Basic Statistics
Measure | Value |
---|---|
Filename | SRR2031616_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1921648 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1900 | 0.0 | 33.59543 | 1 |
GTATCAA | 3110 | 0.0 | 26.957605 | 1 |
TCAACGC | 2735 | 0.0 | 26.940619 | 4 |
CAACGCA | 2900 | 0.0 | 25.571712 | 5 |
ATCAACG | 2930 | 0.0 | 25.470135 | 3 |
AACGCAG | 3075 | 0.0 | 24.416044 | 6 |
GTACATG | 4600 | 0.0 | 24.128323 | 1 |
ACATGGG | 4365 | 0.0 | 22.759424 | 3 |
CGCAGAG | 3460 | 0.0 | 21.150433 | 8 |
ACGCAGA | 3585 | 0.0 | 20.942085 | 7 |
GTATAGG | 1090 | 0.0 | 20.539997 | 1 |
TACATGG | 4910 | 0.0 | 20.354404 | 2 |
TATCAAC | 3705 | 0.0 | 20.295017 | 2 |
CATGGGG | 2290 | 0.0 | 19.92824 | 4 |
ACGACTA | 120 | 0.004743137 | 19.807146 | 5 |
GACCGTC | 120 | 0.0047545996 | 19.798887 | 7 |
GTATAGC | 675 | 0.0 | 19.759832 | 1 |
GTACGAC | 130 | 0.007534288 | 18.282091 | 3 |
GAGTACA | 3670 | 0.0 | 18.041712 | 1 |
GTCGCCG | 675 | 0.0 | 17.943972 | 94-95 |