##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224476_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 953035 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11046288961056 34.0 31.0 34.0 31.0 34.0 2 32.26729343623267 34.0 31.0 34.0 31.0 34.0 3 32.40602811019532 34.0 31.0 34.0 31.0 34.0 4 35.643893456168975 37.0 37.0 37.0 35.0 37.0 5 35.6511324348004 37.0 37.0 37.0 35.0 37.0 6 35.75597223606688 37.0 37.0 37.0 35.0 37.0 7 35.716612716217135 37.0 37.0 37.0 35.0 37.0 8 35.7516303178792 37.0 37.0 37.0 35.0 37.0 9 37.49240688956859 39.0 39.0 39.0 35.0 39.0 10-11 37.568641760271134 39.0 39.0 39.0 36.0 39.0 12-13 37.57164112545709 39.0 39.0 39.0 35.0 39.0 14-15 39.09249817687703 41.0 40.0 41.0 37.0 41.0 16-17 38.94022517536082 41.0 40.0 41.0 36.5 41.0 18-19 39.020775207626166 41.0 40.0 41.0 36.5 41.0 20-21 39.082038959744395 41.0 40.0 41.0 37.0 41.0 22-23 39.04626797546784 41.0 40.0 41.0 36.5 41.0 24-25 39.00186299558778 41.0 40.0 41.0 36.0 41.0 26-27 38.856719323004924 41.0 40.0 41.0 35.5 41.0 28-29 38.79185549324002 41.0 39.5 41.0 35.0 41.0 30-31 38.73631660956838 41.0 39.0 41.0 35.0 41.0 32-33 38.56357479001296 41.0 39.0 41.0 35.0 41.0 34-35 38.583138079923614 41.0 39.0 41.0 35.0 41.0 36-37 38.584045181971284 41.0 39.0 41.0 35.0 41.0 38-39 38.48165649740041 41.0 39.0 41.0 35.0 41.0 40-41 38.41153472852518 41.0 39.0 41.0 35.0 41.0 42-43 38.30224335937295 40.5 38.5 41.0 34.5 41.0 44-45 38.153557319510824 40.0 38.0 41.0 34.0 41.0 46-47 38.01906960394949 40.0 38.0 41.0 34.0 41.0 48-49 37.85940233044956 40.0 38.0 41.0 33.0 41.0 50-51 36.62345611651199 39.0 36.0 40.0 31.5 40.5 52-53 36.94685662121538 39.5 36.5 40.5 32.5 40.5 54-55 37.417345113243485 40.0 36.5 41.0 33.0 41.0 56-57 37.303095898891435 40.0 36.0 41.0 33.0 41.0 58-59 37.18081759851422 40.0 35.5 41.0 33.0 41.0 60-61 36.96931907012859 39.5 35.0 41.0 32.5 41.0 62-63 36.708597270824264 39.0 35.0 41.0 32.0 41.0 64-65 36.48973437491803 39.0 35.0 41.0 32.0 41.0 66-67 36.26217557592324 38.0 35.0 41.0 31.0 41.0 68-69 35.98228711432424 37.0 35.0 40.0 31.0 41.0 70-71 35.69010477054883 37.0 35.0 40.0 31.0 41.0 72-73 35.361153577780456 36.0 35.0 39.0 30.5 41.0 74-75 35.047586919682914 36.0 35.0 39.0 30.0 41.0 76-77 34.68274564942526 35.5 35.0 38.5 30.0 40.0 78-79 34.3910695829639 35.0 35.0 37.0 30.0 39.0 80-81 34.03887475276354 35.0 34.0 37.0 29.5 39.0 82-83 33.73670169511088 35.0 34.0 36.5 29.0 38.0 84-85 33.47310277167155 35.0 34.0 36.0 29.0 37.0 86-87 33.22569685268642 35.0 34.0 36.0 29.0 37.0 88-89 33.04952756194683 35.0 34.0 35.0 29.0 36.5 90-91 32.862886462721725 35.0 34.0 35.0 28.5 36.0 92-93 32.71325712067238 35.0 34.0 35.0 27.0 36.0 94-95 32.57039668007995 35.0 34.0 35.0 27.0 36.0 96-97 32.439879437796094 35.0 34.0 35.0 27.0 35.0 98-99 32.380339651744166 35.0 33.0 35.0 26.0 35.0 100-101 31.225898314332632 34.5 31.0 35.0 22.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 11.0 7 1022.0 8 4928.0 9 3369.0 10 1967.0 11 1938.0 12 2062.0 13 2009.0 14 1858.0 15 1775.0 16 1745.0 17 1849.0 18 1901.0 19 2038.0 20 2353.0 21 2978.0 22 3439.0 23 3435.0 24 3621.0 25 3753.0 26 4116.0 27 4486.0 28 4898.0 29 5625.0 30 7216.0 31 8998.0 32 12141.0 33 17183.0 34 28717.0 35 52329.0 36 115488.0 37 213689.0 38 323849.0 39 106240.