##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224477_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 924727 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.1761903783495 34.0 33.0 34.0 31.0 34.0 2 33.30617252443154 34.0 33.0 34.0 31.0 34.0 3 33.427286107142976 34.0 34.0 34.0 31.0 34.0 4 36.63409308909549 37.0 37.0 37.0 35.0 37.0 5 36.673531755858754 37.0 37.0 37.0 35.0 37.0 6 36.71826928379944 37.0 37.0 37.0 36.0 37.0 7 36.701506498674746 37.0 37.0 37.0 36.0 37.0 8 36.69209507238352 37.0 37.0 37.0 36.0 37.0 9 38.54716689358048 39.0 39.0 39.0 38.0 39.0 10-11 38.573754199888185 39.0 39.0 39.0 37.5 39.0 12-13 38.56054381455284 39.0 39.0 39.0 38.0 39.0 14-15 40.163844572506264 41.0 40.0 41.0 38.0 41.0 16-17 40.177371808112014 41.0 40.0 41.0 38.0 41.0 18-19 40.18167091476728 41.0 40.0 41.0 38.5 41.0 20-21 40.18854213189406 41.0 40.0 41.0 39.0 41.0 22-23 40.12029279992906 41.0 40.0 41.0 38.0 41.0 24-25 40.08868184880511 41.0 40.0 41.0 38.0 41.0 26-27 40.029248632299044 41.0 40.0 41.0 38.0 41.0 28-29 40.007379475239716 41.0 40.0 41.0 38.0 41.0 30-31 39.96472742766243 41.0 40.0 41.0 38.0 41.0 32-33 39.9311710375062 41.0 40.0 41.0 38.0 41.0 34-35 39.858551767170205 41.0 40.0 41.0 38.0 41.0 36-37 39.754358854018534 41.0 40.0 41.0 37.0 41.0 38-39 39.64611231206615 41.0 40.0 41.0 37.0 41.0 40-41 39.52850625103409 41.0 39.5 41.0 36.5 41.0 42-43 39.45058487531996 41.0 39.0 41.0 36.0 41.0 44-45 39.22259704756107 41.0 39.0 41.0 35.0 41.0 46-47 39.02216978632613 41.0 39.0 41.0 35.0 41.0 48-49 38.92716174611534 40.5 38.0 41.0 35.0 41.0 50-51 38.76966391161932 40.0 38.0 41.0 35.0 41.0 52-53 38.53342878492788 40.0 37.0 41.0 35.0 41.0 54-55 38.342774137664414 40.0 37.0 41.0 35.0 41.0 56-57 38.12609775641892 40.0 36.0 41.0 35.0 41.0 58-59 37.87887560328616 40.0 35.0 41.0 34.5 41.0 60-61 37.64647620324701 39.0 35.0 41.0 34.0 41.0 62-63 37.46863182322999 39.0 35.0 41.0 34.0 41.0 64-65 37.23823950203682 39.0 35.0 41.0 34.0 41.0 66-67 37.00559732764373 38.0 35.0 41.0 34.0 41.0 68-69 36.77705203806096 37.0 35.0 40.5 33.0 41.0 70-71 36.498432510351705 37.0 35.0 40.0 33.0 41.0 72-73 36.22677341528905 36.0 35.0 39.5 33.0 41.0 74-75 35.92590569973625 36.0 35.0 39.0 33.0 41.0 76-77 34.05202183995925 34.5 33.0 37.0 29.5 39.0 78-79 35.31484535435864 35.0 35.0 37.5 33.0 39.0 80-81 35.19248924277111 35.0 35.0 37.0 33.0 39.0 82-83 34.950561084514675 35.0 35.0 37.0 33.0 39.0 84-85 34.69960539705232 35.0 35.0 36.0 33.0 37.5 86-87 34.47710243131216 35.0 35.0 36.0 33.0 37.0 88-89 34.306381234677914 35.0 35.0 36.0 33.0 37.0 90-91 34.144138756627626 35.0 35.0 35.0 33.0 36.0 92-93 34.03428417251794 35.0 35.0 35.0 33.0 36.0 94-95 33.91782709924118 35.0 35.0 35.0 32.0 36.0 96-97 33.866844484912846 35.0 35.0 35.0 32.0 36.0 98-99 33.832443521168955 35.0 34.5 35.0 32.0 35.5 100-101 33.04139005349687 34.5 33.0 35.0 29.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 1.0 13 7.0 14 11.0 15 28.0 16 80.0 17 132.0 18 279.0 19 440.0 20 655.0 21 859.0 22 1209.0 23 1314.0 24 1510.0 25 2202.0 26 3041.0 27 4363.0 28 6082.0 29 6472.0 30 6121.0 31 6667.0 32 7947.0 33 10435.0 34 18593.0 35 39331.0 36 117006.0 37 229655.0 38 316435.0 39 143652.0 40 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.396191684903435 20.969964207401485 13.55946200269042 23.074382105004663 2 15.117002098997867 20.993547284766205 40.075070804680735 23.814379811555195 3 18.807064138929654 29.555749967287642 28.765678951733864 22.871506942048843 4 12.282111369085147 17.997203498978617 41.10694291396271 28.61374221797352 5 12.478709932769346 39.53285672420076 35.53805609655606 12.450377246473824 6 27.129087828083314 38.82378258664449 