##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224472_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 817114 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.068286677256786 34.0 31.0 34.0 31.0 34.0 2 32.22970479027406 34.0 31.0 34.0 31.0 34.0 3 32.37053458880891 34.0 31.0 34.0 31.0 34.0 4 35.59563904179833 37.0 37.0 37.0 35.0 37.0 5 35.606805170392384 37.0 37.0 37.0 35.0 37.0 6 35.7102827757204 37.0 37.0 37.0 35.0 37.0 7 35.674413851677976 37.0 37.0 37.0 35.0 37.0 8 35.705371588297346 37.0 37.0 37.0 35.0 37.0 9 37.44327964029499 39.0 39.0 39.0 35.0 39.0 10-11 37.51646955014845 39.0 39.0 39.0 35.0 39.0 12-13 37.533105539741086 39.0 39.0 39.0 35.0 39.0 14-15 39.04941721718144 41.0 40.0 41.0 37.0 41.0 16-17 38.890498143465905 41.0 40.0 41.0 36.5 41.0 18-19 38.97660546753574 41.0 40.0 41.0 36.0 41.0 20-21 39.03757615216482 41.0 40.0 41.0 37.0 41.0 22-23 39.00054521156167 41.0 40.0 41.0 36.0 41.0 24-25 38.9632664475214 41.0 40.0 41.0 36.0 41.0 26-27 38.82073492805166 41.0 39.5 41.0 36.0 41.0 28-29 38.756358353913896 41.0 39.0 41.0 35.0 41.0 30-31 38.69776799810063 41.0 39.0 41.0 35.0 41.0 32-33 38.518949620248826 41.0 39.0 41.0 35.0 41.0 34-35 38.540657729521214 41.0 39.0 41.0 35.0 41.0 36-37 38.55725027352365 41.0 39.0 41.0 35.0 41.0 38-39 38.470138193691454 41.0 39.0 41.0 35.0 41.0 40-41 38.409227476215065 41.0 39.0 41.0 35.0 41.0 42-43 38.29345721649611 40.5 39.0 41.0 34.0 41.0 44-45 38.17036362123278 40.0 38.0 41.0 34.0 41.0 46-47 38.04797494596837 40.0 38.0 41.0 33.5 41.0 48-49 37.89322114172563 40.0 38.0 41.0 33.0 41.0 50-51 36.690008370924986 39.0 36.5 40.0 31.5 40.5 52-53 37.036176714632234 39.5 37.0 40.5 32.5 40.5 54-55 37.53913591004438 40.0 37.0 41.0 33.0 41.0 56-57 37.44010321693179 40.0 36.5 41.0 33.0 41.0 58-59 37.33180682254863 40.0 36.0 41.0 33.0 41.0 60-61 37.12637465518887 40.0 35.5 41.0 32.5 41.0 62-63 36.86398776670085 39.0 35.0 41.0 32.0 41.0 64-65 36.63598286163253 39.0 35.0 41.0 31.0 41.0 66-67 36.405002851499304 39.0 35.0 41.0 31.0 41.0 68-69 36.10805774959185 38.0 35.0 40.5 31.0 41.0 70-71 35.80326918887695 37.0 35.0 40.0 31.0 41.0 72-73 35.45826836891792 37.0 35.0 39.5 30.0 41.0 74-75 35.12194810026508 36.0 35.0 39.0 30.0 41.0 76-77 34.73215059343005 36.0 35.0 39.0 30.0 40.0 78-79 34.41025120117878 35.0 35.0 37.0 29.5 39.0 80-81 34.0344970224473 35.0 34.0 37.0 29.0 39.0 82-83 33.71467628751925 35.0 34.0 36.5 29.0 38.5 84-85 33.43716849790849 35.0 34.0 36.0 29.0 37.0 86-87 33.16641435589159 35.0 34.0 36.0 29.0 37.0 88-89 32.968479918346766 35.0 34.0 35.5 28.0 36.5 90-91 32.767439427056686 35.0 34.0 35.0 27.0 36.0 92-93 32.601365904879856 35.0 34.0 35.0 27.0 36.0 94-95 32.44559816622895 35.0 33.5 35.0 26.5 36.0 96-97 32.28901475191957 35.0 33.0 35.0 25.5 35.0 98-99 32.19974079504206 35.0 33.0 35.0 25.0 35.0 100-101 30.994840377230105 34.5 31.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 15.0 7 871.0 8 4253.0 9 2832.0 10 1700.0 11 1693.0 12 1749.0 13 1812.0 14 1675.0 15 1626.0 16 1537.0 17 1628.0 18 1735.0 19 1871.0 20 2111.0 21 2476.0 22 2934.0 23 2918.0 24 3190.0 25 3403.0 26 3633.0 27 3993.0 28 4612.0 29 5368.0 30 6535.0 31 8127.0 32 10723.0 33 15092.0 34 24401.0 35 42767.0 36 90335.0 37 176267.0 38 289709.0 39 93519.