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.09886474922348 19.31155719755717 12.797945536543642 24.791632516675705 2 15.924283997964398 20.270923942982158 38.68430855110253 25.120483507950915 3 19.406568293018182 26.614818164743507 28.50132157018697 25.477291972051336 4 12.86364089461562 16.66927237719496 38.67990157759159 31.787185150597825 5 13.476420068517944 38.85817414890324 34.63713294894731 13.028272833631505 6 29.95577287297948 37.52013304862886 19.071177868598742 13.452916209792926 7 27.199945437470817 31.28552466593567 23.056655841600783 18.457874054992736 8 25.67502767474437 35.397335879584695 20.883912972765952 18.043723472904983 9 26.680027491120473 15.656612821145078 20.18782101391869 37.475538673815755 10-11 25.412655358932252 25.546333555430806 28.36349137230007 20.677519713336867 12-13 25.928848363386443 23.172915999937043 28.42566117718657 22.472574459489945 14-15 23.085292197363643 25.091531451340327 25.28776774524026 26.53540860605577 16-17 22.90169678755976 28.156760951309895 26.357015275183258 22.584526985947086 18-19 22.972014210672697 27.572430875152836 26.987631257182738 22.467923656991726 20-21 23.716991213052253 26.2417035195027 26.84270303349663 23.198602233948414 22-23 23.840180342310198 26.792004712251327 26.251691759125002 23.116123186313473 24-25 23.235998497159084 26.83547040389899 26.59477447941045 23.333756619531474 26-27 23.123967115583373 27.607433095321788 26.787998342138536 22.480601446956303 28-29 22.95146558101224 27.349835000813194 27.051892113091334 22.646807305083232 30-31 23.052721043823155 27.059237068942902 26.812446552330186 23.075595334903753 32-33 22.98997413526261 27.085521518097444 26.979491833983012 22.94501251265693 34-35 23.36734747412215 26.768639137072615 26.730445366644457 23.13356802216078 36-37 22.92291021103202 26.701388251160374 27.360486137166877 23.01521540064073 38-39 22.98830733973353 26.9334128024294 26.714837810640397 23.363442047196667 40-41 23.275068273218796 26.554333939331933 27.306611680819753 22.86398610662952 42-43 23.295113515691565 26.794865875617525 27.11307287753569 22.79694773115522 44-45 23.125107236798264 26.530659361359284 26.939352901021024 23.404880500821427 46-47 23.176063838159145 26.26713604432156 27.16322065821297 23.39357945930632 48-49 22.78746320964078 26.715230815237632 27.175602155219902 23.321703819901682 50-51 22.913219346613715 26.943449086339953 26.906934162963587 23.236397404082744 52-53 22.996112419795704 26.734694948244293 26.683647505075893 23.58554512688411 54-55 23.067253563615186 26.427885649530186 26.974979932531333 23.52988085432329 56-57 22.935254214168417 26.69692088957908 26.944183581925113 23.423641314327387 58-59 23.191240062400073 26.691510557166747 27.050631058256336 23.066618322176847 60-61 23.010246809153703 27.021446516987414 26.87457628541624 23.09373038844264 62-63 22.75222877390671 26.572054418398643 27.25580047986599 23.41991632782866 64-65 23.41802083918367 26.089291141273623 26.73170403971108 23.760983979831625 66-67 22.75874445297418 26.64419433598618 26.48483458751957 24.112226623520073 68-69 22.746908560546046 26.69387797929772 27.460166730497832 23.099046729658408 70-71 23.202033503491474 26.389377095279816 27.084944414423397 23.323644986805313 72-73 22.92659765905764 26.81748309348555 27.17418562801996 23.08173361943685 74-75 22.977067998551995 26.670426584543065 27.068575655668468 23.28392976123647 76-77 22.970982177989267 26.3265777227489 26.80022244723436 23.90221765202747 78-79 23.176883827242637 25.830277665252698 27.21388137361288 23.778957133891783 80-81 22.978459367608103 26.75471060254347 26.640534856936476 23.62629517291195 82-83 22.78465398505081 27.03320525741161 26.93011463844797 23.25202611908961 84-85 23.00233375719164 26.22808265079551 27.31524509698448 23.454338495028367 