Basic Statistics
Measure | Value |
---|---|
Filename | SRR2031623_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1241521 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1835 | 0.0 | 27.502644 | 1 |
GTACATG | 3095 | 0.0 | 27.074266 | 1 |
GTATCAA | 2490 | 0.0 | 26.195452 | 1 |
TACATGG | 3210 | 0.0 | 24.304811 | 2 |
ACATGGG | 3100 | 0.0 | 24.218102 | 3 |
TCAACGC | 2635 | 0.0 | 23.804308 | 4 |
TATACCG | 100 | 0.0016499842 | 23.759226 | 5 |
ATCAACG | 2655 | 0.0 | 23.624037 | 3 |
CAACGCA | 2725 | 0.0 | 23.01811 | 5 |
CATGGGG | 1925 | 0.0 | 22.956966 | 4 |
AACGCAG | 2875 | 0.0 | 21.975351 | 6 |
TATCAAC | 2970 | 0.0 | 21.463562 | 2 |
CCTATAC | 430 | 0.0 | 20.995678 | 3 |
ACTGCGT | 205 | 6.8258305E-7 | 20.855022 | 8 |
TAGACGT | 115 | 0.0037150716 | 20.660196 | 5 |
CGCAGAG | 3100 | 0.0 | 19.920658 | 8 |
GAGTACA | 2495 | 0.0 | 19.654922 | 1 |
ACGCAGA | 3190 | 0.0 | 19.654873 | 7 |
CCTAATA | 470 | 0.0 | 19.231325 | 2 |
AAGACCG | 200 | 1.28057E-5 | 19.00738 | 5 |