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.84569226696473 18.965521467580473 12.934106931003717 25.25467933445108 2 15.767238762862373 20.35608337657506 38.9701778948296 24.906499965732973 3 19.42306492018832 25.682679586983898 28.725595420940365 26.168660071887416 4 12.949478285771631 17.061633994766947 38.328801121997664 31.660086597463753 5 13.773843062289961 37.97169060865436 34.84311858565635 13.411347743399329 6 29.833046551643953 37.45511642194357 19.32129421353691 13.390542812875559 7 27.14835384046779 31.054418355333528 23.01845274955514 18.77877505464354 8 25.18498030874517 35.3828229598318 21.423693633936022 18.008503097487008 9 26.363028904167596 15.85604946188659 20.088996149864034 37.69192548408178 10-11 24.811042278066463 25.76874218285331 28.82829078929011 20.591924749790113 12-13 25.571523679682397 23.298034301211338 28.692140876303675 22.438301142802594 14-15 22.705716785025402 25.19036259337546 25.641515359088828 26.46240526251031 16-17 22.78284662034182 27.964599277018863 26.635173773286684 22.617380329352628 18-19 22.761084176514405 27.609495205328948 27.247821480444586 22.38159913771206 20-21 23.566937077457634 26.518765105009663 27.184426199402047 22.729871618130666 22-23 23.455077852319402 26.811471735823822 26.691454002591403 23.04199640926537 24-25 23.02194466341234 26.875908852776863 27.017959175679714 23.084187308131078 26-27 22.864373881734984 27.53324505515754 27.090405989861882 22.511975073245594 28-29 22.763531159666826 27.418817937276806 27.18549676054994 22.63215414250643 30-31 22.970723791294727 27.037965326747553 27.151902916851263 22.83940796510646 32-33 22.66066913551842 27.106682788448122 27.334129631850633 22.89851844418282 34-35 23.100999370956806 26.834566535391634 27.123632687727785 22.940801405923775 36-37 22.729267437312828 26.80046784713811 27.534370912687507 22.935893802861553 38-39 22.82795138963257 27.08200108069275 27.06731442957353 23.022733100101153 40-41 23.00539124794233 26.77345131660272 27.488327122077187 22.73283031337776 42-43 22.980096990836355 26.861321461899735 27.360594795539033 22.797986751724878 44-45 22.894293638573444 26.778234996046596 27.21133438920562 23.11613697617433 46-47 22.866270801870975 26.51417060532557 27.287440920116406 23.33211767268704 48-49 22.493373017718458 26.773681518123542 27.43160685045171 23.30133861370629 50-51 22.535533597515155 26.995131646257438 27.265412170150068 23.20392258607734 52-53 22.68159644798645 26.860205552713573 27.023157111492395 23.435040887807578 54-55 22.711885979190175 26.56379648372198 27.27936371179542 23.44495382529243 56-57 22.655053428930007 26.78489585596126 27.16911420506454 23.3909365100442 58-59 22.76756534447684 26.82758899260445 27.27680549537442 23.12804016754429 60-61 22.793173957827776 26.85292232968709 27.06957933655218 23.284324375932954 62-63 22.459272770675785 26.560855952770794 27.43694662843117 23.54292464812225 64-65 22.99146827048815 26.22104868767111 27.021939082863568 23.765543958977172 66-67 22.523604320170488 26.697684154091057 26.806073992742597 23.97263753299586 68-69 22.43805637891408 26.669473292588304 27.630783464730747 23.26168686376687 70-71 22.78892541310025 26.32992458824595 27.286094718729576 23.59505527992422 72-73 22.473302378860232 