.0 48 25106.5 49 27507.0 50 30707.0 51 30804.0 52 29966.5 53 31387.5 54 33806.5 55 34507.5 56 28313.5 57 23108.0 58 22167.5 59 21482.0 60 18340.5 61 13665.5 62 11053.0 63 7690.5 64 4132.5 65 2259.0 66 1751.0 67 1738.5 68 1332.0 69 744.5 70 368.0 71 194.0 72 137.5 73 120.0 74 88.0 75 57.0 76 43.0 77 33.5 78 23.5 79 17.0 80 12.5 81 9.5 82 5.5 83 4.0 84 7.5 85 9.5 86 8.5 87 5.0 88 2.0 89 4.0 90 4.5 91 2.5 92 1.5 93 1.5 94 2.0 95 1.0 96 0.5 97 2.5 98 3.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14999021332782542 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03638911808566204 16-17 0.07256195612326666 18-19 0.02352045522624515 20-21 0.03795714843407838 22-23 0.06547878454938592 24-25 0.017086123796536706 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.020114044469340682 38-39 0.004704091045249031 40-41 0.00535293118942131 42-43 0.003298270732875757 44-45 0.010543652342799551 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.014815183291933728 60-61 0.016329143628335714 62-63 0.02806233623545111 64-65 0.04698684044047595 66-67 0.01670763371243621 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.016221003604307 80-81 0.057963052879390346 82-83 0.04839266075284922 84-85 0.02844082631955161 86-87 0.05769270281931857 88-89 0.03433445762911649 90-91 0.0 92-93 0.00356862079294754 94-95 0.0 96-97 0.0 98-99 7.029101561866367E-4 100-101 0.046500210332346734 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 924727.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.380639698160756 #Duplication Level Percentage of deduplicated Percentage of total 1 68.22095135504568 23.454799484035775 2 15.17621611133088 10.435360362101786 3 6.008539735185638 6.19732319242499 4 3.1206646468242774 4.291617873650143 5 1.7878766469716798 3.073417141214454 6 1.1609041606135113 2.3947576602089327 7 0.7773495677836063 1.8708042786642411 8 0.5704601444229381 1.5690227750052628 9 0.42350894287794527 1.3104457536632024 >10 2.244438758182958 14.37892609419175 >50 0.239326810407177 5.838502615048862 >100 0.24092858254874486 16.78090944786126 >500 0.02306763024399974 5.4230141575494 >1k 0.005766907560999935 2.9810991643799274 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 3009 0.3253933323023984 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2226 0.2407196934879159 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2016 0.21801028844188608 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1734 0.18751480166578893 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1636 0.17691707931097503 No Hit ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 1503 0.16253445611515616 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1454 0.1572355949377492 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1394 0.1507471934960264 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1346 0.14555647234264815 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1336 0.14447507210236102 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1323 0.14306925178998775 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1318 0.14252855166984418 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1189 0.12857848857014018 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1188 0.12847034854611145 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1160 0.12544242787330748 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1131 0.12230636717647479 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1096 0.11852146633546982 No Hit GCCTTATAGAAGGTAAACGAAACCACATAAATCAAGCCCTACTAATTACC 1005 0.1086807241488569 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 996 0.10770746393259849 No Hit CAATAAGGAATGTTGATCCAATAATTACATGGAGTCCATGGAATCCAGTA 995 0.10759932390856977 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 973 0.10522024337993809 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 951 0.10284116285130637 No Hit CCATTATACTAGGACTTTACTTCACCATCCTCCAAGCTTCAGAATACTTT 932 0.10078650239476084 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 1.0814002402871334E-4 0.0 12-13 0.0 0.0 0.0 1.0814002402871334E-4 0.0 14-15 0.0 0.0 0.0 1.0814002402871334E-4 0.0 16-17 0.0 0.0 0.0 3.2442007208614E-4 0.0 18-19 0.0 0.0 0.0 3.2442007208614E-4 0.0 20-21 0.0 0.0 0.0 3.784900841004967E-4 0.0 22-23 0.0 0.0 0.0 5.407001201435667E-4 0.0 24-25 0.0 0.0 0.0 0.00129768028834456 0.0 26-27 0.0 0.0 0.0 0.0021628004805742665 0.0 28-29 0.0 0.0 0.0 0.004109320913091107 0.0 30-31 0.0 0.0 0.0 0.010165162258699054 0.0 32-33 0.0 0.0 0.0 0.027846056187393685 0.0 34-35 0.0 0.0 0.0 0.052123491581839834 0.0 36-37 0.0 0.0 0.0 0.09208123046044941 0.0 38-39 0.0 0.0 0.0 0.16415655647558686 0.0 40-41 0.0 0.0 0.0 0.25077671572258625 0.0 42-43 0.0 0.0 0.0 0.3308544035158485 0.0 44-45 0.0 0.0 0.0 0.42244900386816864 0.0 46-47 0.0 0.0 0.0 0.5375099894347197 0.0 48-49 0.0 0.0 0.0 0.6546256354578162 0.0 50-51 0.0 0.0 0.0 0.7829337739678845 0.0 52-53 0.0 0.0 0.0 0.9149186732949293 0.0 54-55 0.0 0.0 0.0 1.0465791525498878 0.0 56-57 0.0 0.0 0.0 1.2010031068628904 0.0 58-59 0.0 0.0 0.0 1.371485854744157 0.0 60-61 0.0 0.0 0.0 1.5578651861576445 0.0 62-63 0.0 0.0 0.0 1.7591678408870943 0.0 64-65 0.0 0.0 0.0 1.958145485099927 0.0 66-67 0.0 0.0 0.0 2.1812383546711622 0.0 68-69 0.0 0.0 0.0 2.447100603745754 0.0 70-71 0.0 0.0 0.0 2.7364292380345767 0.0 72-73 0.0 0.0 0.0 3.0328951139092943 0.0 74-75 0.0 0.0 0.0 3.3370389314900506 0.0 76-77 0.0 0.0 0.0 3.65102349125742 0.0 78-79 0.0 0.0 0.0 4.01329257175361 0.0 80-81 0.0 0.0 0.0 4.402650728268991 0.0 82-83 0.0 0.0 0.0 4.814880499866447 0.0 84-85 0.0 0.0 0.0 5.234247513049797 0.0 86-87 0.0 0.0 0.0 5.674593690894718 0.0 88-89 0.0 0.0 0.0 6.166144170117235 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 765 0.0 53.440144 1 GTATCAA 1535 0.0 45.214222 1 AAACCGT 165 1.8189894E-12 34.529274 6 ATCAACG 1945 0.0 33.686012 3 AACCGTG 175 3.6379788E-12 32.55617 7 ATGCGGG 240 0.0 31.653545 8 TCAACGC 2155 0.0 30.403387 4 AATGCGG 250 0.0 30.38576 7 TCGCACC 1145 0.0 29.892181 1 CGCACCA 1165 0.0 29.342474 2 CCGTGCG 180 2.0918378E-10 29.03616 9 GTTCCGG 835 0.0 28.998386 6 GTACATG 4910 0.0 28.948114 1 TCCGGGC 870 0.0 28.924791 8 CTATTAA 455 0.0 28.20869 1 ATTAACC 405 0.0 28.134962 3 TTCCGGG 880 0.0 28.055035 7 TGTTCCG 865 0.0 27.99266 5 CATGGGA 1605 0.0 27.806284 4 ACATGGG 4965 0.0 27.63559 3 >>END_MODULE