20.83187794884328 13.215251636428912 7 25.85552276509716 31.254305324706642 24.62694395210695 18.26322795808925 8 25.206466340876823 35.283386339968445 21.43875976369242 18.071387555462316 9 26.651000781852375 15.935622080895225 21.343596542547154 36.06978059470525 10-11 25.21290067230653 26.125710615132895 28.54723610319586 20.11415260936471 12-13 25.832164519906957 24.092786303417117 28.551345424108952 21.523703752566973 14-15 23.036636758740688 26.102622720002767 25.664655622686478 25.196084898570064 16-17 22.424672362762198 28.75178295864617 27.05890495248868 21.764639726102946 18-19 22.172814246799323 27.960035772719948 28.012916244469988 21.854233736010737 20-21 23.467965368901655 26.596540783244187 27.407220363397272 22.528273484456886 22-23 23.72931394145452 27.336309378977568 26.601165545783196 22.333211133784715 24-25 23.4495627339214 27.04815387959421 26.745630853779996 22.75665253270439 26-27 22.803176582356848 28.290713411689893 27.204366367850486 21.701743638102766 28-29 22.404481501908748 27.910759281488932 27.783960029847844 21.90079918675448 30-31 22.756672289990483 27.019476165758284 27.6422592784843 22.581592265766933 32-33 22.928209506496795 27.18006586819548 27.890979539333564 22.000745085974163 34-35 23.44763259137497 26.933980755764754 27.079434514717054 22.53895213814322 36-37 22.340655621053497 26.865961365226543 27.84707870891554 22.94630430480442 38-39 22.572283495561393 27.41436121147106 27.052578761083 22.960776531884544 40-41 22.742171473310503 26.952549238856445 27.987665548859287 22.317613738973773 42-43 22.847337646678426 27.028896095820716 27.982042267609792 22.14172398989107 44-45 23.0303980706161 26.611492487677737 27.577374080392797 22.780735361313365 46-47 23.04254517827806 26.559730131622523 27.10842786735151 23.289296822747904 48-49 22.30810407474695 26.53397785275543 27.92342546933126 23.234492603166366 50-51 22.58093469748369 26.966120811872045 27.40679140978905 23.046153080855213 52-53 22.722664485120735 26.91644502455591 27.300991157926152 23.0598993323972 54-55 22.84539112624591 26.705449283950834 27.230631310646274 23.218528279156985 56-57 23.281593454873832 26.572649873061106 26.944841738697846 23.20091493336722 58-59 23.04480137261202 26.698482965136215 27.48599314775809 22.77072251449367 60-61 22.71902212126129 27.55757477419006 27.170263399859373 22.553139704689272 62-63 22.384930903931647 26.7930967734261 27.927215275427237 22.894757047215016 64-65 22.839767844996413 26.72280575780744 27.025489685063807 23.411936712132338 66-67 22.415372320695727 27.25198896539195 26.707341734371333 23.625296979540988 68-69 22.653929213703073 26.9866674164375 27.636534890838053 22.722868479021376 70-71 23.313150800182108 26.795205503894664 27.11627323523591 22.775370460687316 72-73 22.41364208031127 27.16872114688984 27.36596855071821 23.05166822208068 74-75 22.86637029090748 26.44304751564516 27.360020849396633 23.330561344050732 76-77 22.664767725791208 26.08253688119508 27.467487666616925 23.78520772639679 78-79 22.92190509561924 25.908039413533885 27.05338303825094 24.116672452595935 80-81 22.11596850131425 27.188677949568145 26.814654037343992 23.880699511773614 82-83 22.08890888288588 27.19498400600397 27.3320522275884 23.384054883521753 84-85 22.515730547894023 26.235206904625052 27.700687834664468 23.548374712816454 86-87 22.025257184012144 27.477460915491815 27.460699211767363 23.036582688728675 88-89 22.67415139819644 26.31165738645027 26.623046585640953 24.391144629712336 90-91 22.585368438468866 26.49176459647009 26.650622291768272 24.272244673292768 92-93 22.714163207087065 26.561190491896525 27.298975805832427 23.425670495183983 94-95 