26.70594311197703 27.31834236104142 23.502412148121316 74-75 22.570963170377695 26.3545233590417 27.42047009352428 23.654043377056322 76-77 22.525987805863075 26.181475289861634 27.12130743078689 24.1712294734884 78-79 22.786791837344218 25.79138995635673 27.377138174302555 24.044680031996492 80-81 22.58063133558163 26.34769255637275 27.141760284490424 23.929915823555202 82-83 22.340390360973696 26.591443405005634 27.246473526962827 23.821692707057842 84-85 22.648994299572088 25.9232667191843 27.584917278607268 23.84282170263635 86-87 22.35954375100644 26.478189551876007 27.39434899288588 23.76791770423167 88-89 22.572468314719536 25.951905095660315 27.260328896424866 24.21529769319528 90-91 22.54611963569343 25.81341159250729 27.407130461600214 24.233338310199066 92-93 22.591379609979857 25.895009827606884 27.56190902793586 23.951701534477397 94-95 22.813585374868133 25.50751792283574 27.6345161140306 24.04438058826553 96-97 22.963136110750764 25.697148745462687 27.591927197429 23.747787946357548 98-99 22.38955387088464 25.699097975600488 27.49959766566537 24.411750487849503 100-101 22.845558268965522 25.35184710162717 27.237364328651424 24.565230300755882 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 2.5 3 2.0 4 1.0 5 2.0 6 3.5 7 9.0 8 15.0 9 19.5 10 16.0 11 12.5 12 14.0 13 19.5 14 25.5 15 21.0 16 21.0 17 28.5 18 35.0 19 44.0 20 56.0 21 65.5 22 76.0 23 94.5 24 109.0 25 131.0 26 181.5 27 234.5 28 287.5 29 343.5 30 489.5 31 892.0 32 1816.5 33 3810.5 34 7378.5 35 12952.5 36 21418.5 37 30381.0 38 37731.0 39 42883.0 40 45255.5 41 45816.0 42 44769.5 43 42718.0 44 39637.5 45 36375.5 46 33525.0 47 29875.0 48 26621.5 49 25548.0 50 25411.0 51 24255.5 52 23335.5 53 23902.0 54 24931.0 55 24905.0 56 22055.5 57 19358.0 58 18450.5 59 17394.0 60 14885.0 61 11791.0 62 9641.0 63 7103.0 64 4633.5 65 3218.0 66 2480.0 67 2033.5 68 1581.5 69 1113.0 70 766.0 71 525.5 72 393.5 73 311.5 74 237.5 75 173.5 76 137.0 77 93.5 78 55.0 79 38.0 80 24.0 81 19.0 82 14.5 83 14.0 84 12.0 85 6.5 86 6.5 87 4.5 88 2.5 89 4.0 90 4.5 91 2.5 92 2.5 93 3.5 94 2.5 95 4.0 96 4.5 97 2.5 98 2.5 99 2.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1451449858893618 2 2.447638885149441E-4 3 3.6714583277241606E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03885626730174737 16-17 0.07752896168710853 18-19 0.026618072876000164 20-21 0.040630805493480714 22-23 0.06951294433824412 24-25 0.018357291638620807 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0220899409384737 38-39 0.005568378463714977 40-41 0.005996715268616129 42-43 0.003243121522823009 44-45 0.011748666648717314 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 6.119097212873602E-5 58-59 0.016643944419016198 60-61 0.01890801038777943 62-63 0.030167149259466855 64-65 0.04870801381447387 66-67 0.0190303923320369 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01829610066649207 80-81 0.06070144435170613 82-83 0.05311376380774285 84-85 0.030044767315209383 86-87 0.06100739921234981 88-89 0.035674336751053096 90-91 0.0 92-93 0.003426694439209217 94-95 0.0 96-97 0.0 98-99 9.178645819310403E-4 100-101 0.047545385344027885 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 817114.