FastQCFastQC Report
Fri 10 Feb 2017
SRR2568602_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2568602_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135
Sequences flagged as poor quality0
Sequence length101
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32.2222222222222223No Hit
ACGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGT10.7407407407407408No Hit
ATCAACGCAGAGTACATGGGGAGAGAGGTTTGGTCGTTCGTTGGTGGAGT10.7407407407407408No Hit
CCGGATCTCTGGGAAAAACACAATTTTGCCTTTTGGTACTTCTAGTTGAG10.7407407407407408No Hit
GAAAGAAGCAATGGACGGCTGAAGTTGCTGCCCTCAGGCCCGGATGCGGT10.7407407407407408No Hit
CAATAACTTAGTAGTACTTGCTTAGTTATAAATAACTGGATCTTTCTGCT10.7407407407407408No Hit
GTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTGGGTTAA10.7407407407407408No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCGGGTTT10.7407407407407408No Hit
TTCTCTAAGTGCTGAGATAAAGGCATGCACCACCACTGCCCGGCTATAGG10.7407407407407408No Hit
GTTTTTATTGTCTGTGGCAGACGTACAGCCAGACATGGTCCTCTTTCAAC10.7407407407407408No Hit
CTCACAACTTCAGAGAGCTAATTATAGCTCGAGAGATTTCTTTTCAGGCA10.7407407407407408No Hit
TATTTCACATGTGCAGAAAGTTGGTCAGTAGATAACTTTGTGGAGTTGGT10.7407407407407408No Hit
GAGGACATGGGGGCTCCGCTTCCAGGGAGGCTCTCAGCGATACGTGCCCG10.7407407407407408No Hit
TCCAGACCGTCTTCATCTTTCTAACGGATTCATACCCGATGGACCCGTGG10.7407407407407408No Hit
GTAATATTCATTCACTTAAAATATGAATGCAGATGCCACATCTTATATTT10.7407407407407408No Hit
CAATGAGATGGCACTTTAGAGACCGCAGCTTCAGGAGAGGGCGATGAGAT10.7407407407407408No Hit
CCACATGTGGTGTTGCATGCCGTTGATCTCCCAGCAATTGGGAGGCAGAG10.7407407407407408No Hit
ACTCATCTCTGAAGACTGACTTTGCTCGTAATTTTTTTATAATTGGCCAC10.7407407407407408No Hit
GACGGAGCCTCTACCTGCTGTGGCTAGGACTGCGAACAGTAGAAGTACTC10.7407407407407408No Hit
CCTAGGACCAGTCTCGGCCGACTCTTCGCGGTTAGATCCTCCTCCGGATC10.7407407407407408No Hit
TCAGGCACCAGCTCCACAACACCCCACCGTAGTCACCAACACACCTACCA10.7407407407407408No Hit
GCTCTAGTTGTTTATTTATCATCATCATCATCATCATCATCATCATCATC10.7407407407407408No Hit
GACTAGCCACCTTCGGACCACTGGGGTAATCCATTCATATTTTTGGATAG10.7407407407407408No Hit
CTATGTGTGTGGCCAGAACCCTGAGCTACACAGGCCACCTGGCCAGCCTT10.7407407407407408No Hit
GAATAATTCTCTTCAAAGAAAAGGCTAAGGAAGCACTTGAGAAAGCCAGA10.7407407407407408No Hit
CTCCAGAGTGCTTGCAGAGTTTGAGAAATGTGAACATGCTGTGGGGCTGA10.7407407407407408No Hit
GTGTTCTTTTGTTAAAACAATGAGAGCAAAATAACTTACTGAAATATAAA10.7407407407407408No Hit
AAATTATTTTTTGTGTATGTGTAAGTAATGGAAGTGGGAAGTATGTTTCT10.7407407407407408No Hit
GGGTTAGTTGAGACTGCTGGTCTTTCTATGGAGTGACTCTCCCTTTCAGC10.7407407407407408No Hit
CTCTGACTACCCTCCACTTGGTCGCTTTGCTGTTCGTGACATGAGGCAGA10.7407407407407408No Hit
AGATACAATGACAGCCTTTGCATCAGTAACACACATTTGTCGAGACGTAA10.7407407407407408No Hit