86-87 22.824926376793336 26.98268214197599 27.066515483183462 23.125875998047213 88-89 23.09972426229405 26.389840844657964 26.647157550458324 23.86327734258967 90-91 22.91998719879123 26.24615045617422 26.87529838883147 23.958563956203076 92-93 22.979412831002 26.31258351945679 27.217466171176913 23.490537478364296 94-95 23.16383973306332 26.114780674371872 27.203932699218814 23.517446893345994 96-97 23.559680389492517 26.40102409670159 26.96102451641335 23.07827099739254 98-99 22.65055019773961 26.428064019575643 27.05806063035337 23.863325152331374 100-101 23.224500336450795 26.087848824941663 26.693197815221854 23.99445302338569 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 1.0 2 2.0 3 3.0 4 2.5 5 2.0 6 2.5 7 3.5 8 7.5 9 12.0 10 11.5 11 10.0 12 11.5 13 12.5 14 15.5 15 22.5 16 23.5 17 25.0 18 35.0 19 45.5 20 47.5 21 50.0 22 61.0 23 76.5 24 86.0 25 114.5 26 158.0 27 191.5 28 235.5 29 314.5 30 541.0 31 1093.5 32 2383.0 33 5102.5 34 9392.5 35 16200.5 36 26122.5 37 35950.5 38 44247.0 39 50112.5 40 52416.5 41 51909.0 42 49463.0 43 45951.5 44 42413.0 45 39636.0 46 36810.0 47 32703.5 48 29559.5 49 29032.0 50 29573.5 51 28765.0 52 27446.0 53 28364.5 54 30611.0 55 31358.5 56 27517.0 57 23895.5 58 23158.0 59 22457.5 60 19435.5 61 15145.0 62 12518.0 63 9239.5 64 5744.0 65 3772.5 66 2896.5 67 2573.5 68 1943.0 69 1224.5 70 792.5 71 540.0 72 409.0 73 317.0 74 222.5 75 146.5 76 103.0 77 61.5 78 36.0 79 23.0 80 15.5 81 15.5 82 8.5 83 6.5 84 9.5 85 9.0 86 7.5 87 7.0 88 7.5 89 6.0 90 4.0 91 4.0 92 3.0 93 3.0 94 2.5 95 2.0 96 2.5 97 3.5 98 3.5 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14175764793528045 2 0.0 3 2.0985588147339815E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03745927484300157 16-17 0.07407912616010955 18-19 0.024133426369440786 20-21 0.03903319395405205 22-23 0.06547503501970021 24-25 0.018152533747448938 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.02282182711023205 38-39 0.004616829392414759 40-41 0.006557996296043692 42-43 0.004092189688731263 44-45 0.012643816858772238 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.015896583021609907 60-61 0.01605397493271496 62-63 0.02822561605817205 64-65 0.04768974906482973 66-67 0.016736006547503502 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01689339845860855 80-81 0.058339935049604684 82-83 0.049840771849932054 84-85 0.029327359435907394 86-87 0.05771036740518449 88-89 0.0333670851542703 90-91 0.0 92-93 0.004039725718362914 94-95 0.0 96-97 0.0 98-99 0.001468991170313787 100-101 0.04658800568709439 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 953035.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.14395072886497 #Duplication Level Percentage of deduplicated Percentage of total 1 69.72133693519524 31.474965993530475 2 15.110872941565889 13.643290070883788 3 5.95498041499588 8.064940273377896 4 2.951121972748176 5.3290121973045785 5 1.7050472810190447 3.848628522235447 6 1.0851118810288174 2.9391742375482552 7 0.7158582007814885 2.262166714145341 8 0.4968117230975815 1.7942435159231784 9 0.36764938306531453 1.4937431071138347 >10 1.657677638386696 13.081847178308983 >50 0.11899797391766212 3.756578801155449 >100 0.10655385044895513 9.472295422681706 >500 0.007041003308159597 2.15974395725799 >1k 9.388004410879464E-4 0.6793700085330766 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 2220 0.23294002843547196 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1605 0.168409344882402 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1415 