22.553088641296295 25.967123269894792 27.008079141195186 24.47170894761373 96-97 22.93936480712686 26.60693372206067 27.166396136373223 23.287305334439246 98-99 21.21512619400104 26.69263469110343 27.81853455127838 24.273704563617155 100-101 22.123535159948794 26.48523878421387 27.162238644615112 24.228987411222224 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 1.0 3 2.5 4 2.0 5 0.5 6 1.5 7 6.5 8 11.0 9 13.5 10 14.0 11 15.5 12 13.5 13 14.5 14 19.5 15 18.0 16 20.5 17 27.0 18 28.5 19 30.5 20 43.5 21 54.0 22 56.0 23 74.0 24 106.0 25 144.5 26 215.0 27 293.0 28 388.0 29 627.5 30 1312.0 31 2561.5 32 5162.5 33 9608.0 34 15616.0 35 23987.0 36 36604.5 37 47821.0 38 52418.0 39 54122.5 40 51250.5 41 45110.5 42 39073.0 43 33417.0 44 29772.5 45 27628.5 46 26089.0 47 24995.5 48 24721.0 49 27463.5 50 31918.5 51 31641.5 52 29340.5 53 30113.0 54 33355.5 55 33692.0 56 27535.0 57 22733.0 58 22146.0 59 21981.0 60 18425.0 61 13254.0 62 10425.5 63 6906.0 64 3391.0 65 1811.5 66 1466.5 67 1437.5 68 1032.0 69 518.0 70 210.0 71 104.5 72 86.0 73 79.5 74 56.0 75 36.0 76 23.5 77 10.5 78 7.0 79 3.5 80 2.0 81 1.5 82 2.5 83 3.0 84 1.0 85 0.0 86 0.5 87 0.5 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.47851960632705653 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 9.732602162584201E-4 22-23 0.0010814002402871334 24-25 4.3256009611485335E-4 26-27 0.0024331505406460503 28-29 0.004001180889062394 30-31 7.569801682009934E-4 32-33 1.6221003604307E-4 34-35 0.0037308308289906106 36-37 0.0017302403844594134 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.008597131910282711 46-47 0.07796895732470231 48-49 7.569801682009934E-4 50-51 0.0 52-53 5.407001201435667E-5 54-55 0.0 56-57 0.007515731669995577 58-59 0.03871412860227937 60-61 0.029954786655953594 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 1.0814002402871334E-4 78-79 0.007569801682009934 80-81 0.0057854912855361635 82-83 5.407001201435667E-4 84-85 0.0014598903243876302 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.07029101561866367 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 924727.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.27287337011156 #Duplication Level Percentage of deduplicated Percentage of total 1 66.36960015895656 21.419377015549408 2 15.881561935741237 10.250872745435217 3 6.408258126927301 6.204387091599393 4 3.2681777909834584 4.218939519976804 5 1.9238708475451223 3.1044420121636467 6 1.203751025618807 2.3309102651362603 7 0.8366232116604713 1.89001644778901 8 0.6289854668068067 1.6239334657517268 9 0.4432095631051092 1.2873281495862294 >10 2.467364691475453 14.744923603838004 >50 0.2689811850333053 6.119471643053424 >100 0.26931774934504515 18.13644737472284 >500 0.022555361507638972 5.099395526201269 >1k 0.007742885293667109 3.569555139196835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2348 0.2539127764194189 No Hit CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT 1813 0.1960578635640573 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1800 0.194652043251684 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1783 0.19281366284319587 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1777 0.1921648226990236 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1736 0.18773108171384637 No Hit ACTTAATACTTCAGTACTTCTAGCATCAGGTGTTTCAATTACATGAGCTC 1666 0.18016128003183643 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1505 0.16275073616321356 No Hit GCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACG 1431 0.1547483743850888 No Hit TCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCG 1392 0.15053091344796898 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1382 