GTATCAACGCAGAGTCATGGGGAACCCCGCCTGTTTACCAAAAACATCAC10.7407407407407408No Hit
TTGTGTAATAGAGCAGAGGAAATGCAAAGGGCTGTCAGACATTCAAGCTC10.7407407407407408No Hit
ATCCATCGCCAGACTACACTAAGGAAGGATTACATGGTTTCAATTCTGCT10.7407407407407408No Hit
TCATAATAATGAACCTGAATTTTCAAAATGCCACCCACCTGTGTGGTGGA10.7407407407407408No Hit
GACTACTACAGGAGTGCTTGGGAAGAGGACTACCAGGGTCCTCACAGGCC10.7407407407407408No Hit
CAATGGTACTTCAGCAGCACTTCGTGAACATGGGGTGATTGGAAAACTCT10.7407407407407408No Hit
TGCTAGCTGGTTGCTCTACTATTTGCGGGAGATGTATAATATACAGACAA10.7407407407407408No Hit
ATCCCACCTACATCAGTCAGAATGGATAAGATCGAACCCTCAGGTGACAA10.7407407407407408No Hit
CATAAGGACTTTGGGCCGCACAGCACGAACCCCTCGAAGTCTGCCTGGGC10.7407407407407408No Hit
GATTGATTAGACTTTCTAAAGTCTACACAGAGTAAAAGAAATAGACACTA10.7407407407407408No Hit
TCATTCCCCTTAGTACACAACAAATTTATTTTTAAAACCATAATCTGTAA10.7407407407407408No Hit
TCTTTGCTCCCTGCTGCCACCAATGTGGTGAATTCATCATTGGCAGGGTT10.7407407407407408No Hit
TTCTTTGTCCTCCATGCTAAGAGATGTAAAAGCTTAAGGGCCAAACAATA10.7407407407407408No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.7407407407407408No Hit
AGATCCTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACCCCAC10.7407407407407408No Hit
GTTTACTCCAGACTGCATGTTATTGCGAGCAGGAACAAAGATCCTGACTT10.7407407407407408No Hit
ATCCGAACTTCAGCAAATGGTTTGCTAGCGGCATCTGTTTTCTGGTTTTC10.7407407407407408No Hit
AGGTACAGCAATACCACATTTTACACACACATTAAAAAAGCAAAAGAAGC10.7407407407407408No Hit
AACCTGGTCTGTCATTGATAGGGAACTGCAGTTGGTACCTATTTGGGACA10.7407407407407408No Hit
GTAAAAGGACTGTAAAGGGAAAAAGCACGGCTTCCTTGGGTTCTAACGAG10.7407407407407408No Hit
GACTTATACAAAATGCAAGAAATCCTTCCTGACTAAGAGTCCAACAATCC10.7407407407407408No Hit
AACTAAGGATTTCCTTGAACTCAGAGATTCATCTGCATCTGTCTTACAAG10.7407407407407408No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGTTTTTT10.7407407407407408No Hit
GTCTTAAGTAGTGGGGCTTCTAGAGGGTTAAGGGGTGAAATTCCTGTTGG10.7407407407407408No Hit
AAACACCACCCTATACAATCCACTGTTAGCAGTAAGTACAACAGCAAAAA10.7407407407407408No Hit
CTGGGAGGCAGCCCAGCACCCACTGCCCGTTTCTCCTCCCTTCACTGGTT10.7407407407407408No Hit
GATCGAACGTCATCCCTTGTGATCAGTTATGCCTCTGTGGCTGGGGGGGA10.7407407407407408No Hit
GTAATGGGGCTTCCTGCCTTGTCCCGCACCTTTCGCGACATGGGGAAGAG10.7407407407407408No Hit
GGCTTTATTTTCTTATTTACAGTTGGTGGTCTAACCGGAATTGTTTTATC10.7407407407407408No Hit
ACAGAGTGCGGTCCACGAGCACCTGGGCCACACAGGGAAACCCTGCCTTG10.7407407407407408No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCAGCAGTGG10.7407407407407408No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCCTTTTTC10.7407407407407408No Hit
AGTCAGTGAAACGCCGGCGGGGTCGGGAGAACCGGGGGCCCCGGGCGGGA10.7407407407407408No Hit
CCAGCTAACTTCATATTCTTGACTCTTGTAAAACTGCTTGCTTGCCCCTG10.7407407407407408No Hit
