Basic Statistics
Measure | Value |
---|---|
Filename | SRR2031661_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2693173 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 4385 | 0.0 | 32.38933 | 4 |
GGTATCA | 2965 | 0.0 | 32.216133 | 1 |
ATCAACG | 4520 | 0.0 | 31.737812 | 3 |
CAACGCA | 4575 | 0.0 | 30.936354 | 5 |
GTATCAA | 4825 | 0.0 | 30.532785 | 1 |
AACGCAG | 4820 | 0.0 | 29.560934 | 6 |
ATCGCGA | 35 | 0.008398951 | 27.139755 | 66-67 |
ACGCAGA | 5315 | 0.0 | 26.807848 | 7 |
CGCAGAG | 5265 | 0.0 | 26.701601 | 8 |
CATCGCG | 45 | 8.957827E-4 | 26.385872 | 66-67 |
TATCAAC | 5820 | 0.0 | 24.649069 | 2 |
ATACGAC | 125 | 2.2564728E-4 | 22.800781 | 3 |
GTACATG | 5905 | 0.0 | 21.487871 | 1 |
GCAGAGT | 6465 | 0.0 | 21.3046 | 9 |
ACATGGG | 5685 | 0.0 | 20.721905 | 3 |
CATGGGG | 2410 | 0.0 | 19.118555 | 4 |
TACATGG | 6485 | 0.0 | 19.118202 | 2 |
GTAGGAC | 1170 | 0.0 | 18.269855 | 3 |
CTCGCGC | 80 | 0.0011927034 | 17.810463 | 60-61 |
TAATACT | 2620 | 0.0 | 17.767454 | 4 |