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.169912790244915 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68783662872606 44.60924768765544 2 13.43765674383838 15.633346417886502 3 4.495543332099119 7.845160907189183 4 1.916308525161886 4.458859991514791 5 1.0643173311884646 3.09556231681896 6 0.6069040796644781 2.1182134431675927 7 0.38301762298022013 1.559607120812042 8 0.25770606375198357 1.1992591403176145 9 0.18307243171126197 0.9584376648247959 >10 0.8339426980852102 8.68352668728428 >50 0.07488704308842907 3.0217346413172224 >100 0.056480584255971605 5.8669646221761065 >500 0.00211537768052113 0.7791610544505907 >1k 2.1153776805211302E-4 0.1709183045849448 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1389 0.16998852057362865 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 989 0.12103574287063983 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 870 0.10647229150400066 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.2238194425747204E-4 0.0 10-11 0.0 0.0 0.0 2.447638885149441E-4 0.0 12-13 0.0 0.0 0.0 2.447638885149441E-4 0.0 14-15 0.0 0.0 0.0 2.447638885149441E-4 0.0 16-17 0.0 0.0 0.0 3.671458327724161E-4 0.0 18-19 0.0 0.0 0.0 4.283368049011521E-4 0.0 20-21 0.0 0.0 0.0 9.178645819310403E-4 0.0 22-23 0.0 0.0 0.0 0.0018969201359908166 0.0 24-25 0.0 0.0 0.0 0.004895277770298881 0.0 26-27 0.0 0.0 0.0 0.008566736098023041 0.0 28-29 0.0 0.0 0.0 0.01578727080921389 0.0 30-31 0.0 0.0 0.0 0.03836673952471748 0.0 32-33 0.0 0.0 0.0 0.10023081234686959 0.0 34-35 0.0 0.0 0.0 0.17115114904407464 0.0 36-37 0.0 0.0 0.0 0.2872916141444156 0.0 38-39 0.0 0.0 0.0 0.4850608360644904 0.0 40-41 0.0 0.0 0.0 0.7130583982161608 0.0 42-43 0.0 0.0 0.0 0.9236165333111415 0.0 44-45 0.0 0.0 0.0 1.1440876058909772 0.0 46-47 0.0 0.0 0.0 1.3958272652285972 0.0 48-49 0.0 0.0 0.0 1.6667808898146403 0.0 50-51 0.0 0.0 0.0 1.9466072053593502 0.0 52-53 0.0 0.0 0.0 2.210646250094846 0.0 54-55 0.0 0.0 0.0 2.472298846917321 0.0 56-57 0.0 0.0 0.0 2.7613038082813413 0.0 58-59 0.0 0.0 0.0 3.079190908490125 0.0 60-61 0.0 0.0 0.0 3.4110295503442605 0.0 62-63 0.0 0.0 0.0 3.7426846192820094 0.0 64-65 0.0 0.0 0.0 4.061489584072724 0.0 66-67 0.0 0.0 0.0 4.407952868265628 0.0 68-69 0.0 0.0 0.0 4.790702398930871 0.0 70-71 0.0 0.0 0.0 5.191074929569192 0.0 72-73 0.0 0.0 0.0 5.620329599052274 0.0 74-75 0.0 0.0 0.0 6.041996587991394 0.0 76-77 0.0 0.0 0.0 6.468314090812298 0.0 78-79 0.0 0.0 0.0 6.933610242879206 0.0 80-81 0.0 0.0 0.0 7.436477651833159 0.0 82-83 0.0 0.0 0.0 7.978629664893761 0.0 84-85 0.0 0.0 0.0 8.515641636295548 0.0 86-87 0.0 0.0 0.0 9.042434715351835 0.0 88-89 0.0 0.0 0.0 9.630602339453247 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1085 0.0 39.450676 1 GGTATCA 560 0.0 39.067127 1 TACGATC 55 0.0025857016 34.5277 4 TCAACGC 1210 0.0 33.350616 4 ATCAACG 1220 0.0 32.688107 3 ACTACGC 70 0.008403715 27.133886 8 CGCAGAG 1570 0.0 26.917852 8 GTACATG 2730 0.0 26.30607 1 ACGCAGA 1625 0.0 25.709854 7 TACATGG 2795 0.0 25.13913 2 TATCAAC 1620 0.0 24.910028 2 ACATGGG 2670 0.0 24.893566 3 CAACGCA 1635 0.0 24.681498 5 AACGCAG 1710 0.0 24.154245 6 AATGCGG 185 2.552406E-7 23.09623 7 ATGCGGG 190 3.2950084E-7 22.492563 8 TCGCACC 475 0.0 22.027782 1 GCAGAGT 1930 0.0 21.668114 9 CATGGGG 1705 0.0 20.883688 4 AAATGCG 205 6.858063E-7 20.84294 6 >>END_MODULE