ACATGGGAAGCAGTGGTATCAACGAAAAAAAAAAAAAAAAAAAAAAAAAA10.7407407407407408No Hit
GTCAAAATATAGTTGGGGTTTAATCTCGTTGGGTTTCAGATGCAGACGAA10.7407407407407408No Hit
ATGGTGGTCTTGGTCTGAAGTTGCGGGAAGTAGCTGGAGTTCTGACACAC10.7407407407407408No Hit
GATTAGAGGACGTTGAAATGAATGATTTCTATGCGGAGTTTGTGGTGGTG10.7407407407407408No Hit
CTGTAGCACTGGGGCTGTTTGGCTTGTTCTGTGTTCGAATCTTTCCCTCC10.7407407407407408No Hit
GTGTGCTGATGGTTGGCCCACCTGGCACTGGAAAGACCCTTCTAGCTAAA10.7407407407407408No Hit
AGCTAGATGAGCGGCGCAAAAGGGGGCAAGAAGAATGGGGGAAAGTTCGA10.7407407407407408No Hit
CATCATGATCTTTATAATTTGAGAGGCCTTTGCTTCAAAACGAGAAGTAA10.7407407407407408No Hit
ATGTAACCCGTCCAAATTCTTCACGGGAATCACGGCCTGGGGGAACCCTC10.7407407407407408No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGCTTTTTCCCC10.7407407407407408No Hit
GCGAAGGTCTATTTATGATGTCACAATGATGTGAAGTTCAATGAAAATCT10.7407407407407408No Hit
GACATACTCAAATGATTTTAGTATTTGGAAAGACTGTAGAGGATTGTGTC10.7407407407407408No Hit
AAAGTCTACTTTTGATCCCAGAGGGCACCAAGCATGTACAAATTAACAGA10.7407407407407408No Hit
GGCTCTACCTATGAAAAAGACAAAGGGAATCCAAAGGCCTTGTACCCTCA10.7407407407407408No Hit
GATTGAAAACCTGTTTGAAACAGACTGTGTAGGAAAAATCAGGATTAAAG10.7407407407407408No Hit
GATTCCTTTTCCTCTGGGAAGAGAGATCCATGGTTTGTTACCCTTGCCAA10.7407407407407408No Hit
CACTATTAGGAGAATACAGCACTATAGGCTGGTCGGAGGGATGCAGGCCT10.7407407407407408No Hit
ACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGC10.7407407407407408No Hit
GTGTAAAATACCTGCTTTCTTCTATCATTAAACCCTGGAAGAATGAAAGT10.7407407407407408No Hit
AAAAGAAATGATCTATTCGCTACTCTCTTCGGTACTGCTGTTATACAAGC10.7407407407407408No Hit
GCTCGGGGTATCGGCTTTGCTTGTTACTGGGGACAACACCTCCATCGCTC10.7407407407407408No Hit
CTGCAGCACCACTCTGCTCCCACTTGCGTCGGGTGATCTGCGCCGCCATG10.7407407407407408No Hit
AAAAAATACAATCAAAGAGGGTGTTAGCATTCACCAAAACTAGTGGCCTC10.7407407407407408No Hit
CCCCGGTGGGGCCAACCTCGCCCCAGGCATTGCGGACAGGATGCAGCACC10.7407407407407408No Hit
GTTCTTAACCTCTTTCCTAGGTTTTCCATTTCCAGGGTTGCCTCTATTTG10.7407407407407408No Hit
CATATACATGGTATAAGAAAAACCGCAGACCCTTTTCAGATCCCAAGTCT10.7407407407407408No Hit
CAAGCCCGGGCCTCCTGGGGCGCACGGACCGGGGGCGGGCGACCCCTGCA10.7407407407407408No Hit
AAACAGTGTCAACACAGTGGAACAAGTGATGTAATTATCTACCCAGGCAC10.7407407407407408No Hit
TGTTTGTGATCAACAATAACCCTTTGGTAAGATTTTTGTCTTGTTGAAAT10.7407407407407408No Hit
GTAGTCTTCATTTACCCACAACTGGGTAAAATGACAAAAGTGTCAGTTTA10.7407407407407408No Hit
GAGTACATGGGCTTCAGTTCCGAAAACCAAAAAAATAGAACCGCGGTCCT10.7407407407407408No Hit
TTTTTATATTCAGTAGACAAGAAGGCTTCATTAGTTTGTCTCCTCCACAC10.7407407407407408No Hit
TAGAGAGACTGGACCTTTAAACGAGGGAAACTACGTATAATGAATAAATT10.7407407407407408No Hit
ACTGTAAACATTGCGGAATTTTTTTTTGTCCTTGTTTTATTGACAATGCT10.7407407407407408No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCCCTTT10.7407407407407408No Hit