0.14847303614242918 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 1172 0.12297554654341131 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 985 0.10335402162564859 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 961 0.10083575104796781 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0492794073669908E-4 0.0 5 0.0 0.0 0.0 1.0492794073669908E-4 0.0 6 0.0 0.0 0.0 1.0492794073669908E-4 0.0 7 0.0 0.0 0.0 1.0492794073669908E-4 0.0 8 0.0 0.0 0.0 1.0492794073669908E-4 0.0 9 0.0 0.0 0.0 3.147838222100972E-4 0.0 10-11 0.0 0.0 0.0 4.197117629467963E-4 0.0 12-13 0.0 0.0 0.0 6.820316147885439E-4 0.0 14-15 0.0 0.0 0.0 0.0011017433777353403 5.246397036834954E-5 16-17 0.0 0.0 0.0 0.0013115992592087383 1.0492794073669908E-4 18-19 0.0 0.0 0.0 0.0017313110221555347 1.0492794073669908E-4 20-21 0.0 0.0 0.0 0.0019936308739972822 1.0492794073669908E-4 22-23 0.0 0.0 0.0 0.002833054399890875 1.0492794073669908E-4 24-25 0.0 0.0 0.0 0.0037249418961528167 1.0492794073669908E-4 26-27 0.0 0.0 0.0 0.005928428651623498 1.0492794073669908E-4 28-29 0.0 0.0 0.0 0.008813947021882722 1.0492794073669908E-4 30-31 0.0 0.0 0.0 0.01888702933260583 1.0492794073669908E-4 32-33 0.0 0.0 0.0 0.03856101822073691 1.0492794073669908E-4 34-35 0.0 0.0 0.0 0.06416343576049148 1.0492794073669908E-4 36-37 0.0 0.0 0.0 0.11069897747721752 1.0492794073669908E-4 38-39 0.0 0.0 0.0 0.20403238076251135 1.0492794073669908E-4 40-41 0.0 0.0 0.0 0.32244356188387624 1.0492794073669908E-4 42-43 0.0 0.0 0.0 0.4314636923093066 1.0492794073669908E-4 44-45 0.0 0.0 0.0 0.5476713866752008 1.0492794073669908E-4 46-47 0.0 0.0 0.0 0.6780443530405494 1.0492794073669908E-4 48-49 0.0 0.0 0.0 0.8148179237908366 1.0492794073669908E-4 50-51 0.0 0.0 0.0 0.9638680636073177 1.0492794073669908E-4 52-53 0.0 0.0 0.0 1.1076718063869637 1.0492794073669908E-4 54-55 0.0 0.0 0.0 1.2478030712408255 1.0492794073669908E-4 56-57 0.0 0.0 0.0 1.407136149249503 1.0492794073669908E-4 58-59 0.0 0.0 0.0 1.5843069771834193 1.0492794073669908E-4 60-61 0.0 0.0 0.0 1.7839323844349892 1.0492794073669908E-4 62-63 0.0 0.0 0.0 1.9933160901750722 1.0492794073669908E-4 64-65 0.0 0.0 0.0 2.1863310371602305 1.0492794073669908E-4 66-67 0.0 0.0 0.0 2.403741730366671 1.0492794073669908E-4 68-69 0.0 0.0 0.0 2.6584018425346394 1.573919111050486E-4 70-71 0.0 0.0 0.0 2.9271222987613257 2.623198518417477E-4 72-73 0.0 0.0 0.0 3.2179825504834554 3.147838222100972E-4 74-75 0.0 0.0 0.0 3.5135120955683687 3.147838222100972E-4 76-77 0.0 0.0 0.0 3.8042674193497614 3.147838222100972E-4 78-79 0.0 0.0 0.0 4.1335837613518915 3.147838222100972E-4 80-81 0.0 0.0 0.0 4.4934865980787695 3.672477925784468E-4 82-83 0.0 0.0 0.0 4.902495711070422 4.197117629467963E-4 84-85 0.0 0.0 0.0 5.295240993247887 4.197117629467963E-4 86-87 0.0 0.0 0.0 5.719674513527835 4.7217573331514583E-4 88-89 0.0 0.0 0.0 6.171126978547482 5.246397036834954E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1355 0.0 43.1469 1 GGTATCA 665 0.0 40.741497 1 ATCAACG 1690 0.0 32.030872 3 CGTTATA 75 3.0660155E-4 31.687832 1 TCAACGC 1735 0.0 31.2001 4 AATGCGG 190 1.2732926E-11 29.990124 7 CCGTGCG 80 4.487925E-4 29.693308 9 TCGCACC 675 0.0 28.871134 1 GTACATG 3845 0.0 28.308897 1 CGCAGAG 1965 0.0 27.306532 8 TACATGG 3930 0.0 26.58158 2 ACATGGG 3850 0.0 26.147234 3 CGCACCA 745 0.0 26.132336 2 ACGCAGA 2115 0.0 25.369896 7 TATCAAC 2225 0.0 25.18272 2 CTGTGCG 890 0.0 25.089176 9 TTACACG 495 0.0 24.941282 4 CAACGCA 2255 0.0 24.005398 5 ATGCGGG 220 2.1755113E-9 23.742184 8 CATGGGG 2480 0.0 23.550714 4 >>END_MODULE