0.14944951320768185 No Hit GAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCAT 1321 0.14285297174193032 No Hit GTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACG 1296 0.14014947114121248 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1272 0.13755411056452338 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1266 0.13690527042035108 No Hit ACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCAT 1233 0.13333664962740355 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1204 0.13020058893057088 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCG 1173 0.12684824818568075 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1168 0.12630754806553718 No Hit CTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTA 1128 0.12198194710438864 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1067 0.11538540563863714 No Hit GCCTTATAGAAGGTAAACGAAACCACATAAATCAAGCCCTACTAATTACC 1050 0.113547025230149 No Hit CCATTATACTAGGACTTTACTTCACCATCCTCCAAGCTTCAGAATACTTT 1044 0.11289818508597672 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 999 0.10803188400468464 No Hit CAATAAGGAATGTTGATCCAATAATTACATGGAGTCCATGGAATCCAGTA 988 0.10684234374036877 No Hit GTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACT 982 0.10619350359619649 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 981 0.10608536357216779 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 1.0814002402871334E-4 0.0 14-15 0.0 0.0 0.0 1.0814002402871334E-4 0.0 16-17 0.0 0.0 0.0 3.2442007208614E-4 0.0 18-19 0.0 0.0 0.0 3.2442007208614E-4 0.0 20-21 0.0 0.0 0.0 3.784900841004967E-4 0.0 22-23 0.0 0.0 0.0 5.407001201435667E-4 0.0 24-25 0.0 0.0 0.0 0.0014058203123732734 0.0 26-27 0.0 0.0 0.0 0.00227094050460298 0.0 28-29 0.0 0.0 0.0 0.004325600961148533 0.0 30-31 0.0 0.0 0.0 0.010543652342799551 0.0 32-33 0.0 0.0 0.0 0.028494896331565968 0.0 34-35 0.0 0.0 0.0 0.0526641917019834 0.0 36-37 0.0 0.0 0.0 0.09251379055656427 0.0 38-39 0.0 0.0 0.0 0.16518388670385964 0.0 40-41 0.0 0.0 0.0 0.25250695610704565 0.0 42-43 0.0 0.0 0.0 0.33323348404448017 0.0 44-45 0.0 0.0 0.0 0.42569320458903004 0.0 46-47 0.0 0.0 0.0 0.5418355903958683 0.0 48-49 0.0 0.0 0.0 0.6597082165871657 0.0 50-51 0.0 0.0 0.0 0.7900169455417653 0.0 52-53 0.0 0.0 0.0 0.9236239452292406 0.0 54-55 0.0 0.0 0.0 1.056311754712472 0.0 56-57 0.0 0.0 0.0 1.2124118793979197 0.0 58-59 0.0 0.0 0.0 1.3853818478318467 0.0 60-61 0.0 0.0 0.0 1.5730047895216641 0.0 62-63 0.0 0.0 0.0 1.77674059479176 0.0 64-65 0.0 0.0 0.0 1.9773403393650233 0.0 66-67 0.0 0.0 0.0 2.2034070595970485 0.0 68-69 0.0 0.0 0.0 2.472837929464588 0.0 70-71 0.0 0.0 0.0 2.7668706547986597 0.0 72-73 0.0 0.0 0.0 3.0683650417907122 0.0 74-75 0.0 0.0 0.0 3.376726320308588 0.0 76-77 0.0 0.0 0.0 3.6948202009890485 0.0 78-79 0.0 0.0 0.0 4.061306742422358 0.0 80-81 0.0 0.0 0.0 4.456180040163205 0.0 82-83 0.0 0.0 0.0 4.87387088297411 0.0 84-85 0.0 0.0 0.0 5.299401877527098 0.0 86-87 0.0 0.0 0.0 5.7475882071141 0.0 88-89 0.0 0.0 0.0 6.245356737718268 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATTCG 20 0.0020764738 71.22814 4 GGTATCA 705 0.0 53.499905 1 GTATCAA 1580 0.0 47.139236 1 CCGTGCG 135 0.0 42.20927 9 ATCAACG 1975 0.0 36.305317 3 CTATTAA 380 0.0 35.179485 1 TCAACGC 2185 0.0 33.03334 4 AACCGTG 205 0.0 32.42907 7 ACCCTTG 385 0.0 30.834694 7 CATGGGA 1630 0.0 30.00613 4 GTACATG 5060 0.0 29.533087 1 AAACCGT 210 1.8189894E-12 29.39574 6 ACATGGG 4985 0.0 28.767498 3 CCCTTGG 380 0.0 28.74118 8 AACCCTT 400 0.0 28.491255 6 GGACCGT 100 4.962445E-5 28.491255 6 CGCAGAG 2560 0.0 27.823492 8 TCCGGGC 740 0.0 27.592886 8 TCGCACC 920 0.0 27.504456 1 CGCACCA 970 0.0 26.924726 2 >>END_MODULE