GGGTTAAAGAGTATTTCTGGCACAGCAAATCTCTCGTTGGCAAGGCGAAG10.7407407407407408No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7407407407407408No Hit
GTGAGGGGATTCTGCTCCCAGTTTCCATCCTGGCCTTAGATGTCTCCAAT10.7407407407407408No Hit
GTACATGGCTGACACTAAGCTGTTTGTATGAGGTTTGTTTTGTGACCAAG10.7407407407407408No Hit
TTTCAAGGGTTGTCCTTTCCGTGTTGTGTCTGTCATAACAGGAAGTTATG10.7407407407407408No Hit
GTGCAGGGCCTGCTCTGTGATGTCGAGCACTTCAGGGTTATAAATGCTGC10.7407407407407408No Hit
CTATTAAAGAGTCAGACATTATTTACAAAAAAATTGCTCTAACGAGTGCT10.7407407407407408No Hit
TCTGACGCTGCCGACGGAGAGGCCCGCAGTGTCCGTCCTGGGGCTCTGGG10.7407407407407408No Hit
GGCGAATTGTCAAACCCACCAGATAACTACTTGCAACAGTGACCAAGACC10.7407407407407408No Hit
TTAATATACGGATTGGAAGTTCTATTGGCAGAACGACTCGGTTATCAACT10.7407407407407408No Hit
GTCTTGAACTTGTGGTCTTTCACCTCATCTCCAGTGGAGATGCTGGTCCT10.7407407407407408No Hit
GAGGTAAGGAGCTCTTGCTTCACAGAACTCTCTCCCTGTTACCGGCACGC10.7407407407407408No Hit
GAAAAGATCCCCTCTGAAGTTATTCACTGTGTCGAAGACTTTTTACCTTA10.7407407407407408No Hit
CCTCCACCCTCCCTGGACATGTTTGCTGAGGAAGTAGCAGAGGGTGAACT10.7407407407407408No Hit
GTCTAACCCAGATACTTGGAGCTTACTATCTACACTTTTCTTCTTCTTTA10.7407407407407408No Hit
GTGGTAGAGGGTCTCCTTGTCCGGCAGACAGCCTGGGAGGAGATTGGGGC10.7407407407407408No Hit
GCTCACGGTGGGGCCGTCCCGGTACTTGGTGGGGAAGGCCTGGCTGCGCG10.7407407407407408No Hit
GCCTGAGCCCTGCAGTCATTGTCGGCCTTCTGAGAGAAGCATCTAAGCAG10.7407407407407408No Hit
GTACGATAAAGATATCATCATGCTTCAGATTGGAGCATCTATAATGGATC10.7407407407407408No Hit
CTCTTACACTGTGGCTAAAACTTGTATCTTCACCCTTTGAAAAAGACCAC10.7407407407407408No Hit
CCGGGGGGGAGCCTGGGGGGGGGGTAGGCTGGACCTGCGCGTCGTTTTGC10.7407407407407408No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTT10.7407407407407408No Hit
GTGAAGGTCCCAGGTGTGAAGAGGCCAGCGATCGGAGTGGCTCCTGTGGC10.7407407407407408No Hit
GTCTAAATGCTTGTTAGAAGGAGAAGATTCACTTTTAAAACCCTTACAAA10.7407407407407408No Hit
GGTATCAACGCAGATTACATCTGAAGGAGTGGGATCAACTCACAAAAAAA10.7407407407407408No Hit
TTCATCAGTTTCTCGGCATGCTCCCTCTCCTCATGAGATTGGTGGAGAAA10.7407407407407408No Hit
GCTTTAAGACCCTCATCCTAGCTGCCTAAAAGCCAGTATTCTGCTAGCAG10.7407407407407408No Hit
CCTGTTCCCCGGGTGAACCCCTGGGACATAATTCTGTGTATTTCTTGATC10.7407407407407408No Hit
GTATATGGGAAGCAGTGGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7407407407407408No Hit
GCTAAGTGCCTGAACATCAGCACCTTGGTCCTCAGCATCCTGATGGTTGT10.7407407407407408No Hit
CTTCTTGCCTGGTCCTGTGGCCTTCTTGGCTGGGACTTTAGCTTTAGCAG10.7407407407407408No Hit
CTGACTGACTATCGTGGGGAATACTTGGTTTTTTTCTTCTACCCACTGGA10.7407407407407408No Hit
TATCAGGGTATTGACTTTGGCCACATCGATGTCATAGAGTTTCTTGACAG10.7407407407407408No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers